Ostr032419.2
Basic Information
- Insect
- Oligia strigilis
- Gene Symbol
- -
- Assembly
- GCA_951800025.1
- Location
- OX637569.1:4334886-4358196[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-09 8.1e-07 29.7 0.1 4 42 217 255 216 257 0.92
Sequence Information
- Coding Sequence
- ATGAAGGAAGTTAACATAAACATTGAAGGCTATAATGTTAACGGGATATGTGTCGGCTGTTTAAACTACAATCGTCAAATGACTTACCACCCCTTCATCAAAGAATGTTTTCGTTTGCTCGGAAATATCGATGTTCCAGATGGTCTGGAAGTCCAGGTGTGTTGGGAGTGCCTGGCGCGCGTCAAATCTGTTATCAACTTCAAGGAACAGATACTAAAGTCTTACGACTTTCTTATCTCGTACTCTAAGGAGCACACATTCCTGGAGTCTCCTGATGACTTTGGCCCTCACGCCACCATCAATATGGAGTGGACAGGAGTGGAGTGTTTCGAGTGTTGGCCACAAGTAGAAGTAGTGGAGGATGATGAGATAGCAGGTGATGTTAAAAAGGAGGAAGAGATTGAAGATAAGTATTTTGAGGTGGCTTTAAAAGAAGAAACTTTTGACGACCCATACTTCCAAGATATGCCTACTGTTGACAATGATATAACATCAGATGAAGACGTGCAGCTTTCTAAACTAAAAGAGAACGAGACGGAGAAagggaagaagaagaaaaagagtGAGAAGAAGAAGGAACGGGAGGGAGATCGGATGCCAGCGAACAAACGACCGAGAAAGACGACACGAGGTCTCTATGACATAGCACAGTTTGAAGCTGCATATGACCAAATTGTCAACCACGGGGTGTCCGTACGACAAGCGGCCAAAATGTTCGATATCACACACGTCACTCTTCAAAGGTACAAGAAGCGGCGTCAAACCACAAATTTTCCTGTCAAAGTCGGTTATGCGCGGAACAGTTTTTATACAGCAGACCAGGAAACTCTCCTAACGAAATACTTGAAACAATACGCGGAGATATTTCCCGGGTTATGCGTGAGGGTAGTCAGAAAATATGCGACGGAATTCAGTCAGAAGCTGGGTTTGAAAACTCCGAAGCCTTGGTTTGACAATAAAATGGCTGGCATCGATTGGTACAAGAACTTCATGTACAGGAATAAAGCTTTAGAAGATAAAATGGATCGGCAATCTGCTAAAGAAAAAGTTAGAGTTTTTTATGATCGGCTGTTTAGTATTTTGTGTCAGTACAATATTGGTTCAGAAAACATTTACTCTTTAGATGAAATAGGAGTTAATATTGAAGAGTTTAGAGATAAAATTTGGTTGATGACGTCGAAAAATGGACCTATAGCTTTGAAAGAGTCTAAAGTTATGTTCACTTACGCAGCGAACGCTAAGGGTTATGTCATAccccctttatttttattaccagCAGAGAAAACAGAAGAAACTCCGAAAAACAATTTCGAAGTCAAAATAGAGAAAGATTTGGTGAATGAATCAGATTGTCCGAACGAGACAACATTtaataaattcttaaaaaatgGCGTCGATTTAAAAAACCTACCCGATTGGACGGAAGACCCTAATTTCTTGgtGGTCTACCCAAAGCTCCAGAAGACTAAGAAGGACAAAAACCTCGACAAAAAGAGTAGGAAGCTAAAGAATCTTCCAGAAGAACTTGTAGAATTGTACACTATGAGTAAAGAAGAGATGTGGGGCACCAGAATTGAGGATCTTAACAGCAAGGAGTTTCAGAAGCTTAAATATagGTGTAAAGATTGCATAATTGCCTTCAACACTGAGAAGTTGATGCTTGACCATCTAAATGGAAAACACCAACCGAAAAACGAAGACTGCCATCAATGCTCAATCTGCCATGCCTATTTCATAACTAAGGACAATGTGGCCGCGCACAAGGCGTTACATCTACAGGGTTATAAGTGTCGGGAGTGTGGTTTCAATACTACGCTCAAACGACGTATGTTGAAACATGTTGGGAGTCACGCGCCGGGTGGGGGTGTTCATGTGTGCCAGACTTGTGGTACTGGCTTTAGCACAAAATCGAAGCTAACATACCACCGCGTCGTGTGTTGTCAAGAAAAGCCACAATGTGACTGCTGTGGAAAAGTATTCGCCAACAAAATGACGCTGAAATACCACCTTAAAATCCTGCCTAAGAATAAAGATGATAAGCCTAAGGAGAAGCTGTACATACCGTGCAAGGGATGCGATAAAGTGTTCCATTCGAAGAAGAGCTATAGAGCGCATGCTGTAATCCACGACGGCGTAACCCACCCGTGCCCAATCTGCGGCAAACTGTTCCAATGGAAGCGCAACCTGGCGCGACACACGCGCAACCATCGCGAGCGGCAGGCGGGCAACTTGCACGAGTGCCGCGCTTGCGGCAAGACCTTCGCGAGCAGGGACTGCTTTAACAACCACATGCGGCTCAGCAAAAAGCACGTATCCCAGGATACTTTCCCACACGAATGTAACTACTGCGGAAAGAAATTCGCTTCAAAATGGTGCCTGACCGACCACATCGACTGGGATCACTTAAAGAAAATCAAATACCAATGTTCCTTTTGTTTTAAGGCATTTAAAACGGCTAAAATATTGGTGGCTCATGTCAATAATATCCATGAGGGAAAGAAAAAAGAAGCGGAGGGTGAACATCTATGCGAAATATGTGGGAAATCATACCGGACAGTGAAACGTCTAAAGGGCCACGTATGGGCGATGCACACAAAACGAGCAAGCAgcaaaatattcaaatgtaAGCTGTGTCCGGCGACGTTCATGTGGCAGACGAGCGTATACAAGCATATGAAGATGATGCACGATAATAATAAGAAGAGTAAGaCACCGCGCGCCGTCCAACCTGTGAAGAAAGAAGAGCcctacccgggaatcgaactagCGAACCGCATGCAGTACTTCCAACAAAACATTGGCGGCAACTTTAATATAGTTCACATACAGCCTTTGCCAGTAACTCAGAATATTGTATAA
- Protein Sequence
- MKEVNINIEGYNVNGICVGCLNYNRQMTYHPFIKECFRLLGNIDVPDGLEVQVCWECLARVKSVINFKEQILKSYDFLISYSKEHTFLESPDDFGPHATINMEWTGVECFECWPQVEVVEDDEIAGDVKKEEEIEDKYFEVALKEETFDDPYFQDMPTVDNDITSDEDVQLSKLKENETEKGKKKKKSEKKKEREGDRMPANKRPRKTTRGLYDIAQFEAAYDQIVNHGVSVRQAAKMFDITHVTLQRYKKRRQTTNFPVKVGYARNSFYTADQETLLTKYLKQYAEIFPGLCVRVVRKYATEFSQKLGLKTPKPWFDNKMAGIDWYKNFMYRNKALEDKMDRQSAKEKVRVFYDRLFSILCQYNIGSENIYSLDEIGVNIEEFRDKIWLMTSKNGPIALKESKVMFTYAANAKGYVIPPLFLLPAEKTEETPKNNFEVKIEKDLVNESDCPNETTFNKFLKNGVDLKNLPDWTEDPNFLVVYPKLQKTKKDKNLDKKSRKLKNLPEELVELYTMSKEEMWGTRIEDLNSKEFQKLKYRCKDCIIAFNTEKLMLDHLNGKHQPKNEDCHQCSICHAYFITKDNVAAHKALHLQGYKCRECGFNTTLKRRMLKHVGSHAPGGGVHVCQTCGTGFSTKSKLTYHRVVCCQEKPQCDCCGKVFANKMTLKYHLKILPKNKDDKPKEKLYIPCKGCDKVFHSKKSYRAHAVIHDGVTHPCPICGKLFQWKRNLARHTRNHRERQAGNLHECRACGKTFASRDCFNNHMRLSKKHVSQDTFPHECNYCGKKFASKWCLTDHIDWDHLKKIKYQCSFCFKAFKTAKILVAHVNNIHEGKKKEAEGEHLCEICGKSYRTVKRLKGHVWAMHTKRASSKIFKCKLCPATFMWQTSVYKHMKMMHDNNKKSKTPRAVQPVKKEEPYPGIELANRMQYFQQNIGGNFNIVHIQPLPVTQNIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01095284; iTF_01026759; iTF_01029645; iTF_01029199; iTF_01026065; iTF_00888642; iTF_00888193; iTF_01031066; iTF_01031444; iTF_00123308; iTF_00123720; iTF_00122771; iTF_00122315; iTF_00623515; iTF_00622761; iTF_00120446; iTF_00120877;
- 90% Identity
- iTF_01095284; iTF_00924569; iTF_00925197; iTF_01094367; iTF_01093983;
- 80% Identity
- iTF_01095284;