Aepo003359.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Apamea epomidion
Gene Symbol
-
Assembly
GCA_947507525.1
Location
OX382255.1:1293646-1313889[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.9e-10 3e-07 30.4 0.1 4 43 218 257 217 258 0.93

Sequence Information

Coding Sequence
ATGAAGGAAGTTAACATAAATATTGAAGGCTATAATGTTAACGGGATATGTGTCGGCTGTTTAAACTACAATCGTCAAATGTTTTACCACCCCTCCGTGAAAGAATGTTTTCGTTTGCTTGGAAATATCGACGTGCCAGATGGTCTGGAGGTCCAGGTGTGCTGGGAATGCCTGGCACGCGTCAAATCTGCTATCAACTTTAAGGAACAGATGCTAAAGTCTTACGACTTTCTTATCTCGTACTCTAAGGAGCACACATTCCTGGACTCTCCGAATGACTTCGGCCCTCACGCCACCATCAACATGGAGAGGACAGCAGTGGAGTGTTACGAGTGTCTGCCCGAAGCAGAAGTGGTGGAGGATACTGACACAGCAGTTGATGTTAAAGAGGAAGAGGAGATTGAGGATAAGTATGGTTTCGAGGTGACCATAAAAGAAAACACGTTGGACGACCCATATTTCCAAGATATGCCTACTGTTGACAATGATATCACATCGGATGAAGACATGCAGCTTACTAAACTAAACGAGAAAGAGACGGAGAAAGTGAGGAAGAAGATAACGAGTGAGAAGAAGAAGGAACGGGAGAGGGATAGGATGCCAGCCAACAAACGGCCGAGAAAAACGACACGAGGTCTGTACGACATAGCACAGTTTGAAGCTGCTTATGACCAAGTTGTCAATCACGGGGTGTCCGTACGACGAGCGGCAAAAATGTTCGATATCACACACGTCACCCTCCAAAGATACAAGAAAAGACGTCAGACCACAAGTTTTCCTGTCAAAGTTGGCTATGCACGTAACAGTTTTTATACAGCAGATCAGGAAACTCTCCTAACGAAATACTTGACAAAATACGCGGAGATATATCCCGGGTTATGCGTGAGGGTAGTCAGAAAGTATGCTACAGAGTTCAGTCAGAAGCTGGGTTTGAAAACTCCGAAGTCTTGGGTTGATAATGAAATGGCTGGTGTTGATTGGTACAAGAATTTTATGTACAGGAATACAGCGTTAAAAGATAAAATTGTTCGGCAGACTGCTAAAGAAAAACTTAGAGTTTTTTATGATCGATTGTGGAGTATTTTATGCCAGTATAATTTTGGATCGGAAAACATCTACTCTTTAGACGAAATAGGGGTCAATATTGAAGAGTTTAGAGATAAAATTTGGCTGATGACGACGAAGAACGGACCTATGGCTTTGAAAGAGTCTAAAGTTTTGTTCACTTACGCAGCCAACGCTAAGGGGCGTGGCGGTGCGTCGATGTGCGATGGCGCGAGCCAGAGCATGCGAGAGCTAGCAGAGTGCTTTGGTACGAGTAATAGTCGGGACTACTCGGTACTAGAGGAACTAAAGGACACATTTGAATTGGTAGTGAACGAGGCATACAGGCGCTATGTTATATCTCCCTTCATTTCACAGGTGGAGTCCCCAAAGCGCCAGAAGACTAAGAAGGACAAAAACCCCGACAAGAAGAGTAGGAAGCTAAAGAATCTCCCAGAAGAGTTGGTAGAATTGTACACTATGAGTAAAGAAGACATGTGGGCTATCAGGATTGAGGATCTGAACAGCAAGGAGTTTCAGAAACTTAAGTATAGGTGTGATGACTGCATTATTGCCTTCAACACTGAGAAATTGATGCATGATCATTTAAATGGTAAACACCAACCAAAAAGCGAACACTGTCAGTTATGCTCAATCTGTCAGGCCTATTTCCTAAAGGACAACGTGGCCGCACACAAGGCGTTACATCAACAGGGATATAAATGTCGGGAGTGTGGGTTCAACACTACGCTCAAACGACGCATGTTGAAACATGTTGGGAGTCACGCGCCGAGTGAGGATGCTCATGTATGCCAGGCTTGTGGGACTAGCTTTAGCACAAAATCGAAGCTAACATACCACCGTGACGTGTGTTGTCAAGAAAGGCCACAATGTGACTGCTGCGGCAAAGTCTTCGCCAACAAAGTGACGCTCAAGTACCACCTCAAAATCCTGCCACAGAATAAAGATGATAAGCCTAAGGAGAAGCTGTTCATACCGTGCAAGGGATGCGATAAAGTGTTCCATTCGAAAAAGAGCTATAGAGCGCATGCCGTGATTCACGACGGCCTGACCTACCCCTGCCCAATCTGCGGCAAACTGTTCCAATGGAAGCGCAACCTGGCGCGACACTCGCGCAACCATCGCGAGCGACAGGCGGGCAACTTGCACGAGTGCCGCGCTTGCAGCAAGACCTTCGCGAGCAGGGACTGCTACAACAACCATATGCGGCTCAGCAAGAAGCACGTGTCGCAGGATACTTTCCAACACGAATGTAACTACTGCGGAAAGAAGTTCGCTACAAAATGGCGCCTGACCGACCACATCGACTGTGATCACTTGAAGAAAATCAAATACCAATGTTCCTTCTGCTTCAAGGCATTCAAAACGGCTAAAATATTGGTGGCTCACGTCAATAATATACACGAGGGAAAGAAAAAAGAAGTGGAGGGCGAACATCTGTGCGAAATCTGTGGGAAATCATACAGGACAGTGAAACGTCTAAAGGGCCACGTATGGGCGATGCACACCAAACGGTCGAACAGCAAGATATACAAATGTAAGCTCTGTCCGGCTACCTTCATGTGGCAGACTAGCATCTACAGGCACATGAAGATGATGCACGACAATAATAAGAGTAAGGTGAGGATAACTTACACACCCGTACCCTACACCCCACACACTCGCTCCACAAACTTACGACACTCTAAACAAACACAACCCCTTCTTTGA
Protein Sequence
MKEVNINIEGYNVNGICVGCLNYNRQMFYHPSVKECFRLLGNIDVPDGLEVQVCWECLARVKSAINFKEQMLKSYDFLISYSKEHTFLDSPNDFGPHATINMERTAVECYECLPEAEVVEDTDTAVDVKEEEEIEDKYGFEVTIKENTLDDPYFQDMPTVDNDITSDEDMQLTKLNEKETEKVRKKITSEKKKERERDRMPANKRPRKTTRGLYDIAQFEAAYDQVVNHGVSVRRAAKMFDITHVTLQRYKKRRQTTSFPVKVGYARNSFYTADQETLLTKYLTKYAEIYPGLCVRVVRKYATEFSQKLGLKTPKSWVDNEMAGVDWYKNFMYRNTALKDKIVRQTAKEKLRVFYDRLWSILCQYNFGSENIYSLDEIGVNIEEFRDKIWLMTTKNGPMALKESKVLFTYAANAKGRGGASMCDGASQSMRELAECFGTSNSRDYSVLEELKDTFELVVNEAYRRYVISPFISQVESPKRQKTKKDKNPDKKSRKLKNLPEELVELYTMSKEDMWAIRIEDLNSKEFQKLKYRCDDCIIAFNTEKLMHDHLNGKHQPKSEHCQLCSICQAYFLKDNVAAHKALHQQGYKCRECGFNTTLKRRMLKHVGSHAPSEDAHVCQACGTSFSTKSKLTYHRDVCCQERPQCDCCGKVFANKVTLKYHLKILPQNKDDKPKEKLFIPCKGCDKVFHSKKSYRAHAVIHDGLTYPCPICGKLFQWKRNLARHSRNHRERQAGNLHECRACSKTFASRDCYNNHMRLSKKHVSQDTFQHECNYCGKKFATKWRLTDHIDCDHLKKIKYQCSFCFKAFKTAKILVAHVNNIHEGKKKEVEGEHLCEICGKSYRTVKRLKGHVWAMHTKRSNSKIYKCKLCPATFMWQTSIYRHMKMMHDNNKSKVRITYTPVPYTPHTRSTNLRHSKQTQPLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01094841;
90% Identity
iTF_00123720;
80% Identity
iTF_00123720;