Pmem013838.2
Basic Information
- Insect
- Papilio memnon
- Gene Symbol
- -
- Assembly
- GCA_003118335.3
- Location
- JAOPJP010000017.1:4575646-4577460[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.002 3.8 8.3 0.0 43 86 99 142 87 143 0.79 2 4 0.0078 15 6.4 0.2 51 86 202 236 182 237 0.79 3 4 0.1 2e+02 2.8 0.0 49 83 291 324 271 326 0.83 4 4 0.0019 3.5 8.4 0.0 50 83 392 424 381 427 0.84
Sequence Information
- Coding Sequence
- ATGGATGTTACACACTCACATAACCAAAGTTATTGGTTCGTCCTCAGAGAAGATCAAAGCAATGTTATTTTCAGTAGCAATAATTTTGCTATACAAAATCCTCAAATTCCAGGCCAAGATACTAGGAGTGCTATAGAGACTCTTGACAACAGGCAGTACATACATATAAATGAAGCCCCTTTACCAATATCTGATGAAGCTTTAGAACATTGTAACAAGGGTGCACTAGAAACGTTAAAAGAGGAAACATTTTGGGATAAGAACAAAATAAAACTATTCCTCACACTCTGCCTTGACCAAAGGTATAAAAATGTAAATAAAGATAGAGTTCTATGGAATGAAATTGCTGTCGATGTTGGAACTTCTCCTGAAGAGTGTGATAAGAAGTTTAGGAATCTTAGAAGAACGTACATTAGATTGCTAAAAAAGAAAAGATTAGGCAAAGATATAAAATGGATTCATTACAACATTTGTGAAGAAGTATTTAAAGATTGCAAATCCTTGTCACCCTCAATACTGGAGACTTGGGAAGATAACAAAATAAGAAGAATGCTCAACCTGTATTTAGAAAATATTAGTAAATTTCGAAACCCTGACTGCTTACAGAAAGATGTTTGGAAAGAAATTGCTCTACAGTTGAATACAACAGAATACAATTGCTACCACAAGTTCAAAAATCTGAAAAGAACATATTTTAATTGGTTGGAAAGAACCAGGGACACCGGAAAATTAATTAAATGGCCTTACCGAAACTATTTTGAAAGAATATTTTACAACTACAATCCTAATGTTGGCCCTTGGGATAGAAATAAAATACATAAACTTATTGCAGCATATGGCCAAATAGCCCATAAATTTTTAAACCCCAGAATGCAAAAAAAAGAACTTTGGAAAGAAATATCACATATAGTAGGAGAGAGTCCAAGTAATTGTGATAGAAAATTCAGAAATTTGAAACAAACATATATTAGATTAAAAATGAGAGCCGAATCAGGTAGATCTATAACAAAGTGGTATTACTATAAGGATTTTGAATCAATATATGAGAACATCAACTACAGTAGCAATGGTGGCAATCCAAATCTCTTGTACAAAAATCAAGATGTAGATTATGTTCATCAATTGCTAGCTTTCTACTTAGATAATAAGGAAAAGTTCAGAGACCCTTTAATGAAAAAGAAAAACCTATGGAGACAGATAGGACCCACTTTAGGCCTCTCCACAGAAGAGTGTGATAAAAAGTTCAGAAACTTGAAACAAACATACATTAGACTAGCAGAGAAAAAAAGAGCAACAGGTAAATGTAACCAATGGCCATATTACACTTACTTTGAACAAATATATGATCAACCAAAAGTTAATAATAGGGAGTGCAGTCACAGGTGTGCCATTGACAATGTCACATTAACAGAAATTAAAACGGCTGTGAGAAATATACACCAGAATGAAGGAAAAGATAAATTTGAGAAGTTAGTACAAGTAATTGAAGATTCAAATGCAATTCAGAGGGAGAGAAACAATATCCTGTATGCACTACTTAACAGACATTGA
- Protein Sequence
- MDVTHSHNQSYWFVLREDQSNVIFSSNNFAIQNPQIPGQDTRSAIETLDNRQYIHINEAPLPISDEALEHCNKGALETLKEETFWDKNKIKLFLTLCLDQRYKNVNKDRVLWNEIAVDVGTSPEECDKKFRNLRRTYIRLLKKKRLGKDIKWIHYNICEEVFKDCKSLSPSILETWEDNKIRRMLNLYLENISKFRNPDCLQKDVWKEIALQLNTTEYNCYHKFKNLKRTYFNWLERTRDTGKLIKWPYRNYFERIFYNYNPNVGPWDRNKIHKLIAAYGQIAHKFLNPRMQKKELWKEISHIVGESPSNCDRKFRNLKQTYIRLKMRAESGRSITKWYYYKDFESIYENINYSSNGGNPNLLYKNQDVDYVHQLLAFYLDNKEKFRDPLMKKKNLWRQIGPTLGLSTEECDKKFRNLKQTYIRLAEKKRATGKCNQWPYYTYFEQIYDQPKVNNRECSHRCAIDNVTLTEIKTAVRNIHQNEGKDKFEKLVQVIEDSNAIQRERNNILYALLNRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01142912;
- 90% Identity
- iTF_01144346;
- 80% Identity
- -