Pgla006280.1
Basic Information
- Insect
- Papilio glaucus
- Gene Symbol
- -
- Assembly
- None
- Location
- scaffold:49764-52173[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.033 64 3.8 0.0 46 85 100 139 88 141 0.82 2 5 0.0049 9.6 6.5 0.1 51 86 200 234 181 235 0.80 3 5 0.075 1.5e+02 2.7 0.0 49 83 289 322 271 324 0.82 4 5 1 2e+03 -1.0 0.0 1 30 365 393 365 394 0.79 5 5 0.0017 3.3 8.0 0.0 51 83 391 422 386 425 0.82
Sequence Information
- Coding Sequence
- ATGGATGTAACTCATCCACATAATCAAAGTTATTGGTTCGTACTAAGAGAAGATCAAAGTAATGTTATATTCAGTAGCAATAATTTTGCAATTCAAAATCCACAAAATCAAGAGACTAGGAGTGTTATAGATACTGTTGACAACAGACATTACATACAAATAAATGAAGCCCCCATTCCCATACCTGATGGAACTTTAGAGCATTGTGAAAAAGAAGCTTTGGATACATCAAAAGAAGAAAGCTTTTGGGACAGGAACAAAATCAAATTATTGCTCACACTTTGTCTTGACCAGAGGTACAAAAATGTGATAAAAGATAAAGTTTTATGGGATAAAATTGCTGTCAATGTGGGAGCTTCTCCTGGAGAGTGTGATAAGAAATATAGGAATCTTAGAAGAACATACATCAGATTGATGAAAAAGAAAAGATTAGGTAAAGATATAAAATGGATTCATTACAACATCTGTGAAGAAGTATTTAAAGATTGCAAGTCCTTGTCATCCTCTTTAATAGAATCCTGGGAAGACAACAAAATAAGAAGAATGCTTAACCTGTATATAGAAAATATAAATAAATTCCGAGATCCTGACTGCTTGCAAAAGGATGTTTGGAGAGAAATTGCATTACAGTTAAATACAACTGAATACAATTGTTACCACAAGTTCAAAAATTTAAAAAGAACCTATTTTAATTGGTTGGAGAGGACAAGGGAGACTGGCAAATTAATAAAATGGCCTTACCAAAACTACTTTGAAAGAATATTCTACAACTACAATCCTAATGTTGGCCCTTGGGACAGAAATAAAATAAAACAGCTTATTGCAGCATATGCCGAAATAGCTCACAAATTTAGAAATCCCAAGTTTCAAAAAAAAGAACTTTGGAAAGAAATATCAAACATAGTAGGGGAAAGTCCCAGTAGTTGTGACAGAAAATTCAGAAATTTAAAACAAACATATATAAGGTTAAAAATGAGAGCAGAATCTGGCAGATCAATTACAAAGTGGTATTACTATAAGGATTTTGAATCAATATATGAAAACACCAACTACAACAGTGATGATGGCATACCAAAACTTATGTTCAAACACCAAGAAGAAAACTATGTTCGCCAATTATTAACTTTCTACTTAGATAATAAGGAAAAGTTTAGGGACCCATTAATGAAAAAGAGAAATCTATGGCGACAAATAGGACCCAGTTTGGGCCTCTCCACAGAAGAGTGTGATAAAAAATTCAGAAACTTAAAACAAACATATATAAGACTAGCAGAGAAAAAAAGAGAAACTGGTAAATGTAACCAATGGCCATATTATAGTTACTTTGAACAAATTTATGATGAGCCAAAAGTGAGTAGGGAGTGCAAACACAGGTGCAGCATTGATAATGTGACACTGACAGAAATTAAAAAAGCTGTTAGAAATATGCATCAGAATGAAAACAAAGATAAGTTTGAAAAGTTGGTGCAAGTTATTGCAGACTCAAATGTAATTCAGAGGGAGAGAAACAAAATTCTTCAAGCGCTGCTTCACAGGCAATGA
- Protein Sequence
- MDVTHPHNQSYWFVLREDQSNVIFSSNNFAIQNPQNQETRSVIDTVDNRHYIQINEAPIPIPDGTLEHCEKEALDTSKEESFWDRNKIKLLLTLCLDQRYKNVIKDKVLWDKIAVNVGASPGECDKKYRNLRRTYIRLMKKKRLGKDIKWIHYNICEEVFKDCKSLSSSLIESWEDNKIRRMLNLYIENINKFRDPDCLQKDVWREIALQLNTTEYNCYHKFKNLKRTYFNWLERTRETGKLIKWPYQNYFERIFYNYNPNVGPWDRNKIKQLIAAYAEIAHKFRNPKFQKKELWKEISNIVGESPSSCDRKFRNLKQTYIRLKMRAESGRSITKWYYYKDFESIYENTNYNSDDGIPKLMFKHQEENYVRQLLTFYLDNKEKFRDPLMKKRNLWRQIGPSLGLSTEECDKKFRNLKQTYIRLAEKKRETGKCNQWPYYSYFEQIYDEPKVSRECKHRCSIDNVTLTEIKKAVRNMHQNENKDKFEKLVQVIADSNVIQRERNKILQALLHRQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01141439; iTF_01148622; iTF_01147212; iTF_01149362; iTF_01145089; iTF_01143651; iTF_01140021; iTF_01147894; iTF_01144346; iTF_01138751; iTF_01142199; iTF_01494107; iTF_01495571; iTF_00249503; iTF_00197162; iTF_01129841;
- 90% Identity
- iTF_01141439;
- 80% Identity
- -