Ehyp019117.1
Basic Information
- Insect
- Elymnias hypermnestra
- Gene Symbol
- lrrfip2
- Assembly
- GCA_015832385.1
- Location
- JACTOM010000906.1:48810-68607[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-76 8.8e-72 242.6 26.3 1 268 123 384 123 407 0.86 2 2 1 2.9e+04 -7.6 16.1 1 47 404 449 404 479 0.58
Sequence Information
- Coding Sequence
- ATGGGCAATAGCTCGGAATTTGCAACACCTGAAAACAGTGATGATGAAAGCGGCGATGCTTTCACAGACGGTGACTTCTGTGATTCTGATGATGAGACTATCGTAGAATGCAAAGCAGATTGTAAAACTTCTCATATACCTGTTAATGagactgtaaataaaaatataactgatGACACAGATTGCCGAATTGAAGGACAAGTGAACGGGCACACTGTAGAGGTTAAAGGTGATGATATTGAAGACATGCACGATGTAAACAAACATAGTAACAGCGGAAACGGATCTATAGATGATTTACGCAGGGATTCCCAAAGCGACTGCAATGGATCTATAGTTGGATTTCTTGGAGATCAGCAAAGTCATGCAGAACAGCGCTTAGCGGCGCGACGAGCTGCCCGAGCCGAAGCGAGAGAGATCCGCATGCGAGAGCTCGAACGACAGCAAAGGGAACAGGAAGATCATGCAGACAAAGCGTATGACATGTATACAGAGACCGTGGGGCGGCGAGCAGGCAGCCGGCTGGCGGCTCTCAGCCCCAGCTCCATGCACTCTCCCCGACGCAGTTCCGAAGACTCAGATGACGTACTCAGCATCAAAGACCTCaggCATGAACTCAAAGAAGTCGAGGAGAAATTCCGCAAGGCGATGATACTGAACGCACAGCTGGATAATGACAAAGCAGCGCTCGGCTACCAGCTGGAACTGCTCAAAGATAGGATAGAAGAGCTCCAAGAGGAATACGCGCAGTTACatCGTGAACACAGAGAGAAGTGCTCGAGTCACGAGCGGTTGAAGCGGGAGCACCTGTCCCTCGAGCGGGAGGTGGTCGTGGCACGGGATGCGGTGCGGGCGAGGGATGCAGCGGCTGCAGCTGCTGGACGGGTGTTTGTGGAAGCGGCTGCAGCGCCAGAAGCTGAAGCCGGAGAAGCGTGTGGCAGCGTGCCTCCCCTGGCACTCGTCTCACATGAATCCGAACAGCTGCTCAACGACGCCGGAGAGGGGACACTCGACGTGCGGCTGGAGCGGCTGGCCGGCGCCAAGGCAGCACTGGAGAGCGAGGTGCGGCGGCTCAAGCTGCAGCTCAACGACGAGCGCGTCGCCAGGCAGAACGGCGTCGCCACGCACCTCGACCGCGACCACGACACGGAGCtagaGACGCTGCGTAAATCAGTAGCAGAGGCTAAAGGGCGTGCTGCTCGAGCCGAGGCCGAAGCAGCCTTGCAAGCCGCGGCTGTAGCCCGCCTGGAAGCCCAAGTTGCTCGTCTGAAAGCCAGGCAGGACCACCAGGACGAGCACGAGGAACTGCTCAAGCAGGAGAGGAGGAAACTTCAGAGAGAGGCGAGAGAGGCCCTCAATAGAGTTGAAGAGTTGGAAACCGAGAACAGCCACCTCACGAAACGACTGGACAAGCTCAAGAACGCCAAGTCCGCACTCCTCAAGGACCTGTGA
- Protein Sequence
- MGNSSEFATPENSDDESGDAFTDGDFCDSDDETIVECKADCKTSHIPVNETVNKNITDDTDCRIEGQVNGHTVEVKGDDIEDMHDVNKHSNSGNGSIDDLRRDSQSDCNGSIVGFLGDQQSHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYTETVGRRAGSRLAALSPSSMHSPRRSSEDSDDVLSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLHREHREKCSSHERLKREHLSLEREVVVARDAVRARDAAAAAAGRVFVEAAAAPEAEAGEACGSVPPLALVSHESEQLLNDAGEGTLDVRLERLAGAKAALESEVRRLKLQLNDERVARQNGVATHLDRDHDTELETLRKSVAEAKGRAARAEAEAALQAAAVARLEAQVARLKARQDHQDEHEELLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01021247;
- 90% Identity
- -
- 80% Identity
- -