Sfla006840.1
Basic Information
- Insect
- Scaptomyza flava
- Gene Symbol
- CSRNP3_1
- Assembly
- GCA_003952975.1
- Location
- RKRM01000025.1:398224-404782[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.2 3.3e+03 -2.4 0.1 79 108 157 186 133 202 0.58 2 2 3.6e-100 5.9e-96 320.4 13.6 2 218 305 518 304 518 0.91
Sequence Information
- Coding Sequence
- ATGAGGAGCATGTTCCGTCCGATCAAGAAGATTTTCACGTACATTCAGAAAAATGCCAGCAATGGTACAATGTTTGGCACAACAACTAGCATAATAAAGCCGGAGGTTGATGGTGCCGCCTCAAGCACTAGTGGCATCCACCTGGCGGTGGAGGATGAGCTGAATCAGCTGCCAGTAAAGCAGGAGGTAGAGACGGAACAACTTCTCCACCTGGATGATGAGGATATTGAGCGTCAAATAAAAACATCCATCATCGATGCCAGCAAGGTGCATGCAGCCAAAGCCAAACTTGTGCTGCCCCTGCATCTGCTGGACGATGAGCTGGCGGACTTTGCGCATGAACCTATAGGGCTGTCGAACGTTGTTGTAGGAGAGGAAGGGGACGACGATGATGACCTAGAAGAACATTTTCTGGAACTGGAGAATTTTCCCAACAATGAAATCATAGTGCTAAGCGATCAAGATCTTAACTCATCACTTGCCTCTGACAATATATCCGAGGATCCGCTCGCCATAGATGATTTTGGGCAAAAGGAGGCTGAcgaggaagaggaggaggcTGACAGCAGCGGCGACTTGATGTGGCTGAAACTCGTCACGCCAACCACCGTCAAtagcaacaccagcagcatcagcagcgtTCTTCCCGTTCCTGGGTGCAGTAGCTCTTTAATAGCTTCGACTACTGCAGCAGCTTCATCCGTTAAGCCACCCATACGGCGGAGAGAGGAAGAGCTGCGCAGTGATGGTGGCTCTGATTCAGGCCTGGGCAGTGAGAATGATAGACAAAacatcacaacaacaacaagcttgCATAAGCCTCTGCGATCAAATTTGAAACGTCGTCTGGATGATGATGCCATGGATTTGGCATTGCTGCCCATCTCAAGCTGCTCCAACGCACAGAAGCGACCGAAGCGTAGCATCAATTTTGATAACGTTAAAGTCTACTACTTTCCCAGGCAACAGGGCTTCAGCTGTGTGCCGACCGCCGGCGGCTGTACGCTTGGCATGGGTGCCCGGCATATTGCCTTCAAGACCATGACCTTGGCGGAGCATGCATCAGAACTGCGGCGTGCTCATCGTAGCCAAAACCAAGAGctccagcagcaacatcaccaacaacagcagcagctgcaagcGCGAGGTTCCAGCAGCGATGATAGCGAGGAGTCCGAAGAGGATTATCTGAGCGATGGGAGCGGCTCCGACGCTGACGATGGCTCCAATGGCTTCCTACAGCCGGTGACGCCCAAGCAGCGTCGTGTCCTGCTCAAAGCAGCTGGCGTGCGCAAGATCGATGCCAGCGAGAAGAGCGATTGCCGGGATATACGCAACTCGCGCGAAGTGTGCGGCTGCTCGTGTCGCGAATTTTGCGATCCGGAGACATGCGCCTGCAGCCAAGCGGGCATCAAATGTCAAGTGGATCGCGCCATGTTCCCCTGCGGCTGCACGCGTGAAGCTTGTGGCAACACTGTCGGTCGTGTTGAGTTCAATCCAACGCGGGTGCGCACTCACTACATACACACTGTGATGCGTCTGGACATGGAGCAGCGTCAGAGTCAGGGACAATCGTcggcaaacagcagcaatggTTTAGTCTACGGCAGCAGCATCTCTGGCAGCAGCGCTTCAGGCGTCGTATCACCTTCTGCATCATCAGGCGCCTCCTCCACACACTGCTTCTTCATGCAACCGCAGTCGAACTACAGCTCTGGCTATGCCTCGCCAGCGTACACGCCCGAGACAAGCGTCAGCTACtatcagcagcatcaacaaacGCCTCTCAGAACACAGACTCCACCTGGTTCcacaggcaacagcagcaccacgCAGCAGTCTAGCTATGCCACTATCTATCCACAGTTGGACAGCCTTGACGCAGGCCTATTTGCCACCGGTAGCAATGCCACGCCCTCCTACGGTGAGCTGCTAACGCCCACGTTtcatcaaaccctcagctatGGCAGCACTCAGCTCAACTCTTACGGCTCTTATCAGCAGACAACGACAGCTTCTGGAGGCAATGCGTCGCCTGTTGGCTATAGCTCGTGTGCGGTGCCATCAGTGCCGCCATTTGGCATTGCCACAACCACTGCCTCGAACGTTACGCAATATCAGCATGTTAATGTGTTAGAaaccaccgccgccaccatgattagaagcagcaacagcagcatatCTTTAACGGCCAGCAGCTGTGCCACTGGTCTGGCACGCCTCGGTGGCGCTGGACCTGTTGATTTCATTAGATTGAATGCGCCCATCAGCAGTTCGTCGCGTTTGTCGCAGATCAATGATCTGTTGCAACACAATCGTAGTACCACCGCCGCTTTGGTTGCCGTCTCCGAGGGCTATGCCGCTGTgcgcagcagcagtagcaccACCACTACGAACACGAACAATACTAGCACCACCATTGATTCAATTGACACGCCACCCATTGTAGAGGAGGCGCAGCGCAGTTGCATGACCTTTGAGGGGCTGCCACCGCCGCTAATAAATCCCACACCAATTGTCGCTGTTCTTGAGCAGCCGCACAAACAGCTTATGGATGTGTCCACAACGCCGCAGCCACGCCAGCCACTGGATGTCAGCGCCACTCTGACTGAGTCTTTATCGAGCAGAAGCAACTAA
- Protein Sequence
- MRSMFRPIKKIFTYIQKNASNGTMFGTTTSIIKPEVDGAASSTSGIHLAVEDELNQLPVKQEVETEQLLHLDDEDIERQIKTSIIDASKVHAAKAKLVLPLHLLDDELADFAHEPIGLSNVVVGEEGDDDDDLEEHFLELENFPNNEIIVLSDQDLNSSLASDNISEDPLAIDDFGQKEADEEEEEADSSGDLMWLKLVTPTTVNSNTSSISSVLPVPGCSSSLIASTTAAASSVKPPIRRREEELRSDGGSDSGLGSENDRQNITTTTSLHKPLRSNLKRRLDDDAMDLALLPISSCSNAQKRPKRSINFDNVKVYYFPRQQGFSCVPTAGGCTLGMGARHIAFKTMTLAEHASELRRAHRSQNQELQQQHHQQQQQLQARGSSSDDSEESEEDYLSDGSGSDADDGSNGFLQPVTPKQRRVLLKAAGVRKIDASEKSDCRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVGRVEFNPTRVRTHYIHTVMRLDMEQRQSQGQSSANSSNGLVYGSSISGSSASGVVSPSASSGASSTHCFFMQPQSNYSSGYASPAYTPETSVSYYQQHQQTPLRTQTPPGSTGNSSTTQQSSYATIYPQLDSLDAGLFATGSNATPSYGELLTPTFHQTLSYGSTQLNSYGSYQQTTTASGGNASPVGYSSCAVPSVPPFGIATTTASNVTQYQHVNVLETTAATMIRSSNSSISLTASSCATGLARLGGAGPVDFIRLNAPISSSSRLSQINDLLQHNRSTTAALVAVSEGYAAVRSSSSTTTTNTNNTSTTIDSIDTPPIVEEAQRSCMTFEGLPPPLINPTPIVAVLEQPHKQLMDVSTTPQPRQPLDVSATLTESLSSRSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323364;
- 90% Identity
- iTF_01324098;
- 80% Identity
- -