Ppol003805.1
Basic Information
- Insect
- Papilio polytes
- Gene Symbol
- -
- Assembly
- GCA_000836215.1
- Location
- NW:66377-69048[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0048 7.2 6.5 0.0 46 86 102 142 90 143 0.84 2 4 0.0053 7.9 6.4 0.2 51 86 202 236 183 237 0.78 3 4 0.069 1e+02 2.8 0.0 49 83 291 324 275 326 0.83 4 4 0.0012 1.8 8.4 0.0 50 83 392 424 380 427 0.85
Sequence Information
- Coding Sequence
- ATGGATATTACACACTCACATAACCAAAGTTATTGGTTTGTCCTCAGAGAAGATCAAAGCAATGTTATTTTCAGTAGCAATAATTTCGCTATACAAAATCCTCAGATTCCAGGCCAAGACACCAGGAGTGCTATAGAGGCTCTTGATAACAGGcagtacatacaaataaatgaagCCCCTTTACCAATATCTGATGAACCTTTAGAGCATTGTAACAAAGATGCACTAGAGACCTTAAGAGAGGAAACATTTTGGGAtaagaacaaaataaagttattgcTCACACTCTGCCTTGACCaacgatataaaaatgtaaataaagataaatttctATGGAATGAAATTGCTCTCAATGTTGGAACTTCTCCAGGAGAGTGTGACAAGAAGTTTAGGAATCTTAGAAGAACATACATTAGGTTgctaaaaaagaaaagattagGCAAAGATATAAAATGGATACATTACAACATTTGTGAAGAAGTATTTAAAGATTGTAAATCCTTGTCACCCTCAATACTGGAGACATGGGAAGATACCAAAATAAGAAGGATGCTCAACCtgtatttagaaaatattaatagatttcGAAACCCTGACTGCTTGCAGAAAGATGTTTGGAAAGAAATTGCTCTACAGTTGAATACAACAGAATACAATTGCTACCACAAGttcaaaaatctaaaaagaacatattttaattggttGGAGAGAACCAGGGACActggaaaattaataaaatggcCTTACCGAAACTATtttgaaagaatattttacaactacAATCCTAATGTTGGCCCTTGGGATAggaataaaatacaacaacTTATTGCAGCATATGGTCAAATAGCCCACAAATTTTTAAACCCCAGAATGCAAAAAAAAGAACTTTGGAAAGAAATATCACATGTAGTAGGAGAGAGTCCAAGTAATTGTGATAGAAAATtcagaaatttaaaacaaacatacataagattaaaaatgagAGCAGAAACTGGTAGATCTATAACAAAGTGGTATTACTATAAGGATTTTGAATCAATATATGAGAACATTAACTACAATAGCAGTGGTAGCAATCCAAGACTATTGTACAAAAACCAGGATGTAGATTATGTTCATCAATTGCTAGGTTTctacttaaataataaggaAAAGTTTAGAGACCCattaatgaaaaagaaaaacctATGGCGACAGATAGGACCCACTTTAGGCCTCTCCACGGAAGAGTGTGATAAAAAATTCAGAAACTTAAAACAGACATACATTAGACTAGCAGAGAAAAAAAGAGCAACGGGTAAATGTAACCAATGGCCATATTACACTTACTTTGAACAAATATATGATCAACcaaaagtaaatagaaatAGGGAGTGCAATCACAGGTGTGCTATTGACAATGTCACATTAACAGAAATTAAAACGGCTGTTAGAAGTATGCGTCAGAATGAAGGAAAAGATAAGTTTGAGAAGTTGGTTCAAGTAATTGAAGATTCAAATGCAATCCAGAGGGAGAGAAACAATATCCTTCATGCACTACTTAACAGGCATTAA
- Protein Sequence
- MDITHSHNQSYWFVLREDQSNVIFSSNNFAIQNPQIPGQDTRSAIEALDNRQYIQINEAPLPISDEPLEHCNKDALETLREETFWDKNKIKLLLTLCLDQRYKNVNKDKFLWNEIALNVGTSPGECDKKFRNLRRTYIRLLKKKRLGKDIKWIHYNICEEVFKDCKSLSPSILETWEDTKIRRMLNLYLENINRFRNPDCLQKDVWKEIALQLNTTEYNCYHKFKNLKRTYFNWLERTRDTGKLIKWPYRNYFERIFYNYNPNVGPWDRNKIQQLIAAYGQIAHKFLNPRMQKKELWKEISHVVGESPSNCDRKFRNLKQTYIRLKMRAETGRSITKWYYYKDFESIYENINYNSSGSNPRLLYKNQDVDYVHQLLGFYLNNKEKFRDPLMKKKNLWRQIGPTLGLSTEECDKKFRNLKQTYIRLAEKKRATGKCNQWPYYTYFEQIYDQPKVNRNRECNHRCAIDNVTLTEIKTAVRSMRQNEGKDKFEKLVQVIEDSNAIQRERNNILHALLNRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01142912;
- 90% Identity
- iTF_01144346;
- 80% Identity
- -