Bany004564.1
Basic Information
- Insect
- Bicyclus anynana
- Gene Symbol
- lrrfip2
- Assembly
- GCA_947172395.1
- Location
- OX359209.1:1647577-1661483[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-75 3.6e-71 240.1 23.1 1 268 119 380 119 399 0.91 2 2 1 2e+04 -7.4 17.1 1 48 400 446 400 475 0.70
Sequence Information
- Coding Sequence
- ATGGCAAAAAGGTCACAGTACTCAACTCCCGAAAATAGTGATGAAGAAAGTGGCGACGCGTTTACAGACGGCGACTTTGGGGATTCCGATGATGAAACTATCATTGAACGCAAGGACTACAAGTCCAAAGTCATCGAAACTGTGAATAAAAACATTGATACAACAGATGACACTAATACGAGTATTAGTTTAGATGAACAAGTGAACGGCCACACAATGAAGCTTAACGTTAATGGTGCTGATTATGTAGATATAAACAATCAAAGTAATGGCGAAGAATCTGGGGATTTGTCAAGGGACTCCCAAAGCGACAATGGCTCCATCGTCGGAATTCTTGGCGATCAGCATAATCACGCCGAGCAGCGGCTGGCGGCGCGGCGCGCGGCGCGGGCGGAGGCGCGCGAGATCCGCATGCGCGAGCTGGAGCGGCAGCAGCGCGAGCAGGAGGACCATGCCGACAAGGCGTACGACATGTACTCCGAGACCGTGGGGCGGCGCGCAGGTAGCCGGCTAGTGGCGCTAAGTCCCAGCGCCATGCATTCGCCGCGACGGAGCTCCGAAGACTCGGACGACGTGCTGAGCATCAAAGACCTCAGGCATGAGCTCAAAGAGGTGGAGGAGAAGTTCCGGAAGGCGATGATATTGAACGCCCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTCGAGCTGCTCAAAGATAGGATAGAAGAGCTTCAGGAAGAATACGCGCAACTACAGCGCGAGCACAGGGAGAAGTGCTCGAGCCACGAGCGGCTAAAACGCGAGCACGCAGCGTTAGAGCGCGAGCTGTGTTTGGCGCGGGACGCGGTGCGTGCGCGGGACGCGGCGGCGGCGGCGGCGGGGCAGGCCTTCGTGGAGGCGGCCAGCGCGCCCGACGCGGTGCCAGGCGCCGCCGCTGGCAGCGTGCCGCCGCTGGCGCTCGTGTCGCACGCCTCCGAGCTGCTGCTGGCTGAGGCGGGCGAGGGAACGCTCGACGTGCGGCTGGAGCGGCTGGCGAGCGCGCGCGCGGCGCTGGAGGGCGAGGTGCGCAAGCTGAAGCTGCAGCTCAACGACGAGCGCGCCGCGCGCCACAACGGCGTCGCCTCGCACCTCGACCGCGACCACGACTCCGAGCTGGAAACACTACGCAAATCCGTGGCCGAGGCGAAGGGACGCGCGGCTCGCGCCGAGGCCGAGGCGGCGCTGCAGGCGGCGGCGGTGGCGCGCCTCGAGGCACAGGTGGCGAGGCTGCGCGCGAGGCAGGACCACCAGGACGAGCACGAGGAGATGCTCAAGCAGGAGAGGAGGAAACTGCAGAGGGAGGCGAGGGAAGCTCTCAACCGAGTTGAGGAGTTGGAGACGGAGAACAGCCACCTCACCAAGAGGCTCGACAAGCTCAAGAACGCAAAGTCCGCGCTCCTCAAGGACCTGTGA
- Protein Sequence
- MAKRSQYSTPENSDEESGDAFTDGDFGDSDDETIIERKDYKSKVIETVNKNIDTTDDTNTSISLDEQVNGHTMKLNVNGADYVDINNQSNGEESGDLSRDSQSDNGSIVGILGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYSETVGRRAGSRLVALSPSAMHSPRRSSEDSDDVLSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHREKCSSHERLKREHAALERELCLARDAVRARDAAAAAAGQAFVEAASAPDAVPGAAAGSVPPLALVSHASELLLAEAGEGTLDVRLERLASARAALEGEVRKLKLQLNDERAARHNGVASHLDRDHDSELETLRKSVAEAKGRAARAEAEAALQAAAVARLEAQVARLRARQDHQDEHEEMLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01021247;
- 90% Identity
- iTF_01021247;
- 80% Identity
- -