Spar009217.1
Basic Information
- Insect
- Scaptomyza parva
- Gene Symbol
- CSRNP3
- Assembly
- GCA_035044645.1
- Location
- JAWNNT010000101.1:12467098-12469813[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.24 4.1e+03 -2.6 0.5 38 76 56 94 42 148 0.52 2 2 5.9e-99 1e-94 316.5 13.2 2 218 309 522 308 522 0.90
Sequence Information
- Coding Sequence
- ATGAGGAGCATGTTCCGTCCGATCAAGAAGATTTTCACGTACATTCAGAAAAATGCtagcaacaaaacaatgttTGGCAGCGCAATAAAGCCGGAGGATGATGATAGCGTCGCCACAAGCAGCAGTGGCATCCACCTGGAGCAGGTAGCGGatatgcagcagcaacggcatcCACCAAATCAGGAGGTGGAGACGGAACAACTCCAACTGGAGGATGAGGATATTGAGCGTCAAATAAAAACATCTATTATTGACGCAAGCAAGGTGCACGCAGCCAAGAAAATGGTGCTgccactgcaactgcagctagACGATGAGCTGGCGGACTTTGCCCATGAACCCATAGGGTTGTCGAATGTTGTTTTGCGCCAGGCGGAGGAGGAGGACGATGATGATCTGGAAGAACAGTTTCTCGAGCTTGAGAATTTTCCCAACAATGAGATTATTGTACTAAGTGATCAAGATCTTAACTCATCGCTTGCCTCTGACAACATATCGGAGGATCCGTTGGCCATCGATGACTTTGGCCAAAAAGAAGCTGAagacgaggaggaggaagcTGACAGCAGCGGTGACTTGATGTGGCTTAAATTGGATACGCCAACTCCTTTAAATGGCATCGctagcaacagcagtagcagcgtTCTTCCCGTTGCAGGCTGCAGCAGCTCTTTACAAGCttcgacaacagcaacagctactcCCGTTAAGCCACCCACACGGCGAAGAGAAGAGGAACTGCGCAGTGATGCTGGCTCCGATTCGGGCCTAGGCAGTGAAAATGATAGACACAacatcacaacaacagcaacaacaacatgtttgCAAAAGCCGCTTCGCTCGAATTTGAAGCGTCGTCTGGTTGATGATGCCATGGATCTGGCATTGCTGCCCATCTCAGCCTGCTCCAATACGCAGAAGCGCCCCAAGCGTAGTATCAATTTTGAAAACGTCAAGATCTACTATTTTCCACGGCAACAGGGCTTCAGCTGTGTGCCCACGGCTGGCGGCTGTACCCTGGGTATGGGCGCCCGGCATATTGCCTTCAAGACCATGACATTGGCGGAGCATGCATCCGAACTGCGGCGCGCACATCGTAGCCAAAATCAGGATTTgcatcagcagcaccagcaacaacagcagcagctgcaagcGAGAGGTTCCAGCAGCGATGATAGCGAGGAATCAGAAGAGGATTATCTCAGCGAGGGCAGCGGCTCTGATGCGGACGATGGCTCCAATGGCTTCCTGCAGCCTGTGACGCCCAAGCAGCGGCGTGTCTTGCTCAAAGCAGCGGGCGTGCGTAAGATAGATGCCAGCGAAAAGATCGATTGCCGGGATATACGCAACTCACGCGAAGTGTGCGGCTGCTCTTGCCGGGAGTTCTGCGATCCGGAGACCTGCGCCTGCAGCCAAGCTGGCATCAAGTGTCAAGTAGATCGCGCCATGTTTCCGTGCGGTTGCTCGCGCGAAGCTTGTGGCAACACTGTTGGTCGCGTGGAGTTCAACCCGACGCGTGTGCGCACTCACTACATACACACTGTGATGCGCCTGGACATGGAGCAGCGTCAGAGCCAGGGACAATCGTCGGTGAACAGTAGCATTAGCAATGGTTTGGTTTACGGCAGCAGCGTCTCTGGCAACAGCAATTCAGGCGTTTCATCACCATCTACAACAGCTGGCGTCTCCTCCTCCCATTGCTTCTTCATGCAACCGCAGTCGAACTACAGTTCCGGCTATGCCTCGCCAGCTTACACGCCCGAAACGAGCGTCAGCTtttaccagcaacaacaaacgacatCACCTGGTTCCACAGGCAACAGTGGCACGGGACAGCAATCCAGCTATGCCACAATCTATCCACAGTTGGATAGCCTTGATGCTGGCCTATTTGCAAGTGGTAGCAATGCCACGCCCTCCTACGGTGAGCTACTAACGCCCACATTTCATCAGACCCTCAGCTATGGCAGTACTCAGCTCAACTCTTACGGCTCGTATCAGCAGACAACGGCAACTTCTGGTGGCATTGCGGCGTCACCTGTTGGTTATAGCTCCTGTGCGGTGCCATCGGTTCCGCCATTTGGCAATGCCACAACCACCGCCTCGAATGCAACGCAATATCAGCATGTAAATGGATTGGAAACTACCGCCGCCACAATgattaacagcagcagcatcatatCCATAACTCCCAGCAGCTGTGCCACTGGCCTGTCACGTCTCGGTGGCGTTGGACACGTTGATTTTATTAGCCTGAATGCGCCCATTAGCAGTTCGTCGCGTTTGTCACAGATCAATGATCTGTTGCAGCACAATCGTAATACCACCGCCGCTTTGGTTGCCGTCTCCGAAGGTTATGCCGCTgtccgcagcagcagcaatagcactaccaccaccacgaaccacaccaataacaacaccaCTGATTCAATTGACACGCCACCTATTGTGGAGGAGGCGCAGCGTAGCTGCATGACCTTTGAGGGGCTGCCACCGCCGCTCATAAATCCAACGCCAATTGTTGCCGTTCTCGAGCAGCAGCCGCACAAGCAACTATTGTCTGTGACCACAACGCCGCAGCCACGCCAGCCTCTGGACGTCAGCGCCAGTCGAACTGAAACTCTATCtggtagcagtagcagcaactaA
- Protein Sequence
- MRSMFRPIKKIFTYIQKNASNKTMFGSAIKPEDDDSVATSSSGIHLEQVADMQQQRHPPNQEVETEQLQLEDEDIERQIKTSIIDASKVHAAKKMVLPLQLQLDDELADFAHEPIGLSNVVLRQAEEEDDDDLEEQFLELENFPNNEIIVLSDQDLNSSLASDNISEDPLAIDDFGQKEAEDEEEEADSSGDLMWLKLDTPTPLNGIASNSSSSVLPVAGCSSSLQASTTATATPVKPPTRRREEELRSDAGSDSGLGSENDRHNITTTATTTCLQKPLRSNLKRRLVDDAMDLALLPISACSNTQKRPKRSINFENVKIYYFPRQQGFSCVPTAGGCTLGMGARHIAFKTMTLAEHASELRRAHRSQNQDLHQQHQQQQQQLQARGSSSDDSEESEEDYLSEGSGSDADDGSNGFLQPVTPKQRRVLLKAAGVRKIDASEKIDCRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCSREACGNTVGRVEFNPTRVRTHYIHTVMRLDMEQRQSQGQSSVNSSISNGLVYGSSVSGNSNSGVSSPSTTAGVSSSHCFFMQPQSNYSSGYASPAYTPETSVSFYQQQQTTSPGSTGNSGTGQQSSYATIYPQLDSLDAGLFASGSNATPSYGELLTPTFHQTLSYGSTQLNSYGSYQQTTATSGGIAASPVGYSSCAVPSVPPFGNATTTASNATQYQHVNGLETTAATMINSSSIISITPSSCATGLSRLGGVGHVDFISLNAPISSSSRLSQINDLLQHNRNTTAALVAVSEGYAAVRSSSNSTTTTTNHTNNNTTDSIDTPPIVEEAQRSCMTFEGLPPPLINPTPIVAVLEQQPHKQLLSVTTTPQPRQPLDVSASRTETLSGSSSSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323364;
- 90% Identity
- -
- 80% Identity
- -