Spol014515.1
Basic Information
- Insect
- Scaptomyza polygonia
- Gene Symbol
- CSRNP3
- Assembly
- GCA_035044585.1
- Location
- JAWNNU010001657.1:801128-803847[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.8 2.2e+04 -4.3 0.7 80 108 158 186 147 193 0.67 2 2 1.4e-99 3.8e-95 318.5 14.1 2 218 303 519 302 519 0.94
Sequence Information
- Coding Sequence
- ATGAGGAGCATGTTCCGTCCGATCAAGAAGATTTTTACGTACATTCAGAAAAATGCCAATGGAACAATGTTTGGCACAACAACTAGCATTATAAAGCCGGAGGTTGATGGCGCCGCCTCAAGCAGTAGTGGCATCCAACTGGCGCAGGAGAATGAGCTAGATCAGCTGCCACTTAAGCAGGTGGTAGAGACGGAACACCAACTCCAGCTGGATGATGACGATATTGAGCGtcaaataaaaacatcaaTCATTGATGCCAGCAAGGTGCATGCAGCCAAAGCGAAACTTGTGCTGCccttgcagctgcagctggaCGATGAGCTGGCGGACTTTGCCCATGAACCTATAGGGCTGTCGAATGTTGTTTTACAAGAGGAAGgggacgatgatgatgatctaGATGAGCAGTTTCTGGAACTGGAGAATTTTCCCAATAATGAAATCATAGTGCTTAGCGATCAAGATCTTAACTCATCAATTGCCTCTGACAACATATCCGAGGATCCGCTAGCTATAGATGACTTTGGGCAAAAGGAGGCTGACGACGAAGAGGAGGAGGCTGACAGCAGCGGCGACTTGATGTGGCTCAAACTCGATACGCCAACCAATatcaatagcaacaacagcagcagcgttcTTTCCGTTCCTGGCTGCAGTAGATCTTTAATATCTTCGACTACTGCAGCAGCTACAAACGTAAAGCCACCCATACGGCGAAGAGAGGAGGAGCTGCGCAGCGATGGTGGCTCCGATTCAGGCCTGGGCAGTGAGAATGATAGACAAAACatcacaacaacaagcagcttGCATAAGCCCCTGCGCTCAAATTTGAAACGACGTCTGGATGATGATGCCATGGAGCTGGCATTGCTGCCCATTTCAAGCTGCTCCAACACACAGAAGCGACCGAAGCGTAGCATCAATTTTGATAACGTTAAGATCTTCTATTTTCCCCGGCAACAAGGCTTCGGCTGTGTGCCCACTGCCGGCGGCTGTACGCTGGGCATGGGTGCCCGGCATATTGCCTTTAAGACCATGACTTTGGCGGAGCATGCATCCGAACTGCGACGTGCACATCGTAGCCAAAATCAAGAGcttcagcagcaacatcaccaccaacaacaacagcagcagcagctgcaagcGCGAGGTTCCAGCAGCGACGACAGCGAGGAATCCGAAGAGGATTATCTGAGCGAGGGCAGCGGCTCAGATGCCGACGATGGCTCCAATGGCTTCCTGCAGCCGGTGACGCCCAAGCAGCGGCGTGTCCTGCTCAAAGCAGCTGGTGTACGCAAGATCGATGCCAGCGAGAAGATAGATTGCCGAGATATACGCAACTCGCGCGAAGTGTGCGGCTGCTCTTGTCGCGAATTTTGCGATCCAGAGACATGCGCTTGCAGCCAAGCGGGCATCAAATGTCAAGTGGATCGTGCCATGTTCCCCTGCGGCTGTACGCGTGAAGCTTGTGGCAACACTGTCGGTCGCGTTGAGTTTAATCCAACGCGGGTGCGCACTCACTACATACACACAGTGATGCGTTTGGACATGGAGCAGCGTCAGAGCCAAGGACAATCGTCGgcgagcaacagcagcagcaatggttTGATTTACGGCAGCAGCGTTTCTGGCAACAGTGCTTCAGGCATTGTATCACCTTCTGCATCAACGGGAGCCTCCTCCACACACTGCTTCTTCATGCAGCCGCAGTCGAACTACAGCTCTGGCTACGCCTCACCAGCTTACACGCCCGAGACAAGCGTCAGCTACTatcagcagcatcaacaaacGCCTCCACCTGGTTCCaccggcaacagcagcacgaCGCAGCAGTCTAGCTATGCCACAATCTATCCACAGTTGGACAGCCTTGATGCAAGCCTATTTGCCACCGGAACCAATGCCACGCCCTCCTACGGTGAGCTGTTAACGCCCACCTTTCATCAAACCCTCAGCTATGGCAGCACTCAGCTCAACACTTACGGCTCCTATCAGCAGACAACGGCAGCTTCCGGAGGCATTGCGTCGCCTGTAAGTTATAGCTCGTGTGCCGTGCCATCAGTGCCGCCATTTGGCATTGCCACAACCACCGCCTCGAATTCAACGCAATATCAGCACGTGAATGTGTTAGAAGCCACCGCCACAATGATtaggagcagcaacagcagtatATCTTTAACGGCCAGCAGCTGTGCTACTGGCCTGGCTCGACACGGTGGCGCTGGACCTGTTGATTTCATTAGTTTGAATGCGCCCATTAGCAGTTCGTCGCGTTTGTCGCAGATCAATGATCTTCTGCAGCACAATCGTAGTACCACCGCCGCTTTGGTTGCCGTCTCCGAAAGCTATGCCGCTGttcgcagcagcagtagcGCCAAAACCACGAACAATACCATCACTACCATTGATTCAATTGACACGCCACCCATTGTTGAGGAGGCGCAGCGCAGTTGCATGACCTTTGAGGGGCTGCCACCGCCGCTAATAAATCCCACACCAATTGTCGCTGTTCTTGAGCAGCCGCACAAACAGCTTCTGGATGTGTCCACGACGCCGCTGCCACGCCAGCCACTCGATGTCAGAGCCAGTATGTCCAAATCCTTATCGGGCAGAAGCAACTAA
- Protein Sequence
- MRSMFRPIKKIFTYIQKNANGTMFGTTTSIIKPEVDGAASSSSGIQLAQENELDQLPLKQVVETEHQLQLDDDDIERQIKTSIIDASKVHAAKAKLVLPLQLQLDDELADFAHEPIGLSNVVLQEEGDDDDDLDEQFLELENFPNNEIIVLSDQDLNSSIASDNISEDPLAIDDFGQKEADDEEEEADSSGDLMWLKLDTPTNINSNNSSSVLSVPGCSRSLISSTTAAATNVKPPIRRREEELRSDGGSDSGLGSENDRQNITTTSSLHKPLRSNLKRRLDDDAMELALLPISSCSNTQKRPKRSINFDNVKIFYFPRQQGFGCVPTAGGCTLGMGARHIAFKTMTLAEHASELRRAHRSQNQELQQQHHHQQQQQQQLQARGSSSDDSEESEEDYLSEGSGSDADDGSNGFLQPVTPKQRRVLLKAAGVRKIDASEKIDCRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVGRVEFNPTRVRTHYIHTVMRLDMEQRQSQGQSSASNSSSNGLIYGSSVSGNSASGIVSPSASTGASSTHCFFMQPQSNYSSGYASPAYTPETSVSYYQQHQQTPPPGSTGNSSTTQQSSYATIYPQLDSLDASLFATGTNATPSYGELLTPTFHQTLSYGSTQLNTYGSYQQTTAASGGIASPVSYSSCAVPSVPPFGIATTTASNSTQYQHVNVLEATATMIRSSNSSISLTASSCATGLARHGGAGPVDFISLNAPISSSSRLSQINDLLQHNRSTTAALVAVSESYAAVRSSSSAKTTNNTITTIDSIDTPPIVEEAQRSCMTFEGLPPPLINPTPIVAVLEQPHKQLLDVSTTPLPRQPLDVRASMSKSLSGRSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01323364;
- 90% Identity
- iTF_01324098;
- 80% Identity
- -