Pxut008649.1
Basic Information
- Insect
- Papilio xuthus
- Gene Symbol
- -
- Assembly
- GCA_000836235.1
- Location
- NW:5270765-5273212[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.029 46 4.2 0.0 52 86 126 159 106 160 0.82 2 4 0.0005 0.8 9.8 0.2 49 86 218 253 199 254 0.78 3 4 0.063 1e+02 3.1 0.0 49 83 308 341 291 343 0.82 4 4 0.0013 2 8.5 0.0 50 83 409 441 392 444 0.85
Sequence Information
- Coding Sequence
- ATGTCAACAAAGCGAGTTTATAAGAACgaacaaaatagaaaaagtaaCGAAATGGAAGTTACACATTCACACAATCAAAGTTATTGGTTTGTGCTGAGAGAAGATCAAAGCAATGTTATTTTCAGTAGCAATAATTTTGCTATACAAAATCCTCAAATTTCAGACCAAGACTCTAGGAATCCTATAGAGACCCTTGACAACAGGCagtacatacaaataaatgaaGCCCCTTTACCCATATCTGATGAAGCTTTAGAGCATTGTAAAAAAGAAGAACTAGATACATTAAAAGAGGAAACATTTTGGGacaagaacaaaataaaattattgctcACACTCTGCCTTGACCAAAGGtacaaaaattcaaacaaagataaagttttatgGGATGAAATTGCTGTCAATGTTGGAACTTCTCCTGGAGAATGTGATAAGAAATTTAGGAATCTTAGAAGAACATACATTAGAttacttaaaaagaaaagattaggTAAAGATATTAAATGGATTCATTATAACATTTGTGAAGAAGTATTCAAAGATTGTAAATCTTTGTCAACTTCATTACTGGAGACTTGGGAAGATAACAAAATAAGGAGGATGCTCAACTtgtatatagaaaatattaataaatttcgaaACCCTGATTGCTTGCAAAAGGATGTTTGGAGAGAAATTGCTCAACAGTTAAATACAACAGAATATAATTGCTAccataagtttaaaaatttaaaaagaacttattTCAATTGGTTGGAGAGGACTAGAGACACtggcaaattaataaaatggcCCTACCGCAACTATTttgaaagaatattttacaactacAACCCTAATGTGGGCCCTTgggatagaaataaaatacaaaagcttATTGCGGCATATGGTCAAATAGCTCATAAATTTGTAAACCCAAGAATgcaaaaaaaagaactttggAAAGAAATATCAAACATAGTTGGAGAGAATCCAAGTAATTGTGATAGAAAATTCAgaaatttgaaacaaacatatataagattaaaaatgagaGCAGAATCAGGTAGATCAATAACAAAGTGGTATTACTATAAGGATTTTGAATCAATTTTTGAGAACACCAATTACAACAGTAATGATGGAATTCCAAGACTTTTCTACAAAAACCAGGATGGTGACTACGTCCATCAATTGCTTACTTTCTACTTAAACAATAAGGAAAAGTTTAGAGACCCcttaatgaaaaagaaaaatctttggAAACAAATAGGACCCAGTCTGGGACTCTCCACAGAAGAGTGTGATAAAAAATTCAGaaacttaaaacaaacttacattAGACTAGCAGAGAAAAAAAGAGTAACTGGTAAATGTAACCAATGGCCATATTATACTTACTTTGAACAAATTTATGATCAACCAAAAATAAACAGGGAATGCAATCACAGATGCACCATTGACAATGTTACactaacagaaataaaaagtgcTGTTAGAAATATTAACCAAAATGAAGGAAAAGATAAGTTTGAGAAGTTGGTCCAAGTCATTGAAGAATCCAACACTATTCAGAGGGAGAGGAACAATATTCTTCATGCAATGCTTCACAGGCATTGA
- Protein Sequence
- MSTKRVYKNEQNRKSNEMEVTHSHNQSYWFVLREDQSNVIFSSNNFAIQNPQISDQDSRNPIETLDNRQYIQINEAPLPISDEALEHCKKEELDTLKEETFWDKNKIKLLLTLCLDQRYKNSNKDKVLWDEIAVNVGTSPGECDKKFRNLRRTYIRLLKKKRLGKDIKWIHYNICEEVFKDCKSLSTSLLETWEDNKIRRMLNLYIENINKFRNPDCLQKDVWREIAQQLNTTEYNCYHKFKNLKRTYFNWLERTRDTGKLIKWPYRNYFERIFYNYNPNVGPWDRNKIQKLIAAYGQIAHKFVNPRMQKKELWKEISNIVGENPSNCDRKFRNLKQTYIRLKMRAESGRSITKWYYYKDFESIFENTNYNSNDGIPRLFYKNQDGDYVHQLLTFYLNNKEKFRDPLMKKKNLWKQIGPSLGLSTEECDKKFRNLKQTYIRLAEKKRVTGKCNQWPYYTYFEQIYDQPKINRECNHRCTIDNVTLTEIKSAVRNINQNEGKDKFEKLVQVIEESNTIQRERNNILHAMLHRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01142912;
- 90% Identity
- iTF_01144346;
- 80% Identity
- -