Stum010526.1
Basic Information
- Insect
- Scaptomyza tumidula
- Gene Symbol
- CSRNP3
- Assembly
- GCA_035044465.1
- Location
- JAWNNW010000642.1:213408-216191[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2 1e+04 -3.9 0.7 92 109 55 72 39 95 0.42 2 2 1.9e-99 1.7e-95 319.1 12.5 2 217 309 522 308 523 0.89
Sequence Information
- Coding Sequence
- ATGAGGAGCATGTTCCGTCCGATCAAGAAGATTTTCACGTACATTCAGAAAAATGCGAGCAACGGAACAATGTTTGGCACCGCAACTAGCATAATAAAGCCGGAAGATGAAGGCACCGCCGCGGCAAGCAGCAGTGGCATTCAACTGGAGCAGGAAGAGGAGCTGCAACTGAAGCAGGAGTTGGAGGGGGAACAATCACAACTTCAGCTGGATGATGAGGATATTGAGCgtcaaataaaaacatcaatTATTGATGCAAGCAAGGTGCatgcagccaaagcaaaacttgtgctgcccctgcaactgcagctggaCGATGAGCTAGCGGACTTTGCCCACGAACCTATAGGATTGTCGAATGTTGTTCTGCGAGAGCAGGtagacgacgatgatgatgatgatctcGAAGCACAGTTTCTGGAGCTAGAGAATTTCCCCAACAATGAGATAATTGTATTAAGCGATCAAGACCTAAACTCATCGCTTGCCTCTGATAACATATCTGAGGATCCGCTGGCCATAGATGACTTTGGACCAAAAGAAGCAGACGACGATGAGGAGGAAGCTGATAGCAGCGGTGACTTGATGTGGCTTAAACTGGACACGCCAACGGCTTTAAATAgcacaggcagcagcagcagcgttctTACCGTTCCAGGCTGCAGTAGCTCTTTACAAGCTGCGactacagcaacagccacaccCGTTAAGCCACCAACACGGCGAAGAGAAGAGGAGCTGCGCAGTGATGCTGGCTCCGATTCGGGTCTGGGCAGTGAAAATGATAGACATaacaccacaacagcaacaacaacaacaagtttgcAAAAGCCTCTGCGCTCGAATTTAAAGCGTCGTCTGGATGATGATGCCATGGAGCTGGCATTGCTGCCCATCACAGCCTGCTCCAATAGCCAGAAGCGACCAAAGCGTAGCATCAATTTTGATAACGTTAAGATCTACTATTTTCCACGGCAACAGGGCTTCAGTTGCGTGCCCACGGCCGGCGGCTGTACGCTGGGCATGGGCGCCCGGCATATTGCCTTCAAGACCATGACATTGGCAGAGCATGCATCCGAATTGCGGCGCGCACATCGTAGCCAAAATCAagagttgcagcagcagcaccagcaacaacaacagcagcagctgcaactgcgaGGTTCCAGCAGCGATGATAGCGAGGAATCCGAAGAGGATTATTTAAGCGAGGGCAGTGGCTCCGATGCTGACGATGGCTCCAATGGCTTCCTGCAGCCGGTGACGCCCAAGCAGCGGCGTGTCCTGCTCAAGGCAGCGGGCGTGCGCAAGATCGATGCCAGCGAGAAGATCGATTGCCGGGATATACGCAACTCGCGCGAAGTGTGCGGCTGCTCGTGCCGGGAATTCTGCGATCCGGAGACATGCGCCTGCAGCCAAGCAGGCATCAAGTGTCAAGTGGATCGCGCCATGTTTCCGTGCGGTTGCACGCGCGAAGCTTGTGGCAACACGGTCGGCCGTGTCGAGTTCAATCCGACGCGTGTGCGCACTCACTATATACACACTGTGATGCGTCTGGACATGGAGCTGCGACAAAGCCAGGGACAATCGTCGGCAAACATTAGCAACGGCAATGGTTTGGTCTACGGCAGCAGCGTCTCTGCCAACAGCACTTCTGGCGTCGTATCACCCTCTGCAACTGCTGGCGGCGCCTCCTCCCATTGCTTTTTCATGCAACCGCAATCAAACTACAGCTCGGGTTATGCCTCGCCAGCTTACACGCCCGAAACGAGCGTCAGCTATtaccagcaacaaccaacGCCTCTTGTAGCACAGGCGTCACCTGGTGCCACAGGCAACAGTAGCACGGCGCAGCAATCCAGCTATGCTACAATCTATCCACAGCTGGATAGTCTAGATGCAGGCCTTTTTGCCAGTGGTAGCAATGCCACGCCCTCCTACGGTGAACTGCTAACGCCCACGTTTCATCAGACCCTCAGCTATGGCAGCCCTCAGcTCAACTCATACGGCTCGTATCAGCAGACAACGGCAACTTCTGGTGGCATTGCGGTGTCGCCTGTTGGTTATAGCTCGTGTGCGGTGCCATCGGTGCCGCCATTTGGCAATGCCACAACCACCGCCTCAAATGCTACGCAATATCAGCATGTGACTGCATTAGAAACCACCGCCGCCACAATGATTGgtaatagcagcaacagcagcagcagcatatcCATAACAGCTACCAGCTGTGCCACTGGTTTAGCACGTCTCGGTGGCACTAGACCCGTTGATTTCATTAGCCTGAATGCGCCCATTAGCAGTTCGTCGCGTTTGTCACAGATCAATGATCTGTTGCAGCACAATCGTAATACCACCGTCGCTTTAGTTGCCGTCTCCGAGGGCTATGCCGCTGtacgcagcagcagtagcagcagcagcagcagtacaaACACCACCAGCAtgaacaatagcaacagcaccaCCATCGATTCAATTGACACTCCACCCATTGTGGAGGAGGCGCAGCGCAGCTGCATGACCTTTGAGGGGCTGCCACCGCCGCTTATAAATCCAACGCCCATTGTTGCCGTTCTCGAGCAGCCGCACAAACAGCTATTGGCTGTGACCACAACGCCACAGCCACGCCAGCCTTTGGATGTCGGCGCCAGTCGAACTGAATCCCTTTtgggaagcagcagcagcagcaactaa
- Protein Sequence
- MRSMFRPIKKIFTYIQKNASNGTMFGTATSIIKPEDEGTAAASSSGIQLEQEEELQLKQELEGEQSQLQLDDEDIERQIKTSIIDASKVHAAKAKLVLPLQLQLDDELADFAHEPIGLSNVVLREQVDDDDDDDLEAQFLELENFPNNEIIVLSDQDLNSSLASDNISEDPLAIDDFGPKEADDDEEEADSSGDLMWLKLDTPTALNSTGSSSSVLTVPGCSSSLQAATTATATPVKPPTRRREEELRSDAGSDSGLGSENDRHNTTTATTTTSLQKPLRSNLKRRLDDDAMELALLPITACSNSQKRPKRSINFDNVKIYYFPRQQGFSCVPTAGGCTLGMGARHIAFKTMTLAEHASELRRAHRSQNQELQQQHQQQQQQQLQLRGSSSDDSEESEEDYLSEGSGSDADDGSNGFLQPVTPKQRRVLLKAAGVRKIDASEKIDCRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVGRVEFNPTRVRTHYIHTVMRLDMELRQSQGQSSANISNGNGLVYGSSVSANSTSGVVSPSATAGGASSHCFFMQPQSNYSSGYASPAYTPETSVSYYQQQPTPLVAQASPGATGNSSTAQQSSYATIYPQLDSLDAGLFASGSNATPSYGELLTPTFHQTLSYGSPQLNSYGSYQQTTATSGGIAVSPVGYSSCAVPSVPPFGNATTTASNATQYQHVTALETTAATMIGNSSNSSSSISITATSCATGLARLGGTRPVDFISLNAPISSSSRLSQINDLLQHNRNTTVALVAVSEGYAAVRSSSSSSSSSTNTTSMNNSNSTTIDSIDTPPIVEEAQRSCMTFEGLPPPLINPTPIVAVLEQPHKQLLAVTTTPQPRQPLDVGASRTESLLGSSSSSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323364;
- 90% Identity
- iTF_01321179;
- 80% Identity
- -