Ncom019767.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Neria commutata
Gene Symbol
Lztr1_1
Assembly
GCA_963457695.1
Location
OY735249.1:16288580-16291441[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3e-13 9.5e-11 42.3 0.2 1 107 383 522 383 525 0.88
2 3 0.15 48 4.6 0.2 77 108 524 555 520 557 0.90
3 3 1.1e-17 3.5e-15 56.6 0.0 8 97 616 705 610 720 0.85

Sequence Information

Coding Sequence
ATGTCGCACTCTACATCGAGCTCGATGCGTGGCGGTGGCAGAAGTGGTGGCGGCGGAGGTGCCTACGATGCAGCAACAAGCAGCAGCTCCAAATCTGTATCACCTGGGAGCTATAGCTGCAATGCTTTGAATGTGGATTTCAGCACCTACACAGCGACACTCCAATGGACAAAAACGCTTGATTGTGCAGAGTTTGTGGGTGCTAAACGAAGTAAGCATACTGTGGTAGCCTATAAGGATGCAATGTTTGTGTTCGGCGGCGACAATGGCAAGAACATGCTTAACGATCTGATACGCTTTGGCGTGAAGGACAAGTCGTGGGGACGTGCGTGTGCCACGGGCACTCCGCCCGCGCCACGATATCATCATTCCGCTGTGGTTTTTGGCAGCTCTATGTTCGTTTTCGGTGGCTACACAGGAGACATTCACTCGAACTCGAATCTGACGAATAAGAACGATCTGTTCGAGTACAAGTTTCAAAGTGCTATGTGGGTAGAGTGGAAATTCTCTGGGCGCATGCCAGTGCCACGTTCAGCACATGGCGCAGCCGTCTATGACAACAAAATGTGGATTTATGCCGGTTACGATGGCAATGCACGTTTGAATGACATGTGGACTTTTAACTTGTCGGGCGAGAACCATCAATGGGAAGAGGTGGAACAGAAGGGTGAACGTCCGCCCACATGCTGTAACTTCCCGGTGGCCGTTGCGCGTGACTGTATGTATGTCTTTTCCGGTCAAAGCGGCCTGCAGATTACCAATTCGCTCTTCGAGTTCCACTTTAAAACCAAAACTTGGCGGCGTATATCTAATGAACATGTGCTGCGTGGCGCCACTTCTGCGCCACCCTCTCGCCGCTACGGACACACCATGGTGCATCATGATCGTTTTCTATACGTCTTTGGTGGCTCAGCCGACTCTACTTTACCCAACGATTTGCATTACTACGATCTGGACTCCCAGGTGTGGTCTGTGATTGCTCCGGAACCGAACTCGGATGTGCCCTCGGGCAGGGTGTTTCATGCCAGTGCCGTCATCGGAGATGCCATGTACATTTTTGGTGGCACTGTGGACAACAGCGTGCGTCGCGGCGATACCTATCGCTTCCAGTTCTCCAGCTATCCGAAGTGCACGTTGCGCGACGATTTCAGCAAGTTCATGAATGAGAAGCAATTCTGCGACATACAATTTATTGTGGGTCCAGAAGAGATAAAAATACTGGCACACATAGCTTTTGTGGCAGCGCGCTCCAAGTATTTGCGCACGAAGATTTTAGCGGCACGAGATGCGAGGCAGCAGCAAATGGAGAAGGTGTTTGGCGCTAACGTGGATGTGCAGTCGTTGAGTGGTGGCGCTGGCGGGGAACGTGCGCCCATGCTGGAAGTGCGCTTGAGCAGCGCCTCGCCAGAGGCTTTCGAAATCATACTGAACTACATATACACCGATCGCATTGATCTGAAGGATACGTACAGCAAGAACATTATCATACTGATTACGGACATCTACCAACTGGCTGGTTTGTTTCTGATGCCGCGCCTGGCGCAGGGTTGTATACAGTATTTGGACTTCAAAATTAACAAACAGAATGTTCTGGAGGCGCTCTACAATGCGGATAAGAACAAAATACAAATCATCAAAGATCACTGCATGCAGTTCATTACCAAGGAGGAGAACTTCACCGATGTGGTCATGTCCAGCGAATTCAGCGATTTGGATAAGCCATTGCTGGTAGAGATCATACGGAAACGATTGAACCCCTGCAAAATGGTGGTAGATGCCAATTTTGAAAAGAATGTGGGCACTACCTTGGAAAGCGACATGGCCGTGTTTTTGGAATCGACTGGCAAAGATTTTTGCGATATAAATTTGATGTTGGACGGGCTCATTATACCAGCGCATAAATCCATTCTATCGGCACGCTGTTCGTATTTTCAAGCCATGTTTAGATCCTTCATGCCGCCGGATAATACGGCTAATATACAAATTGGCGAGATATCACCCTCGCGCGAGGCATTCGAGTCACTGCAacgttttatatattatggCGAAACGAAATTGCCGCCGCAAGATGCACTCTACCTGTTTCAGGCGCCCTGCTTCTATGGCTTATCTAATAATCGCCTGCATGCCTTTTGCAAATATTCTCTGGAACATAATATAACCTATGAAAACGTGTTGCAAACATTAGAGGCTTCGGATATTACCAAAATCTATGATATCAAGGAGTATGCGTTAAAGTTGATTGTTAAGGATTTCGCTAAAGTGGCACAGTTACCGAAAATATGCGGGTTGTCGCGGGAACTGCTGCTGGAGATAATACGCGCCGTTGCAGATTCCCAAGGCGAGTTTCTGACGCGCATCAGCATCAACACCGACATCTGA
Protein Sequence
