Ppol002231.1
Basic Information
- Insect
- Papilio polyxenes
- Gene Symbol
- -
- Assembly
- GCA_026167825.1
- Location
- JAOPJD010000017.1:5991048-5993038[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.025 33 5.4 0.0 46 86 108 148 95 149 0.82 2 4 0.0012 1.7 9.6 0.2 49 86 207 242 188 243 0.78 3 4 0.13 1.7e+02 3.1 0.0 49 83 297 330 280 332 0.82 4 4 0.0021 2.8 8.9 0.0 51 83 399 430 390 433 0.82
Sequence Information
- Coding Sequence
- ATGGATGTTACACATTCACACAACCAAAGTTATTGGTTTGTGCTCAGGGAAGATCAAAGCAATGTTATTTTCAGTAGCAATAATTTTGCTATACAAAATCCACAAATTCCAGGCCAAGACACTGGGAATGGCCAAGACACTGGGAATGGTATAGAGACCCTTGACACCAGGCAGTACATACAAATAAATGAAGCACCTTTACCCATATCTGATGAAGCTTTAGAGCATTGTAAAAAGGAAGCACTAGAGACATTAAAAGAGGAAACGTTTTGGGACAAGAACAAAATAAAATTATTGCTCACACTCTGCCTTGACCAAAGGTACAAAAATTTAAACAAAGATAAAGTTTTATGGAATGAAATCGCTGTCAATGTGGGAACTTCTCCTGGAGAGTGTGATAAGAAATTTAGGAATCTTCGAAGAACATACATTAGATTGCTAAAAAAGAAAAGATTAGGTAAAGACATTAAATGGGTTCATTATAACATTTGTGAAGAAGTATTCAAAGATTGTAAAACCTTGTCACCCTCATTATTGGAAACCTGGGAAGATAACAAAATAAGAAGGATGCTAAACCTGTATTTGGAAAATATTAATAAATTTCGAAACCCTGACTGTTTGCAGAAGGATGTTTGGAAAGAAATTGCTCAACAGTTAAATACAACAGAATACAATTGCTATCACAAGTTCAAAAATTTAAAAAGAACCTATTTCAATTGGTTGGAGAGGACTAGGGATACTGGCAAATTAATAAAATGGCCTTATCGAAACTATTTTGAAAGAATATTTTACAACTACAACCCTAATGTGGGCCCTTGGGATAGAAATAAAATACAAAAGCTTATTGCGGCATATGGCCAAATAGCTCATAAATTTGTAAACCCAAGAATGCAAAAAAAAGAACTTTGGAAAGAAATATCAAATATAGTAGGAGAGAATCCAAGTAATTGTGATAGAAAATTTAGAAATTTGAAACAAACATATATAAGATTAAAAATGAGAGCAGAATCAGGTAGATCAATAACAAAGTGGTATTACTACAAGGATTTTGAATCAATATATGAGAACAGCAACTTCAGTGGCAATGATGGGGTTCCAAGACTATTGTGCAAAAATCAGGATGGTGACTACATCCATCAAATGCTTACTTTCTACTTAAATAATAAGGAAAAGTTTAGGGACCCATTAACAAAAAAGAAAAATCTATGGAGACAGATAGGACCCAGTTTGGGTCTCTCCACAGAAGAGTGTGATAAAAAATTCAGAAACTTAAAACAAACATATATTAGACTAGCAGAGAAAAAAAGAGCGACTGGTAAATGTAACCAATGGCCATATTACACTTACTTTGAACAAATTTATGATCAACCAAAAGTGAACAAGGAGTGCAGTCACAAGTGCGCCATTGACAATGTGACACTTACAGAAATTAAAACAGCTGTTAGAAATATACACCAAAATGAAGGAAAAAGTAAGTTTGATAAATTGGTGCAAGTAATAGAAGATTCAAATTCAATTCAAAGGGAGAGAAATAATATCCTTCATGCACTGCTTCACAGGCATTGA
- Protein Sequence
- MDVTHSHNQSYWFVLREDQSNVIFSSNNFAIQNPQIPGQDTGNGQDTGNGIETLDTRQYIQINEAPLPISDEALEHCKKEALETLKEETFWDKNKIKLLLTLCLDQRYKNLNKDKVLWNEIAVNVGTSPGECDKKFRNLRRTYIRLLKKKRLGKDIKWVHYNICEEVFKDCKTLSPSLLETWEDNKIRRMLNLYLENINKFRNPDCLQKDVWKEIAQQLNTTEYNCYHKFKNLKRTYFNWLERTRDTGKLIKWPYRNYFERIFYNYNPNVGPWDRNKIQKLIAAYGQIAHKFVNPRMQKKELWKEISNIVGENPSNCDRKFRNLKQTYIRLKMRAESGRSITKWYYYKDFESIYENSNFSGNDGVPRLLCKNQDGDYIHQMLTFYLNNKEKFRDPLTKKKNLWRQIGPSLGLSTEECDKKFRNLKQTYIRLAEKKRATGKCNQWPYYTYFEQIYDQPKVNKECSHKCAIDNVTLTEIKTAVRNIHQNEGKSKFDKLVQVIEDSNSIQRERNNILHALLHRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01142912;
- 90% Identity
- iTF_01144346;
- 80% Identity
- -