Nasi006438.1
Basic Information
- Insect
- Neoceratitis asiatica
- Gene Symbol
- Lztr1
- Assembly
- GCA_030068015.2
- Location
- CM061525.1:97866521-97869783[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.00051 0.13 12.7 0.0 1 54 508 560 508 572 0.81 2 4 1.4e-08 3.6e-06 27.4 0.0 46 107 580 648 567 651 0.85 3 4 0.13 32 5.0 0.2 77 109 650 682 646 683 0.90 4 4 1.6e-19 4.2e-17 62.6 0.0 8 105 742 841 736 846 0.85
Sequence Information
- Coding Sequence
- ATGCTGAAGGCTTTGCTCGGCTCAGAGTCTACAGATTCGACGGAAGACGGTGGGGGTGGCGCTGGCGCTGGCAACGGTAGTGCCGGCAGTGGCGGTGCTGGAGCAGGAGGCGGCAGTGGTGGCGGGGTTAACGGTAGTATAGCATCAAGCTCTATTTCCAGCAGCTTGAGCACGACGTGTGGCAGTGTCGTTGGCACGAGCAGTAACTGCAGTCAAACTAGTTGCGGCTTaggcggcaacaacaacagcagcacatTCGTTTGTAGTCCGGCCTCCAGCGGTTATTGCTCAGCCTGCCAAACGCACGTGGACAAGTGTCGAAGCAATTCAGGCAGTCGCAAGAGTCGTAAAGGCGCATCATCCCGTAGCAAAATGTCGCATTCCAATTCGAGTTCAATGCGTGGCAGTAGCGGAAGTAGTTGCCGCAGCACTGGtggcatgtgtatgtatgatatTGGTAGCTGCAAGTCAATATCACCGGGCAGTTATAGCTTGAATGCGCTGAATGTGGATTTCAGCTCATATACGGCTACGCATCAATGGTCGAAAATGCTCGAATGCGCTGAATTTGTGGGCGCAAAACGTAGCAAACACACGGTGGTCGCCTATAAGGATGCTATGTATGTCTTTGGTGGGGATAATGGCAAAACGATGCTTAACGATTTGATACGGTTTGGcgtaaaggacaaatcgtggGGACGTGCATGTGCAACGGGCGTGGCGCCGGCGCCGCGCTATCACCATTCGGCGGTCGTATATGGCAGCTCCATGTTCATCTTTGGTGGTTATACCGGCGATATACATTCGAACTCGAATTTAAcgaataaaaatgatttattcgaatataaatttcagaCGGCGATGTGGGTGGAATGGAAATTCACTGGGAGGGTGCCAGTACCGCGTTCAGCACACGGCGCTGCTGTTTATGATAACAAAATGTGGATTTATGCAGGCTACGATGGTAATGCACGGCTGAATGATATGTGGACGCTTAATTTGCTGGGCGAAAACCATCAATGGGAGGAGGTGGAGCAAAAAGGTGAGCGTCCGCCTACATGCTGCAATTTTCCAGTCGCCGTTGCACGGGACTGCATGTATGTCTTCTCCGGCCAAAGTGGTCTGCAGATCACCAATTCACTCTTCGAATTTCACTTTAAGACCAAAACCTGGCGGCGCATTTCCAACGAATCGGTATTGCGTGGCGCCGCCTCTGCGCCACCATCACGACGTTACGGCCATACTATGGTCCATCACGATCGCTTTCTGTACGTTTTCGGGGGCTCAGCTGACTCAACGTTACCGAATGATTTGCATTGTTATGATTTGGACTCGCAGGTGTGGTCTGTCATCGCGCCGGAGCCGAATTCGGATGTGCCTTCGGGTCGTGTCTTTCATGCCAGTGCCGTTATAGGCGATGCCATGTTCATTTTTGGTGGCACTGTCGACAATAGCGTGCGTCGTGGCGACACGTATCGCTTTCAGTTCTCCAGTTATCCGAAATGTACGCTACGCGATGATTTTGGCAAATTCTTTCACGACAAACAATTTTGTGACATACAATTTATTGTCGGTCCAGAGGAGATTAAAATTTTAGCGCACATCGCTTTCGTCGCAGCACGTTCGAAAAATTTGCGTACGAAAATTCTAGCAGCACGAGATGCGCGTCAACAACAAATTGAGAAAGTTTTCGGACCGGCTATGGATATGAGGAGCGCACTGGTGGGTAGTGGTGGTGCGGATCGTGCACCTATGTTGGAAGTGCGATTGGCGCAGGCATCGCCAGAGgcattcgaaattattttaaattacatctACACGGATCGTATCGATTTGAAGGATTCttatagcaaaaatataattatactgATAACCGATATATACCAGTTGGCGGGCAGGTTTCTGATGCCGCGATTAGCACAGGGCTGCATACAGTATTTGGATTTCAAAATCAACAAACAGAATGTGTTGGAAGCGCTGTACAATGCGGACAAGAATAAaatacaAATCATCAAGGATCACTGCATGCAGTTCATTATAAAAGATGAAAATTACGCCGATGTTGTAATGTCGAGTGAATTTGGCGATTTGGATAAATCCTTGATTGTGGAAATCGTGCGCAGACGCTTGAACCCTGGCAAAATcgtaatggaaaataattttgagaaaaatgatGGCACCACATTGGAAAGCGACATGGCCGTATTTTTGGAATCAACCGGCAAGGAGTTTTGCGATATCAACCTGATACTCGATGGTCAAGTTATACCGGCACATAAATCCATATTATCCGCACGCTGCACATACTTCCAAGGCATGTTTAGATCCTTTATGCCGCCCGATAATACGGTGAATATACAAATCGGTGAGATTTCGCCATCGCAAGAGGCCTTCCAATCGCTACTCCGTTACATTTACTATGGTGAAACGAAAATGCCACCACAGGACGCATTGTATCTCTTTCAGGCGCCCTGCTTCTACGGCTTATCAAACAATCGCTTAGCCGCTTTCTGCAAATATTCATTAGAGCATAATATCACATATGAAAATGTACTACAAACCCTTGAGGCCTCAGACATAACGAAAATCTACGATATCAAGGATTATGCACTGCGTTTGATTGTAAAGGATTTTACGAAAGTCGCACATTTGCCAAAAATAGGCGCTCTTTCACGTGAGCTGCTATTGGAAATTATACGTGCTGTGGCCGATTCGCAAGGCGAGTTTTTGACCCGCATCAGCCTCAATACTGAtatctga
- Protein Sequence
- MLKALLGSESTDSTEDGGGGAGAGNGSAGSGGAGAGGGSGGGVNGSIASSSISSSLSTTCGSVVGTSSNCSQTSCGLGGNNNSSTFVCSPASSGYCSACQTHVDKCRSNSGSRKSRKGASSRSKMSHSNSSSMRGSSGSSCRSTGGMCMYDIGSCKSISPGSYSLNALNVDFSSYTATHQWSKMLECAEFVGAKRSKHTVVAYKDAMYVFGGDNGKTMLNDLIRFGVKDKSWGRACATGVAPAPRYHHSAVVYGSSMFIFGGYTGDIHSNSNLTNKNDLFEYKFQTAMWVEWKFTGRVPVPRSAHGAAVYDNKMWIYAGYDGNARLNDMWTLNLLGENHQWEEVEQKGERPPTCCNFPVAVARDCMYVFSGQSGLQITNSLFEFHFKTKTWRRISNESVLRGAASAPPSRRYGHTMVHHDRFLYVFGGSADSTLPNDLHCYDLDSQVWSVIAPEPNSDVPSGRVFHASAVIGDAMFIFGGTVDNSVRRGDTYRFQFSSYPKCTLRDDFGKFFHDKQFCDIQFIVGPEEIKILAHIAFVAARSKNLRTKILAARDARQQQIEKVFGPAMDMRSALVGSGGADRAPMLEVRLAQASPEAFEIILNYIYTDRIDLKDSYSKNIIILITDIYQLAGRFLMPRLAQGCIQYLDFKINKQNVLEALYNADKNKIQIIKDHCMQFIIKDENYADVVMSSEFGDLDKSLIVEIVRRRLNPGKIVMENNFEKNDGTTLESDMAVFLESTGKEFCDINLILDGQVIPAHKSILSARCTYFQGMFRSFMPPDNTVNIQIGEISPSQEAFQSLLRYIYYGETKMPPQDALYLFQAPCFYGLSNNRLAAFCKYSLEHNITYENVLQTLEASDITKIYDIKDYALRLIVKDFTKVAHLPKIGALSRELLLEIIRAVADSQGEFLTRISLNTDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01055302;
- 90% Identity
- iTF_00303869;
- 80% Identity
- -