MSHSTSSSMRGGGRSGGGGGAYDAATSSSSKSVSPGSYSCNALNVDFSTYTATLQWTKTLDCAEFVGAKRSKHTVVAYKDAMFVFGGDNGKNMLNDLIRFGVKDKSWGRACATGTPPAPRYHHSAVVFGSSMFVFGGYTGDIHSNSNLTNKNDLFEYKFQSAMWVEWKFSGRMPVPRSAHGAAVYDNKMWIYAGYDGNARLNDMWTFNLSGENHQWEEVEQKGERPPTCCNFPVAVARDCMYVFSGQSGLQITNSLFEFHFKTKTWRRISNEHVLRGATSAPPSRRYGHTMVHHDRFLYVFGGSADSTLPNDLHYYDLDSQVWSVIAPEPNSDVPSGRVFHASAVIGDAMYIFGGTVDNSVRRGDTYRFQFSSYPKCTLRDDFSKFMNEKQFCDIQFIVGPEEIKILAHIAFVAARSKYLRTKILAARDARQQQMEKVFGANVDVQSLSGGAGGERAPMLEVRLSSASPEAFEIILNYIYTDRIDLKDTYSKNIIILITDIYQLAGLFLMPRLAQGCIQYLDFKINKQNVLEALYNADKNKIQIIKDHCMQFITKEENFTDVVMSSEFSDLDKPLLVEIIRKRLNPCKMVVDANFEKNVGTTLESDMAVFLESTGKDFCDINLMLDGLIIPAHKSILSARCSYFQAMFRSFMPPDNTANIQIGEISPSREAFESLQRFIYYGETKLPPQDALYLFQAPCFYGLSNNRLHAFCKYSLEHNITYENVLQTLEASDITKIYDIKEYALKLIVKDFAKVAQLPKICGLSRELLLEIIRAVADSQGEFLTRISINTDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00891953; iTF_00480226; iTF_00653602; iTF_00618467; iTF_01356997; iTF_00693921; iTF_00664162; iTF_00664930; iTF_00672898; iTF_01541508; iTF_01396613; iTF_00389703; iTF_00314408; iTF_01116520; iTF_00188233; iTF_00984329; iTF_00688749; iTF_01542285; iTF_00672271; iTF_00311888; iTF_00313552; iTF_01223504; iTF_00991890; iTF_00894035; iTF_01522739; iTF_00316052; iTF_00312693; iTF_01044790; iTF_00315256; iTF_00311129; iTF_00427323; iTF_00310332; iTF_00694749; iTF_01318333; iTF_00240830; iTF_00426462; iTF_00671646; iTF_01521183; iTF_00671008; iTF_01521952; iTF_01254026; iTF_00724864; iTF_01300973; iTF_00976590; iTF_00974800; iTF_01300119; iTF_00665753; iTF_00665757; iTF_01364005; iTF_01115078; iTF_01114319; iTF_00384638; iTF_00750533; iTF_00748289; iTF_00749030; iTF_00747540; iTF_00746783; iTF_00160808; iTF_00363334; iTF_01224678; iTF_00523752; iTF_00190025; iTF_01563849; iTF_00193636; iTF_00992717; iTF_01045549; iTF_00190736; iTF_00192155; iTF_01358076; iTF_00303869; iTF_01562975; iTF_00191424; iTF_00083041; iTF_00083042; iTF_00081330; iTF_00083038; iTF_00083039; iTF_00083040; iTF_01189578; iTF_00091402; iTF_00192881; iTF_00979412; iTF_01486285; iTF_01415115; iTF_01181247; iTF_00366573; iTF_01023088; iTF_01426747; iTF_00351926; iTF_00624817; iTF_00062864; iTF_00061197; iTF_01540432; iTF_00643300; iTF_00644213; iTF_01297589; iTF_00967281; iTF_01109397; iTF_01313069; iTF_01314753; iTF_01376706; iTF_00350243; iTF_00892835; iTF_01174340; iTF_01397540; iTF_01074565; iTF_00045414; iTF_00817510; iTF_01165606; iTF_01259272; iTF_00975689; iTF_01201706; iTF_00816621; iTF_01194477; iTF_00371150; iTF_01374158; iTF_00899695; iTF_01235824; iTF_01315569; iTF_01237746; iTF_00997811; iTF_01138099; iTF_01231667; iTF_01398579; iTF_00655381; iTF_00760181; iTF_00199958; iTF_00258966; iTF_01261078; iTF_00435639; iTF_01236792; iTF_01427544; iTF_00922171; iTF_01175195; iTF_00900701; iTF_00741950; iTF_00259839; iTF_01177023; iTF_01399552; iTF_00234998; iTF_01461249; iTF_00424738; iTF_00455011; iTF_01431012; iTF_00937382; iTF_01432136; iTF_00936654; iTF_01519411; iTF_00877173; iTF_00453656; iTF_00717880; iTF_01256474; iTF_01049756; iTF_00628447; iTF_01183904; iTF_01043945; iTF_00118785; iTF_00202693; iTF_01127559; iTF_00322632; iTF_00999724; iTF_01088588; iTF_00014096; iTF_01375920; iTF_00324503; iTF_00203642; iTF_01404982; iTF_00797819; iTF_01051260; iTF_01313884; iTF_01395900; iTF_00257917; iTF_00972285; iTF_01132990; iTF_01470587; iTF_00679583; iTF_01375012; iTF_01019496;
90% Identity
iTF_00979412;
80% Identity
-