Pkot004231.1
Basic Information
- Insect
- Pachliopta kotzebuea
- Gene Symbol
- -
- Assembly
- GCA_018246255.1
- Location
- DWLS01001874.1:10272-12081[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.0024 5.6 8.2 0.0 47 86 101 140 96 141 0.81 2 5 0.0016 3.7 8.7 0.1 48 86 198 234 176 235 0.79 3 5 0.1 2.4e+02 2.9 0.0 49 83 289 322 271 324 0.83 4 5 0.69 1.6e+03 0.3 0.0 1 31 365 394 365 394 0.86 5 5 0.0053 12 7.1 0.0 51 83 391 422 386 425 0.82
Sequence Information
- Coding Sequence
- ATGGATGTCACTCACCCACAAAACCAAAGTTATTGGTTCGTGCTACGAGAAGACCaaagtaatgttatatttagtaGTAATAACTTCGCTATTCCCAATCCCCAAAGTCAAGAGACAAGATATATTGTCGATGCTGTTGAAAACAGACATTACATACAAATGAATGAAGCTCCTGTTGTTGTGCAAGATGAAACTGGAGAGCAATGTGAAAAGGAAACTTTGGAAACCACAAAGGAAGATAATTTTTGGGACAGAAACAAGATAATGTTGTTGCTCACATTGTGTCTCGACCACaggtacaaaaatatgaataaagataaaattttgtggAATGAAATTGCAGGTGCAATTGGAACGTCCCCTGAGGAATGTGATAAAAAGTATAGGAATCTCAAGAGAACCTATATTAGACTGCTGAAGAAGAAAAGATTAGGCAAGGACATAAAGTGGATTCACTATCACATTTGTGAAGAAGTCTTCAAAGATTGCAAATCCTTGTCTCCTTTAATACTAGAACCTTGGGAGGATAGTAAAATTAGAAGGATGCTTAACCTgtacatagaaaatataaataaatttagaagtCCAGATTGTTTGCAAAAAGATGTTTGGAAAGACATAGCTGCGCAATTAAACACAACAGAACATAACTGTTaccacaaatttaaaaatttgaaacGAACCTACTTCAATTGGTTGGAGAGAACACGGGAATCTGGCAAATTAATAAAGTGGCCATATCAAAACTACTTTGAGaggatattttataactacaaCCCTAATGTTGGTCCTTGggacagaaataaaataaaacaacttattGCAGCTTACGCTGGAATTGCACACAAATTTAGGAATCCCAAATTTCAAAAGAAGGAGCTTTGGAAAGAAATTTCAAACATAGTAGGGGAAAGTCCTAGTAATTGTGACAGGAAGTTTAGAAATTTGAAACAGACatatataagattaaaaatGAGAGCAGAAGCAGGTAGATCAATAACAAAGTGGTATTACTATAAAGACTTTGAATCAATATATGACAATAGTAATTACCATAATGATGATGGCATACCAAAACCAGCTTACAGAAGTCAAGAAGAGGACTATGTACGTCAGTTACTTACTTTCTATTTGgacaacaaagaaaaattcaGGAatccattaataaaaaagagaaaccTGTGGAGAAAGATTGGGCCACGGCTGGGCCTGACGACTGAGGAATGTGATAAAAagtttagaaatttaaaacaaacctaTATTCGGCTtgccgaaaaaaaaaaagaaactggcAAATGTAATCAATGGCCATACTTTGACCACTTTGAGCAGATTTACGATGAACCAAGAGTAATCAAAGAATGCAACCATAAATGCAATGTTGATGATATCACACTCACAGaaatacaaaaagttattaGAGGCATGCAGCAGAAGGACAGaaaagataaatttgaaaagttaGTGCAAGTTATCGAGGATTCAAATGCGATTCAGAGGGAGAGGAACAAAATTCTCCAAGCGATGCTGCACCGTAAATGA
- Protein Sequence
- MDVTHPQNQSYWFVLREDQSNVIFSSNNFAIPNPQSQETRYIVDAVENRHYIQMNEAPVVVQDETGEQCEKETLETTKEDNFWDRNKIMLLLTLCLDHRYKNMNKDKILWNEIAGAIGTSPEECDKKYRNLKRTYIRLLKKKRLGKDIKWIHYHICEEVFKDCKSLSPLILEPWEDSKIRRMLNLYIENINKFRSPDCLQKDVWKDIAAQLNTTEHNCYHKFKNLKRTYFNWLERTRESGKLIKWPYQNYFERIFYNYNPNVGPWDRNKIKQLIAAYAGIAHKFRNPKFQKKELWKEISNIVGESPSNCDRKFRNLKQTYIRLKMRAEAGRSITKWYYYKDFESIYDNSNYHNDDGIPKPAYRSQEEDYVRQLLTFYLDNKEKFRNPLIKKRNLWRKIGPRLGLTTEECDKKFRNLKQTYIRLAEKKKETGKCNQWPYFDHFEQIYDEPRVIKECNHKCNVDDITLTEIQKVIRGMQQKDRKDKFEKLVQVIEDSNAIQRERNKILQAMLHRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01142912;
- 90% Identity
- iTF_00249503;
- 80% Identity
- -