Acre032910.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Apamea crenata
Gene Symbol
-
Assembly
GCA_949629185.1
Location
OX451382.1:7674493-7697365[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-09 8.1e-07 29.7 0.1 4 40 180 216 179 219 0.94

Sequence Information

Coding Sequence
ATGGATTGTAATGTCCATTTCCAGGTGCCAGATGGTCTGGAAGTCCAGGTCTGCTGGGAATGCCTGGCACGCGTCAAATCTGCTATCAACTTCAAGGAACAGATGCTAAAGTCTTACGACTTCCTTATCTCGTACTCTAAGGAGCACACATTCCTGGACTCTCCGAATGACTTCGGCCCTCACGCCACTATCAACCTAGAGAGGACAGCATTGGAGTGTGACGAGTGTCTGCCGGAAGATGAAGTGGTGGAGGATACTGAGACAGCAGTTGATTTTAAAGAGGAGGAGGAGATTGGGAATAAATATGGTTTCGAGGTGGCCATAAAAGAAGAAACGTATGACGACCCATACTTCCAAGATATGCCTGCTGTTGACAATGATATCACATCGGATGAAGACGTGCAACTTTCTAAACTTAAAGATACGGAGAAAGGGAAAAAGAAGAGAAAGAGTGAGAAGAAGAAAGAACAGGAGAGAGATCGGATGCCAGCCAACAAACGACCAAGAAAAACGACACGAGGTCTCTACGACATAGCTCAGTTTGAAGCTGCTTATGACCAAGTTGTCAATCACGGGGTGTCCGTCCGAAAAGCGGCTAAAATGTTCGATATCACACACGTCACCCTGCAAAGGTACAAGAAAAGACGTCAGATCACAAATTTTCCTGTCAAAGTTGGCTATGCACGTAACAGTTTTTATACAGCAGATCAGGAAACTCTCCTAACGAAATACTTGATAAAATACGCGGAAATATATCCCGGGTTATGCGTGAGGGTAGTCAGAAAGTATGCGACGGAGTTCAGTCAAAAGCTGGGTTTGAAAACTCCGAAGTCTTGGGTTGACAATGAAATGGCTGGTGTTGATTGGTACAAGAATTTTATGTGCAGGAATACAGCGTTACAACATAAAATTGATCGGCAGACTGCTAAAGAAAAAGTTAGAGTTTTCTATGATCGATTGTGGAGTACTTTATGCCAGTACAATTTTGGATCAGAAAACATCTACTCTTTAGATGAAATAGGAGTTAATATAGAAGAGTTCAGAGATAAAATTTGGCTGATGACGACGAAGAATGGCCCTATAGCTTTGAAAGAGTCTAAAGTTGTGTTCACTTACGCAGCGAACGCTAAGGGCTATGTCATAccccctttatttttaataccacCAGAGAAAAAGGAAGATAAGCCAAAAATCAACGCTGAAATCAAAACAGAAAAAGATTTGGTGAACGAATCGGATTACTCAAACGAGACAACTTTCAATGAATTCTTAAAAAATGGCGTCGATTTAAAGAACCTACCTGATTGGACGGAGGACTCTAATTTCCTGATCTTTCTAAAACATTTCACGAAGAATTTAAGAAACTCTGTGGGACCAAAACTATTGCTGCTCCTGGAGAATCAGACTTTTCATTTAAGCATTGAGGCATACAGGCTCGATGTTATATCTCCCTTCATTTCACAGGTGGACTCCCCAAAGCGCCAGAAGACTAAGAAGGACAAAGACCCCGAGAAGAAGAGTAGGAAGTTAATGAATCTCCCAGAAGAGTTGGTAGAATTGTACACTATGAGTAAGGAAGAGATGTGGGCTATCAGGATTGAGGACCTGAACAGCAAGGAGTTTCAGAAGCTTAAGTAtaggTGCGATAACTGCATTATTGCCTTCAACACTGAGAAATTGATGCATGATCATTTAAATGGTAAACACCAACCAaaaagCGAAGACTGCCATCAATGCTCAATATGCCAGGCCTATTTTATAACGAAGGACAACGTGGCCGCACACAAGGCGTTACACCAACAGGGATATAAGTGTCGGGAGTGTGGGTTCAATACTACGCTCAAACGACGTATGTTGAAACATGTTGCGAGTCACGCGCCGAGTGGGGGTGGTCATGTATGCCAGACTTGTGGGACTAGCTTTAGCACAAAATCGAAGCTAACATACCACCGTGTCGTGTGTTGTCAAGAAAGGCCACAATGTGACTGCTGCGGCAAAGTCTTCGCGAACAAAATGACGCTCAAGTACCACCTCAAAATCCTGCCTCAGAATAAAGATGATAAGCCTAAGGAGAAGTTGTTCATACCATGCAAGGGTTGTGATAAAGTGTTCCATTCGAAAAAGAGCTATAGAGCGCATGTTGTGATCCACGACGGCGTGACCTACCCCTGCCCGATCTGCGGCAAACTGTTCCAATGGAAGCGCAACCTGGCGCGACACTCGCGCAACCATCGCGAGCGACAGGCGGGCAACCTGCACGAGTGCCGCGCTTGCAGCAAGACCTTCGCGAGCAGGGACTGCTACAACAACCACATGCGGCTCAGCAAGAAGCACGTGTCCCAGGATACTTTCCCACACGAATGCAACTACTGCGGAAAGAAATTCGCTACAAAATGGTGTCTGACCGACCACATCGACTGGGATCACTTGAAGAAAATCAAATACCAATGTTCCGTCTGCTTTAAGGCATTCAAAACGGCTAAAATATTGGTGGCTCACGTCAATAATATACATGAGGGTAAGAAAAAAGAAGCTGAGGGCGAACATCTGTGCGAAATATGTGGGAAATCATACAGAACAGTGAAACGTCTAAAGGGACACGTCTGGGCGATGCACACCAAACGATCGAGCAGCAAGATATACAAATGTAAGCTGTGCCCGGCGACGTTCATGTGGCAGACCAGCATATACAAGCACATGAAGATGATGCACGACAATAATAAGAAGAGTAAGaCACCACGCGCCGTCCAACCTGTGAAGAAAGAGGAGCCctacccgggaatcgaactagCGAACCGCATGCAGTACTTCCAACAGAACATTGGCGGAAACATAAATATAGTTCACATACAGCCTTTGGGAATGACTCAGAATATTGTTTAA
Protein Sequence
MDCNVHFQVPDGLEVQVCWECLARVKSAINFKEQMLKSYDFLISYSKEHTFLDSPNDFGPHATINLERTALECDECLPEDEVVEDTETAVDFKEEEEIGNKYGFEVAIKEETYDDPYFQDMPAVDNDITSDEDVQLSKLKDTEKGKKKRKSEKKKEQERDRMPANKRPRKTTRGLYDIAQFEAAYDQVVNHGVSVRKAAKMFDITHVTLQRYKKRRQITNFPVKVGYARNSFYTADQETLLTKYLIKYAEIYPGLCVRVVRKYATEFSQKLGLKTPKSWVDNEMAGVDWYKNFMCRNTALQHKIDRQTAKEKVRVFYDRLWSTLCQYNFGSENIYSLDEIGVNIEEFRDKIWLMTTKNGPIALKESKVVFTYAANAKGYVIPPLFLIPPEKKEDKPKINAEIKTEKDLVNESDYSNETTFNEFLKNGVDLKNLPDWTEDSNFLIFLKHFTKNLRNSVGPKLLLLLENQTFHLSIEAYRLDVISPFISQVDSPKRQKTKKDKDPEKKSRKLMNLPEELVELYTMSKEEMWAIRIEDLNSKEFQKLKYRCDNCIIAFNTEKLMHDHLNGKHQPKSEDCHQCSICQAYFITKDNVAAHKALHQQGYKCRECGFNTTLKRRMLKHVASHAPSGGGHVCQTCGTSFSTKSKLTYHRVVCCQERPQCDCCGKVFANKMTLKYHLKILPQNKDDKPKEKLFIPCKGCDKVFHSKKSYRAHVVIHDGVTYPCPICGKLFQWKRNLARHSRNHRERQAGNLHECRACSKTFASRDCYNNHMRLSKKHVSQDTFPHECNYCGKKFATKWCLTDHIDWDHLKKIKYQCSVCFKAFKTAKILVAHVNNIHEGKKKEAEGEHLCEICGKSYRTVKRLKGHVWAMHTKRSSSKIYKCKLCPATFMWQTSIYKHMKMMHDNNKKSKTPRAVQPVKKEEPYPGIELANRMQYFQQNIGGNINIVHIQPLGMTQNIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01094841;
90% Identity
iTF_00122771;
80% Identity
iTF_00122771;