Mmin004664.1
Basic Information
- Insect
- Mycalesis mineus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_034621355.1
- Location
- CM067885.1:1811669-1824679[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-76 5.2e-72 243.4 24.0 1 268 114 375 114 394 0.91 2 2 1 3e+04 -7.3 17.0 1 48 395 441 395 469 0.70
Sequence Information
- Coding Sequence
- ATGGCAAAAAGATCGCAGTACGCAACTCCTGATAACAGCGATGAAGAAAGTGGCGACGCGTTTACAGACGGTGATTTTGGTGATTCCGATGATGAAACTGTCATTGAACGCAAGGACTATGTCACCGAAACTATAAATGAAAACATTGACACGACAGATGACGTGAATACCTGTGTAGATGAACAAGTGAACGGCCACACAATGAAGGTTAATGTGAATGGTGCTGATTACATAGATGTAAACAATCAAAGCAATGGCGAAGAATCTGGGGACTTGTCTAGAGATTCACAAAGCGACAATGGCTCCATCGTCGGAATACTTGGCGACCAACACAATCACGCAGAACAGCGGCTGGCGGCGCGACGGGCAGCGCGGGCGGAAGCGCGGGAGATTCGCATGCGCGAGCTGGAGCGCCAGCAGCGCGAGCAGGAGGACCATGCCGACAAGGCGTACGACATGTACTCGGAGACAGTGGGGCGGCGCGCAGGCAGCCGGCTCGTGGCGCTGAGTCCCAGCACCATGCACTCGCCGCGACGGAGTTCCGAGGATTCCGACGACGTGCTGAGCATCAAAGACCTCAGGcATGAGCTCAAAGAGGTCGAAGAGAAGTTCCGAAAGGCGATGATATTGAACGCTCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTCGAACTGCTGAAAGATAGAATAGAGGAGCTGCAGGAGGAATACGCGCAACTacagCGCGAGCACCGGGAGAAGTGCTCGAGCCACGAGCGGCTGAAGCGCGAGCACGCGGCGCTGGAGCGGGAGCTGGTGCTGGCGCGGGACGCGGTGCGCGCGCGggacgcggcggcggcggcggcggggcaGGCCTTCGTGGAGGCGGCCAGCGCGCCCGACGCGGTGCCCGGCGCCGCCGCCGGCAGCGTGCCGCCGCTGGCGCTCGTGTCGCACGCCTCCGAGCAGCTGCTGGCCGAGGCGGGCGAGGGCACGCTCGACGTGCGGCTGGAGCGGCTGGCGAGTGCGCGCGCGGCTCTGGAGGGCGAGGTGCGCAAGCTGAAGCTGCAGCTCAACGACGAGCGCGCGGCGCGGCACAACGGCGTCGCCTCGCACCTCGACCGCGACCACGACACCGAGCTGGAAACCCTACGGAAGTCAGTGGCTGAGGCAAAAGGACGCGCAGCTCGCGCCGAGGCCGAGGCGGCGCTgcaggcggcggcggtggcgcgTCTCGAGGCGCAGGTGGCGCGGCTGCGCGCGAGGCAGGACCACCAGGACGAGCACGAGGAGATGCTTAAACAGGAGAGGAGGAAACTGCAGAGGGAGGCGCGGGAAGCTCTCAACCGAGTTGAGGAGCTAGAGACTGAGAACAGCCACCTCACCAAGAGGCTCGACAAGCTCAAGAACGCGAAGTCCGCGCTCCTTAAGGACCTGTGA
- Protein Sequence
- MAKRSQYATPDNSDEESGDAFTDGDFGDSDDETVIERKDYVTETINENIDTTDDVNTCVDEQVNGHTMKVNVNGADYIDVNNQSNGEESGDLSRDSQSDNGSIVGILGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYSETVGRRAGSRLVALSPSTMHSPRRSSEDSDDVLSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHREKCSSHERLKREHAALERELVLARDAVRARDAAAAAAGQAFVEAASAPDAVPGAAAGSVPPLALVSHASEQLLAEAGEGTLDVRLERLASARAALEGEVRKLKLQLNDERAARHNGVASHLDRDHDTELETLRKSVAEAKGRAARAEAEAALQAAAVARLEAQVARLRARQDHQDEHEEMLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00205138; iTF_00801866; iTF_00954478; iTF_00953528; iTF_00354102; iTF_01018582; iTF_00642334;
- 90% Identity
- iTF_00205138;
- 80% Identity
- -