Mjur015476.1
Basic Information
- Insect
- Maniola jurtina
- Gene Symbol
- lrrfip2
- Assembly
- GCA_905333055.1
- Location
- HG995210.1:1605125-1631589[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-77 8.2e-73 245.7 21.7 1 264 76 333 76 353 0.90 2 2 1 2.3e+04 -7.2 17.0 1 48 357 403 357 430 0.70
Sequence Information
- Coding Sequence
- ATGATGGTACGTCTCGGATTAGCTATGGTGGTAGGAGTAGCGCCGGCGCTAGTGTCGTGGTGGCGGGGTCAAGGTCCATGGCTGCCTCCACCGTTGGCGCAAAGCCCCTGCTCGGAGAAGTCCCTCAAATGGCCGCGACGATCACCGTCTCTATCGGATTGCCTGGAGAGCTCCAGCGATGAAGATTCCGCCAGATCCATTGTCTGCCACGTGAGACCTAAAGTTGCGGAGCAGCGTCTGGCGGCGCGGCGCGCGGCGCGTGCGGAGGCGCGCGACATCCGCATGCGCGAGCTGGAGCGGCAGCAGCGTGAGCAGGAGGACCATGCCGACAAAGCCTATGACATGTACTCAGAGACAGTGGGGCGGCGCCCCGGCGGGCGGTTGGCGGCGCTGAGCCCCAGCGCGATGCACTCCCCGCGACGCAGCTCAGAGGACTCGGACGACGTGCTTAGCATCAAAGACCTCAGGCATGAGCTTAAAGAAGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCCCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTCGAACTGCTCAAGGACAGAATAGAGGAGCTGCAGGAGGAATACGCGCAGTTACAGCGGGAACACAGAGAGAAGTGCTCGTGCTACGAGCGGCTGAAGCGGGAGCACGCGGCGCTGGAGCGCGAGGTGGCGCTGGCGCGGGATGCGGTGCGCGCGCGCGACGCGGCGGCGGCGGCGGCCGGCCGCGCCTTCGTGGAGGCGGCCAGCGCGCCCGACGCCGACGCGGGCGCGGCGTGCGGCAGCGTGCCACCGCTGGCGCTCGTGTCGCGCGAGTCGGAGCAGCTGCTGAACGAGGCGGGCGAGGGGACCTTAGACGTGCGGCTGGAGAGGCTGGTGGGCGCGAAGGCGGCGCTGGAGAGCGAGGTGCGCAAACTGAAGCTACAGCTGAACGACGAGCGCGCGGCGCGCCAGAACGGCGTCGCCTCGCATCTGGACCGCGACCACGACACTGAGTTGGAGGCGCTCCGCAAGTCTGCCGGCGAGGCGAAGGGCCGCGCGGCCCGCGCCGAGGCGGAGGCGGCGCTGCAGGCGGCGGCCGTGGCGCGGCTCGAGGCGCAGGTGGCGCGGCTGCGCGCGCGGCAGGACCACCAGGACGAGCACGAGGAGATGCTGAAGCAGGAGCGGAGGAAGTTGCAGAGAGAGGCGAGGGAAGCTCTCAACCGGGTGGAGGAGCTGGAGACAGAGAACAGCCACCTCACCAAGCGCCTCGACAAACTCAAGAACGCCAAGTCTGCACTGCTCAAGGACCTGTGA
- Protein Sequence
- MMVRLGLAMVVGVAPALVSWWRGQGPWLPPPLAQSPCSEKSLKWPRRSPSLSDCLESSSDEDSARSIVCHVRPKVAEQRLAARRAARAEARDIRMRELERQQREQEDHADKAYDMYSETVGRRPGGRLAALSPSAMHSPRRSSEDSDDVLSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHREKCSCYERLKREHAALEREVALARDAVRARDAAAAAAGRAFVEAASAPDADAGAACGSVPPLALVSRESEQLLNEAGEGTLDVRLERLVGAKAALESEVRKLKLQLNDERAARQNGVASHLDRDHDTELEALRKSAGEAKGRAARAEAEAALQAAAVARLEAQVARLRARQDHQDEHEEMLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01021247;
- 90% Identity
- iTF_01080733;
- 80% Identity
- -