Mimp047345.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mythimna impura
Gene Symbol
-
Assembly
GCA_905147345.1
Location
LR990364.1:369802-418355[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-08 1.3e-05 26.6 0.0 4 41 217 253 216 255 0.94

Sequence Information

Coding Sequence
atgaaagaaattaacataaatatagAAGGTTATAACGTGAACGGGATATGTGTTGGCTGTTTGAACTATAATCGTCGTATGTTTTATCATGCTAGCGTGAAAGAATGTTTTCGTTTGCTGGGGAATATCGACGTTCCAGATGGCTTAGAAGTCCAGGTGTGCTGGGAATGCCTGGGCCGCGTCAAATCTGCTATCAGCTTCAAGGAGCAAATGCTAAAGTCGTACGACTTCCTTATCCAATATTCTAGAGAGCACACATTCCTGGACTCTCCAAACGACTTCAACCCTCACGCGACTGTCAACATAGAACAGACTGATGTGGAATGTTACGAATGTACACCAGAGACTGATGCCGTAGAGGATGAGAAGGACGCAGAGGTCAAGGCGGAGGAGGAGATCGAGGATAAGTATTCATTTGAGGTGGCCGTTAAAGAGGAAACATTCGACGACCAGTACTTCCAGGATATACCAGCAGTTGACAATGACGTCACATCAGATGAAGACGTACAACTTTCTAAGCTGAAAGAGAAAGAAACTGAAAAAGTCAAGAAGAAGAGAAAAAGCGAGTTGAAGAGAGATAGGGAAAGAGATAGAATGCCAGCCAACAAAAAGCCGAGAAAGACGAACAGAGGTGTCTATGACATATCACAATTTGAGGCAGCATTTGAACAAATTATACAAGGTGTATCTGTACGAAAAGCCGCTAAAATGTTCGGCTTAACTCATGTCACActgcaaaaatacaaaaagaaacgtCTAGAAAATAATTATCCTGTCAAAATGGGATATGCGAGAAACAGTTTCTTTACTACGGAACAAgagaatctcctaacgatataCCTCAAAAGATATGCAGATGTATATCCCAGTCTATGTGTTAAATTGGTCAGAAAATACGCTAAAGAGTTTAGTGAGAAACTCGGAATGAAAACACCAAAACCTTGGCTAGAAAACGAAATGGCAGGTGTAGATTGGTACAAGAACTTTATGTACAGAAATAAGGGTTTAGATGATAAAGTTGCTAGAACAACTGCTAAAGAGAAAGTTAGAGTTTTCTACGACCGCTTATGGAAAACTTTGAGCCAATACAATTTTTCTGCCgataatatttattgtattgatGAAATCGGCGTTAACATTGAAGACTTTAGAGATAAAATTACTCTGATTACCACAGAAAATGTAATTTCATTGCACATGTCTCAAGTAAAGTTCGCATATGCAGCGAACGCTAAAGGCAATGCAATACCTCCATTATTTTTTATGCCACGAGAGAATAATGAAGATTCGAAGACAGACGTTGAAATCAAAACGGAAAATGACACAGAAATACCAAATGAAACTACGTTTATAAATTTTTTGAAAGACTGCATTGATTTAAAAAACTTACCTGATTGGACGGAAGATCCCAATTTCTTGGTAGACTCCCCAAAACGCcagaagacaaagaaggaaaaaaGTCCCGACAAGAAGAGCAGAAAGCTAAAGAACCTTCCAGAAGAACTGGTAGAATTGTATACTATGAGTAAAGAGGAAATGTGGGGGATCAGGATCGAGGATCTGAACAGTAAGGAGTTCCAGAAGCTGAAGTACAGGTGTGATGATTGCATTATTGCCTTCAATACAGAGAAACTGATGCATGACCATCTGAATGGGAAACATCAACCGAAAAGTGAAGACTGCCATCAATGCTCAATATGCCAAGCCTACTTCCTCACAAAGGACAACGTCTCCGCTCACAAAGCGCTACATCTACAAGCGTACAGATGCAGACAGTGTAGTTTCAACACTACGCTCAAGAGACGCATGTTGAAACACGTCGGTTCCCACGCGCCGACTGGGGATGCGCATGTGTGTAGCACTTGTAATACCAGCTTTagTACAAAATCGAAGCTAACCTACCACCGCGGCGTCTGCCGTCAAGAAAGGCCGCAGTGCGACTGTTGCGGAAAAGTTTTTGCCAACAAAATGACGCTTAAGTACCACTTGAAAATCTTGCCTCAGAATAAAGATGACAAGCCGAAAGAGAAACTCTATATACCCTGCAAGGGATGCGACAAAGTGTTCCACTCCAAGAAAAGTTACAGAGCACACGTCGTTATCCACGACGGCCTAACTTACCCATGCCCAATTTGCGGCAAACTGTTCCAATGGAAGCGCAACCTGGCGCGGCACTCGCGCAACCACCGCGAGCGCGAGCTGGGCAGCCTGCACGAGTGCCGCGCCTGCAGCAAGACCTTCGCCAGCAGGGACTGCTACAACAACCACATGCGGCTCAGCAAGAAGCACGTCTCGCAGGATACCTACCAACACGAATGTAACTACTGCGGTAAGAAATTTGCCACAAAATGGTGCCTGACTGACCACATAGACTGGGATCACTTGAAGAGAATCAAGTACCAATGTAGTTTCTGTTTTAAGgcattCAAAACGGCTAAGATATTGGTGGCTCACGTCAATAATATACATGAGGGGAAGAAGAAAGAAGCGGAGGGGGAACACCTTTGTGAAatatgtgggaaatcatacagGACAGTAAAACGCTTGAAGGGCCACGTGTGGGCGATGCACACGAAGCGTTCGAGCAGCAAGATCTACAAATGCAAGCTGTGCCCCGCCACCTTCATGTGGCAGACGAGCATCTACAAGCATATGAAGATGATGCACGATAATAACAAGAAGACTAAGcCGCCGCGCGCTGTCCAACCAGTGAAGAAAGAAGAGCCCTACCCAGGAATCGAACTGGCGAACCGTATGCAGTACTTCCAACAGAACATCGGCGGCAACTTAAACATAGTCCACATACAACCTTTGGGAATTACTCAGAATATtgtctaa
Protein Sequence
MKEININIEGYNVNGICVGCLNYNRRMFYHASVKECFRLLGNIDVPDGLEVQVCWECLGRVKSAISFKEQMLKSYDFLIQYSREHTFLDSPNDFNPHATVNIEQTDVECYECTPETDAVEDEKDAEVKAEEEIEDKYSFEVAVKEETFDDQYFQDIPAVDNDVTSDEDVQLSKLKEKETEKVKKKRKSELKRDRERDRMPANKKPRKTNRGVYDISQFEAAFEQIIQGVSVRKAAKMFGLTHVTLQKYKKKRLENNYPVKMGYARNSFFTTEQENLLTIYLKRYADVYPSLCVKLVRKYAKEFSEKLGMKTPKPWLENEMAGVDWYKNFMYRNKGLDDKVARTTAKEKVRVFYDRLWKTLSQYNFSADNIYCIDEIGVNIEDFRDKITLITTENVISLHMSQVKFAYAANAKGNAIPPLFFMPRENNEDSKTDVEIKTENDTEIPNETTFINFLKDCIDLKNLPDWTEDPNFLVDSPKRQKTKKEKSPDKKSRKLKNLPEELVELYTMSKEEMWGIRIEDLNSKEFQKLKYRCDDCIIAFNTEKLMHDHLNGKHQPKSEDCHQCSICQAYFLTKDNVSAHKALHLQAYRCRQCSFNTTLKRRMLKHVGSHAPTGDAHVCSTCNTSFSTKSKLTYHRGVCRQERPQCDCCGKVFANKMTLKYHLKILPQNKDDKPKEKLYIPCKGCDKVFHSKKSYRAHVVIHDGLTYPCPICGKLFQWKRNLARHSRNHRERELGSLHECRACSKTFASRDCYNNHMRLSKKHVSQDTYQHECNYCGKKFATKWCLTDHIDWDHLKRIKYQCSFCFKAFKTAKILVAHVNNIHEGKKKEAEGEHLCEICGKSYRTVKRLKGHVWAMHTKRSSSKIYKCKLCPATFMWQTSIYKHMKMMHDNNKKTKPPRAVQPVKKEEPYPGIELANRMQYFQQNIGGNLNIVHIQPLGITQNIV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01094841;
90% Identity
iTF_01029199;
80% Identity
iTF_01026759;