Phel002888.2
Basic Information
- Insect
- Papilio helenus
- Gene Symbol
- -
- Assembly
- GCA_026546675.1
- Location
- JAOCNA010000017.1:4047482-4049342[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.012 42 5.9 0.0 46 86 102 142 90 143 0.82 2 4 0.0074 27 6.5 0.2 49 86 201 236 182 237 0.78 3 4 0.11 3.9e+02 2.7 0.0 49 83 291 324 275 326 0.83 4 4 0.0019 6.9 8.4 0.0 50 83 392 424 384 427 0.84
Sequence Information
- Coding Sequence
- ATGGATGTTACACATTCACATAACCAAAGTTATTGGTTTGTCCTCAGAGAAGATCAAAGCAATGTTATTTTCAGTAGCAATAATTTTGCCATACAAAATCCTCAAATTCCAGGCCAAGACACCAGGAGTACTATAGATACTCTTGACAACAGGCAGTACATACAAATAAATGAAGCCCCTTTACCCATATCTGATAAAGCTTTAGAGCATTGTAACAAGGATGCACTAGAGACCTTAAGAGAGGAAACATTTTGGGATAAGAACAAAATAAAATTATTGCTCACACTCTGCCTTGACCAAAGGTATAAAAATATAAATAAAGATAAGGTTCTATGGAATGAAATTGCTGTCAATGTTGGAACTTCTCCTGGAGAGTGTGATAAAAAGTTTAGGAATCTTAGAAGAACATACATTAGATTGCTAAAAAAGAAAAGATTAGGCAAAGATATAAAATGGATTCATTACAACATTTGTGAAGAAGTATTTAAAGATTGCAAATCCTTGTCCCCCTCAATACTGGAGACCTGGGAAGATAACAAAATAAGAAGGATGCTCAACCTGTATTTAGAAAATATCAATAAATTTCGAAACCCTGACTGCTTGCAGAAGGATGTTTGGAAAGAAATTGCTCTGCAGTTGAATACAACAGAATACAATTGCTACCACAAGTTCAAAAATCTAAAAAGAACATATTTTAATTGGTTGGAGAGAACCAGGGACACTGGAAAATTAATAAAATGGCCTTACCGAAACTATTTTGAAAGAATATTTTACAACTATAATCCTAATGTTGGTCCTTGGGATAGAAACAAAATACAACAACTTATTGCAGCATATGGCCAAATAGCCCATAAATTTTTAAACCCCAGAATGCAAAAAAAAGAACTTTGGAAAGAAATATCACATATAGTAGGAGAGAGTCCTAGTAATTGCGATAGGAAATTCAGAAATTTGAAACAAACATACATTAGATTAAAAATGAGAGCAGAATCAGGTAGGTCTATAACAAAGTGGTATTACTTTAAGGATTTTGAATCAATATATGAGAACATCAACTATGGTAGCAATGTTGGCAATCCAAGACTCTTGTACAAAAACCATGATGTTGACTATGTTCATCAATTGCTAGCTTTCTACTTAGATAATAAGGAAAAGTTTAGAGACCCATTAATGAAAAAGAAAAACCTATGGAGACAGATAGGACCCACTTTGGGCCTCTCCACAGAAGAGTGTGATAAAAAATTCCGAAATTTAAAACAAACATACATTAGACTAGCAGAGAAAAAAAGAGCAACAGGTAAATGTAACCAATGGCCATATTACACTTACTTTGAACAAATATATGATCAACCAAAAGTAAATAGGAATAGGGAGTGCGGTCACAGGTGTGCCATTGACAATGTCACATTAACAGAAATTAAAACGGCTGTTAGAAATATGCACCAGAATGAAGGAAAAGATAAGTTTGAGAAGTTGGTTCAAGTTATTGAAGATTCAAATGCAATTCAGAGGGAGAGAAACAATATCCTTCATGCACTACTTAACAGGCATTGA
- Protein Sequence
- MDVTHSHNQSYWFVLREDQSNVIFSSNNFAIQNPQIPGQDTRSTIDTLDNRQYIQINEAPLPISDKALEHCNKDALETLREETFWDKNKIKLLLTLCLDQRYKNINKDKVLWNEIAVNVGTSPGECDKKFRNLRRTYIRLLKKKRLGKDIKWIHYNICEEVFKDCKSLSPSILETWEDNKIRRMLNLYLENINKFRNPDCLQKDVWKEIALQLNTTEYNCYHKFKNLKRTYFNWLERTRDTGKLIKWPYRNYFERIFYNYNPNVGPWDRNKIQQLIAAYGQIAHKFLNPRMQKKELWKEISHIVGESPSNCDRKFRNLKQTYIRLKMRAESGRSITKWYYFKDFESIYENINYGSNVGNPRLLYKNHDVDYVHQLLAFYLDNKEKFRDPLMKKKNLWRQIGPTLGLSTEECDKKFRNLKQTYIRLAEKKRATGKCNQWPYYTYFEQIYDQPKVNRNRECGHRCAIDNVTLTEIKTAVRNMHQNEGKDKFEKLVQVIEDSNAIQRERNNILHALLNRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01142912;
- 90% Identity
- iTF_01144346;
- 80% Identity
- -