Pdar015178.1
Basic Information
- Insect
- Papilio dardanus
- Gene Symbol
- -
- Assembly
- GCA_013186455.1
- Location
- QDHC01002477.1:41545-43456[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0019 4.1 8.0 0.0 46 86 100 140 86 141 0.83 2 4 0.00041 0.87 10.1 0.2 49 86 199 234 180 235 0.78 3 4 0.065 1.4e+02 3.0 0.0 49 83 289 322 271 324 0.83 4 4 0.001 2.2 8.8 0.0 50 83 390 422 372 425 0.86
Sequence Information
- Coding Sequence
- ATGGATATTACACAATCACATAACCAAAGTTATTGGTTTGTACTGAGAGAAGATCAAAGCAATGTGATTTTCAGTAGTAATAACTTTGCTATACAAAATCCTCAAAATCAAGAGACTAGGAGTGCTATAGAGCCTCTCGACAACAGACAGTACATACAAATAGATGAAGCCCCTCTGCCTGTATCTGATGAGGTTTTAGAGCATTGTAAAAGGGAAGCATTAGAGACATtaaaagaggaaatattttggGACAAAAACAAAGTCAAATTATTGCTCACACTCTGTCTCGACCAGAGGTATAAAACTGTGAACaaagataaagttttatgGAGTGAAATAGCAATGAATGTGGGGACTTCTCCTGCAGAGTGTGACAAGAAGCTTAGGAATCTTAGAAGAACATACGTCAGACTGCTGAAGAAGAAAAGATTAggtaaagatataaaatggattcattacaatatttgtgAAGAGGTATTTAAAGATTGCAAATCCATGTCGCCTTCCTTGCTGGACTCCTGGgaggataataaaataagaaggATGCTCAACCtgtatttagaaaatataaataaattccgAAACCCTGACTGCTTGCAGAAAGATGTTTGGAAAGAAATTGCTCAACAGTTAAATACAACAGAATACAATTGCTACCACAAGTTcaagaatttaaaaagaacCTATTTCAATTGGTTGGCAAGAAGCAGGGACACGggcaaattaataaaatggcCGTACCGAAACTActttgaaagaatattttacaactACAATCCTAATGTTGGCCCTTGggacagaaataaaatacaacagcTTATTGCAGCATACGGACAGATAGCTCATAAATTTGTTAACCCCAGAATGCAAAAAAAAGAACTCTGGAAAGAAATATCAAACATTGTCGGAGAAAGTCCAAGCAATTGTGATCGgaagtttagaaatttaaaacaaacatatattaGATTGAAAATGAGAGCAGAATCTGGTCGATCAATGACAAAGTGGTATTACTACAAGGATTTTGAATCATTATATGAGAACAGCAACTATGGCAGCAATGATGGTGTACCCCAACTCCTCGGTAAACATCAGGAAGGAGACTATGTTCATCAACTGCTATCTttctacttaaataataaggaAAAGTTCAGAGACCCCTtgatgaaaaagaaaaacctATGGAGGCAGATAGGACCCAGCCTGGGTCTCTCCACTGAAGAGTGTGACAAAAAATTCAGAAATTTGAAACAGACCTATATTAGACTAGCagagaaaaaaaaagcaaCTGGTAAATGTAACCCTTGGCCATATTATACTTACTTTGAACAAATATATGATCAACTAACAGTGAACAGGGAGTGTGGTCACACATGTGGCATTGATAATGCAACAATAACGGAAATTAAAACGGCTGTTAGAAATATGCACCACAACCGAGGAAAAGATAAGTTTGAGAAGCTGGTGCAAGTTATTGAAGATTCAAATTCAATACAGAGGGAGAGAAACAATATTCTTTATGCACTCCTTCACAGACATTGA
- Protein Sequence
- MDITQSHNQSYWFVLREDQSNVIFSSNNFAIQNPQNQETRSAIEPLDNRQYIQIDEAPLPVSDEVLEHCKREALETLKEEIFWDKNKVKLLLTLCLDQRYKTVNKDKVLWSEIAMNVGTSPAECDKKLRNLRRTYVRLLKKKRLGKDIKWIHYNICEEVFKDCKSMSPSLLDSWEDNKIRRMLNLYLENINKFRNPDCLQKDVWKEIAQQLNTTEYNCYHKFKNLKRTYFNWLARSRDTGKLIKWPYRNYFERIFYNYNPNVGPWDRNKIQQLIAAYGQIAHKFVNPRMQKKELWKEISNIVGESPSNCDRKFRNLKQTYIRLKMRAESGRSMTKWYYYKDFESLYENSNYGSNDGVPQLLGKHQEGDYVHQLLSFYLNNKEKFRDPLMKKKNLWRQIGPSLGLSTEECDKKFRNLKQTYIRLAEKKKATGKCNPWPYYTYFEQIYDQLTVNRECGHTCGIDNATITEIKTAVRNMHHNRGKDKFEKLVQVIEDSNSIQRERNNILYALLHRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01142912;
- 90% Identity
- -
- 80% Identity
- -