Matr018004.1
Basic Information
- Insect
- Machimus atricapillus
- Gene Symbol
- Lztr1
- Assembly
- GCA_933228755.1
- Location
- CAKOFS010000097.1:149350-152589[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.4e-14 1.1e-11 45.8 0.2 1 108 394 526 394 528 0.84 2 4 0.68 3.1e+02 2.5 0.1 77 108 527 558 525 560 0.90 3 4 5.1e-20 2.4e-17 64.1 0.0 8 97 619 708 613 723 0.85 4 4 7.6 3.5e+03 -0.8 0.0 72 106 717 751 709 754 0.84
Sequence Information
- Coding Sequence
- ATGTTGAAGGCTATCCTAGGAAGTGAATCGGATCCATCGGACAGTGGATGTGAGAAGTCGCGAAAAAGTCGCAGGGGAACTGCGCGGAAGATGTCGCATTCCAGCTCGAACTCAATTAAGGGCTATAAGTCGATCTCGCCCGGGAGCTTCAGCTGCAATGCCCTCAACGTCGACTTCTCCTCGTACACGGCGACCCACCAGTGGACAAAGACTTTGGAATGTGCCGAGTTCGTTGGAGCTAAGCGCAGCAAGCACACCGTGGTCGCGTATAAGGATGCGATGTACGTCTTCGGCGGGGACAACGGGAAGACGATGCTGAATGACCTGATCAGGTTCGGGGTTAAGGACAAATCCTGGGGAAGGGCATGTGCGACCGGAACTCCGCCGGCTCCACGGTATCACCACTCAGCAGTGGTATACGGAAGTTCAATGTTCATTTTCGGTGGGTACACCGGCGACATTCACTCGAACTCGAATCTGACCAACAAGAACGACTTGTTCGAATACAAGTTCCAGAGTGCGCAGTGGGTAGAGTGGAAGTTCACGGGCAGAACTCCTGTTCCGAGGTCTGCTCATGGGGCTGCTGTGTATGACCATAAACTTTGGATCTACGCTGGGTACGATGGAAACGCAAGACTTAACGACATGTGGACGTTGGATTTGACTGGTGATACTCATCAATGGGAAGAAATCGATCAGTTAGGAGATCGTCCTCCAACATGCTGCAATTTTCCTGTCGCAGTGGCAAGAGATTGTATGTACGTCTTCTCTGGACAAAGTGGACTTCAAATCACGAATTCCCTCTTTGAGTTTCACTTTAAGACCAAAACCTGGCGACGAATTTCAAATGAACACGTTCTACGAGGAGCATCAGCGCCGCCGTCCAGGCGATATGGTCATACAATGGTACACCACGACCGATTTCTATATGTTTTCGGAGGCTCAGCGGATACAACTCTTCCAAATGATTTGCATTGCTTCGACTTAGATTCGCAAGTTTGGAGCGTAATAACGCCTGAGGCAAACTCTCAGGTTCCTTCAGGAAGAGTTTTTCATGCCTCGGCAGTAATTGGAGATGCAATGTACATTTTTGGGGGCACCGTGGACAACAGTGTCCGAAGGGGTGACACATACAGATTTCAATTTTCAAGCTACCCTAAATGCACTTTACGTGACGATTTTGGTAAATTTTTCAATGAAAAACAATTTTGCGATATTCAATTCATCGTTGGACCGGAAGAGATAAAAATTCAAGCTCATATCGCTTTTGTGGCTGCACGATCAAAATTCTTACGAACGAAAATTCTGGCTGCTCGAGATGCACGAAACCAGCATTTGCAGAAGCTGTACGGGGGCTTGGATGTTACCTTCACCGAACGGCCGATGCTTGAAGTGAGACTTCTAAATGCGACCCCAGAGGCTTTCGAAATCATTCTTAATTATATCTACACTGATCGCATTGATTTGAAGGATTCCTACAGCAAAAATATTGTGATTCTGATCACGGACATTTACCAGTTAGCTGGACAATTTCTTATGCCCCGTCTTGCCCAAGGTTGCATCCAGTACTTAGAGTATAAAATATCTAAGACGAATGTCCTCGAGGCTCTTTATAATGCCGATAAGAACAAGATCCAAATAATCAAAGATCATTGCATGTCTTTCATTGTCAGGGATGAGAACTTCTCTGATGTTGTAATGTCTACTGAGTTTAGCGATTTAGATAAGCCTTTACTTGTGGAAATAATTAGAAAGAGACTTAACCCAGGGAAGACTGCTTGTGATGTGAATTTTGATAAAAGTGTTGGTACAACACTCGAAAGTGATATGGCAGTGTTTTTGGAATCAAGTGGAAAGGATTTTTGCGACATTCAACTTGTCCTGGATGGGCAAGTTATTCCAGCACATAAATCGATCCTTTCAGCACGTTGTTCTTACTTCCAAGCAATGTTTCGATCATTTATGCCCCCGGACAACACCGTTAATATTCAAATTGGAGAGATCTCACCATCTCTAGAGGCATTCAACTCCCTTCTCCGATACATTTACTACGGTGAAACAAAACTGCCTCCACAGGATTCGCTGTATTTATTTCAGGCCCCATGTTTCTACGGACTGTCCAACAACCGGCTTCACGCGTTTTGCAAATATTCTCTTGAACATAATATCACGTATGAGAACGTGCTTCAAACACTTGAAGCGTCTGACATAACCAAGGTCTACGACATAAAGGAGCACGCATTAAAGCTGATCGTGAAGGAGTTCCCAACGGTTGCAAGACTACCAAAAATGAATGCCCTCAGCAGGGATCTCCTTCTAGAGATCATCCGAGCTGTTGCAGACGCCCATGGAGAGTTCCTGATGACACAGGATTTATCCTCAATCAGTATTAACACAGATCTCTGA
- Protein Sequence
- MLKAILGSESDPSDSGCEKSRKSRRGTARKMSHSSSNSIKGYKSISPGSFSCNALNVDFSSYTATHQWTKTLECAEFVGAKRSKHTVVAYKDAMYVFGGDNGKTMLNDLIRFGVKDKSWGRACATGTPPAPRYHHSAVVYGSSMFIFGGYTGDIHSNSNLTNKNDLFEYKFQSAQWVEWKFTGRTPVPRSAHGAAVYDHKLWIYAGYDGNARLNDMWTLDLTGDTHQWEEIDQLGDRPPTCCNFPVAVARDCMYVFSGQSGLQITNSLFEFHFKTKTWRRISNEHVLRGASAPPSRRYGHTMVHHDRFLYVFGGSADTTLPNDLHCFDLDSQVWSVITPEANSQVPSGRVFHASAVIGDAMYIFGGTVDNSVRRGDTYRFQFSSYPKCTLRDDFGKFFNEKQFCDIQFIVGPEEIKIQAHIAFVAARSKFLRTKILAARDARNQHLQKLYGGLDVTFTERPMLEVRLLNATPEAFEIILNYIYTDRIDLKDSYSKNIVILITDIYQLAGQFLMPRLAQGCIQYLEYKISKTNVLEALYNADKNKIQIIKDHCMSFIVRDENFSDVVMSTEFSDLDKPLLVEIIRKRLNPGKTACDVNFDKSVGTTLESDMAVFLESSGKDFCDIQLVLDGQVIPAHKSILSARCSYFQAMFRSFMPPDNTVNIQIGEISPSLEAFNSLLRYIYYGETKLPPQDSLYLFQAPCFYGLSNNRLHAFCKYSLEHNITYENVLQTLEASDITKVYDIKEHALKLIVKEFPTVARLPKMNALSRDLLLEIIRAVADAHGEFLMTQDLSSISINTDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01055302;
- 90% Identity
- iTF_00234998;
- 80% Identity
- -