Ssin036748.1
Basic Information
- Insect
- Stratiomys singularior
- Gene Symbol
- Lztr1
- Assembly
- GCA_954870665.1
- Location
- OX940881.1:88072962-88076723[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.1e-14 6.4e-12 46.8 0.1 1 107 438 569 438 572 0.83 2 4 0.028 17 6.8 0.1 76 108 570 602 567 604 0.90 3 4 1.9e-21 1.1e-18 68.5 0.0 8 107 663 764 657 767 0.86 4 4 7.3 4.4e+03 -1.0 0.0 72 101 761 790 754 796 0.79
Sequence Information
- Coding Sequence
- ATGATTAAATCAATATTGGGCAAGGACGCAGCAGCGGCAGCAAATGTTGCAGAAAACAATAACGATGCATCATCATCAACGCGATCCGAACATTCGTCGAGTAGAAGAAGTGCTGGAGGTGGTGGAAACGATCGTGGCGGGGGAGGAAGCAGTAGTGGAAGTCAGCAACAGAAGGATGATTCTGATCAATCACACCACCACCATCAGTCGTCACAAAGGAAATTAACCAGTTCCAGCTCTACTTCGATTCGTGGTCAGAAATCTATTTCATCGAATAGTTTCAGTTCCAATATGCTCAATGTGGATTTTTCGTCATATACGCCAACACACCAATGGACAAAGACATTGGATTGTGCAGAGTTTGTTGGGGCAAAACGGAGCAAACATACCGTTGTTGCTTACAAAGATGCTATGTACGTGTTTGGTGGAGACAATGGTAAGAATATGTTGAACGACTTAATATGTTTTGGTGTGAAGGATAAATCCTGGGGACGAGCATACGCCACGGGACCCGCACCGGCACCTCGTTACCATCATTCCGCAGTTGTCTATGGCAATTCAATGTTCATATTTGGCGGATATACAGGCGatatatattcaaattcaaatctgacaaataaaaatgatttgtttgaGTATAAATTCCAAAGCGCACAATGGGTTGAATGGAAATTTGTTGGAAAACAACCAGTTCCACGATCAGCGCATGGGGCAGCTGTTTATGATCACAAATTATGGATATTTGCTGGGTATGATGGCAACGCACGATTGAATGATATGTGGACTGTCCCACTAAACACTGAGACTCATCAATGGGAAGAGATAGAACAAAAGGGAGATCGCCCACCGACATGTTGCAACTTTCCTGTGGCAGTTGCTCGcgattgtatgtatgttttttccGGACAGAGCGGCCTACAAATCACAAACGActtgtttgaatttcatttcaaatcaaaaacTTGGCGCAAAATTTCCAACGAACATGTTTTACGAGGTGCATGTCCACCCCCATCGCGACGATATGGTCATACAATGGTTCATCATGATCGATTCCTTTATGTTTTTGGCGGTTCTGCTGATTCAACACTGCCAAATGATTTGCACTGTTACGATCTTGATTCTCAGTGCTGGTCAGTTATAATTCCAGAGGCGAATTCCAATGTACCATCGGGACGAGTGTTCCATGCATCGGCCGTAATTGGTGATGCTATGTACATTTTTGGTGGAACTGTTGATAATAGTGTACGAAGAGGCGATACATATCGCTTCCAGTTTTCTAGTTATCCCCGATGCACTTTGCGAGATGATTTTGGCAAATTCTTCAACGATCGACAGTTCTGTGACATCCAGTTTGTTATTGGCCCAGAAGAGGTGAAAATTCCTGCACATATAGCACTCGTTGCTGCACGATCGaagtttttaagaaataaaattttAACGGCTCGCGATGCAAGAAATCAACATTTGGAGAAAGTTTATGGCAATCTAGATATACCTTACTCGGATCGTCCTACTGTTGAAGTCCGTCTGCCAAACGCAACTCCCGAAGCATTCGAAATTCTACTGAACTACATATATACGGACAAAATAGATTTAAAAGAATCATACACAAAGAATATTGTGATACTTATAACTGATATCTATCAGCTGGCTGGGCAGTTTCTGATGCCGCGTCTAGCACAAGGTTGTTTGCAGTATCtggaattcaaaatatcaaagagTAATGTGCTCGAAGCTTTGTACAATGCCGATAAAATGAAAATACAAATTATTAAAGACCATTGCATGGCCTTCATTGTAAAAGATGACAACTTTACTGATGTTGTGATGTCAAGCGAATTCAGTGATTTGGACAAACCACTGTTGGTGGAAATCATTCGAAAGAAATTAAATCCGGGAAAATTACAGATTGATACAAACTATGATAAAAATATTGGCTCCACTCTTGAAGCTGACATGGCTGTTTTCCTTGAATCGACTGGCAAAGATTTCTGTGACATAAACCTCGTATTGGATGGACACAAAATTCCTGCACACAAATCAATACTATCTGCTCGATGCACATATTTCCAAGCGATGTTTCGATCGTTTATGCCACCTGATAACACCGTCAATattCAAATTGGCGACATTTCCCCATCATTGGAAGCGTTCAACTCTCTTCTGCGCTACATATACTATGGCGAGACGAAACTGCCACCCCAAGATGCACTGTATTTATTTCAAGCACCATCCTTTTACGGATTGGCCAACAACCGCCTGCAGTCATTTTGCAAATACTCTTTGGAACATAATATCACGTACGAGAATGTTTTGCAGACGTTGGAAGCGGCAGACATAACAAAAGTGTTCGATATCAAGGAGCACGCACTGAAACTAATTGTAATGGAGTTTTCAACGgTGGCTCGGCTCCCGAAAATGGCAACATTAAGCCGCGAACTACTGCTGGAAATAATCCAAGCAGTTGCTGATGCACATGGCGAAGTCCTAATGTCAAACGATTTATCCTCAATCAGTATTAATACCGAACTTTGA
- Protein Sequence
- MIKSILGKDAAAAANVAENNNDASSSTRSEHSSSRRSAGGGGNDRGGGGSSSGSQQQKDDSDQSHHHHQSSQRKLTSSSSTSIRGQKSISSNSFSSNMLNVDFSSYTPTHQWTKTLDCAEFVGAKRSKHTVVAYKDAMYVFGGDNGKNMLNDLICFGVKDKSWGRAYATGPAPAPRYHHSAVVYGNSMFIFGGYTGDIYSNSNLTNKNDLFEYKFQSAQWVEWKFVGKQPVPRSAHGAAVYDHKLWIFAGYDGNARLNDMWTVPLNTETHQWEEIEQKGDRPPTCCNFPVAVARDCMYVFSGQSGLQITNDLFEFHFKSKTWRKISNEHVLRGACPPPSRRYGHTMVHHDRFLYVFGGSADSTLPNDLHCYDLDSQCWSVIIPEANSNVPSGRVFHASAVIGDAMYIFGGTVDNSVRRGDTYRFQFSSYPRCTLRDDFGKFFNDRQFCDIQFVIGPEEVKIPAHIALVAARSKFLRNKILTARDARNQHLEKVYGNLDIPYSDRPTVEVRLPNATPEAFEILLNYIYTDKIDLKESYTKNIVILITDIYQLAGQFLMPRLAQGCLQYLEFKISKSNVLEALYNADKMKIQIIKDHCMAFIVKDDNFTDVVMSSEFSDLDKPLLVEIIRKKLNPGKLQIDTNYDKNIGSTLEADMAVFLESTGKDFCDINLVLDGHKIPAHKSILSARCTYFQAMFRSFMPPDNTVNIQIGDISPSLEAFNSLLRYIYYGETKLPPQDALYLFQAPSFYGLANNRLQSFCKYSLEHNITYENVLQTLEAADITKVFDIKEHALKLIVMEFSTVARLPKMATLSRELLLEIIQAVADAHGEVLMSNDLSSISINTEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01055302;
- 90% Identity
- iTF_01088588;
- 80% Identity
- -