Pmac013256.1
Basic Information
- Insect
- Papilio machaon
- Gene Symbol
- -
- Assembly
- GCA_001298355.1
- Location
- NW:325291-327313[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.012 18 5.4 0.0 46 86 102 142 90 143 0.82 2 4 0.00059 0.9 9.6 0.2 49 86 201 236 183 237 0.78 3 4 0.06 92 3.2 0.0 49 83 291 324 274 326 0.82 4 4 0.00098 1.5 8.9 0.0 51 83 393 424 383 427 0.83
Sequence Information
- Coding Sequence
- ATGGATGTTACACATTCACACAACCAAAGTTATTGGTTTGTGCTCAGGGAAGATCAAAGCAATGTTATTTTCAGTAGCAATAATTTTGCTATACAAAATCCTCAAATTCCAGGCCAAGACGCTGGGAATGGTATAGAGACCATTGACACCAGGCagtacatacaaataaatgaaGCACCTTTACCCATATCTGATGAAGCTTTAGAGCATTGTAAAAATGAAGCACTAGAGACATTAAAAGAGGAAACGTTTTGGGacaagaacaaaataaaattattgctcACACTCTGCCTTGACCAAaggtacaaaaatttaaacaaagataaagTTTTATGGAATGAAATCGCTGTCAATGTGGGAACTTCTCCTGGAGAGTGTGATAAGAAATTTAGGAATCTTCGAAGAACATACATTAGATtgctaaaaaagaaaagattagGTAAAGACATTAAATGGGttcattttaacatttgtGAAGAAGTATTCAAAGATTGTAAAACCTTGTCACCCTCATTATTGGAAACCTGGgaagataacaaaataagaaGGATGCTAAACCTGTatttggaaaatattaataaatttcgaAACCCTGACTGTTTGCAGAAGGATGTTTGGAAAGAAATTGCTCAACAGTTAAATACAACAGAATACAATTGCTATCACAagttcaaaaatttaaaaagaacctATTTCAATTGGTTGGAGAGGACTAGGGATACtggcaaattaataaaatggccTTATCGAAACTATTttgaaagaatattttacaactaCAACCCTAATGTGGGCCCTTgggatagaaataaaatacaaaagctTATTGCGGCATATGGCCAAATAGCTCATAAATTTGTAAACCCAAGAATGCAGAAAAAAGAACTTTGGaaagaaatatcaaatatagtAGGAGAGAATCCAAGTAATTGTGATagaaaatttagaaatttgaaacaaacatatataagattaaaaatgagAGCAGAATCAGGTAGATCAATAACAAAGTGGTATTACTACAAGGATTTTGAGTCAATATATGAGAACAGCAACTTCAGTGGCAATGATGGGGTTCCAAGACTTTTGTGCAAAAATCAGGATGGTGACTACATCCATCAAATGCTTACTttctacttaaataataaggaaAAGTTTAGGGACCcattaacaaaaaagaaaaatctatgGAGACAGATAGGACCCAGTTTGGGTCTCTCCACAGAAGAGTGTGATAAAAAATTCAgaaacttaaaacaaacatatattagACTAGCAGAGAAAAAAAGAGCGACTGGTAAATGTAACCAATGGCCATATTACACTTACTTTGAACAAATTTATGATCAACCAAAAGTGAACAAGCAGTGCAGTGACAAGTGCACCATTGACAATGTCACACTTACAGAAATTAAAACAGCTGTTAGAAATATACACCAAAATGAAggaaaaagtaaatttgagAAGTTGGTGCAAGTAATAGAAGATTCAAATGCAATTCAAAGGGAGAGAAATAATATCCTTCATGCATTGCTTCACAGGCattga
- Protein Sequence
- MDVTHSHNQSYWFVLREDQSNVIFSSNNFAIQNPQIPGQDAGNGIETIDTRQYIQINEAPLPISDEALEHCKNEALETLKEETFWDKNKIKLLLTLCLDQRYKNLNKDKVLWNEIAVNVGTSPGECDKKFRNLRRTYIRLLKKKRLGKDIKWVHFNICEEVFKDCKTLSPSLLETWEDNKIRRMLNLYLENINKFRNPDCLQKDVWKEIAQQLNTTEYNCYHKFKNLKRTYFNWLERTRDTGKLIKWPYRNYFERIFYNYNPNVGPWDRNKIQKLIAAYGQIAHKFVNPRMQKKELWKEISNIVGENPSNCDRKFRNLKQTYIRLKMRAESGRSITKWYYYKDFESIYENSNFSGNDGVPRLLCKNQDGDYIHQMLTFYLNNKEKFRDPLTKKKNLWRQIGPSLGLSTEECDKKFRNLKQTYIRLAEKKRATGKCNQWPYYTYFEQIYDQPKVNKQCSDKCTIDNVTLTEIKTAVRNIHQNEGKSKFEKLVQVIEDSNAIQRERNNILHALLHRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01142912;
- 90% Identity
- iTF_01149362; iTF_01147894; iTF_01145089; iTF_01147212; iTF_01143651; iTF_01148622;
- 80% Identity
- -