Mhyp001694.1
Basic Information
- Insect
- Maniola hyperantus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_902806685.1
- Location
- NC:15928991-15947579[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-77 2.2e-73 246.7 20.3 1 264 110 367 110 387 0.91 2 2 1 1.3e+04 -7.2 16.8 1 48 391 437 391 464 0.70
Sequence Information
- Coding Sequence
- atggccaaaagaTCGGAGTTCGCAACTCCAGAAAATAGCGACGAAGAAAGTGGTGATGCGTTTACAGACGGCGATTTCGAAGATTCCGATGATGAGACTATAATTGAACGAAAGGACTACAAGTCCCATGTTACCGAAATTAACGAAACTGTAAATGAAAATGTTACGGACGATTCAAATAGCAGTGTAGAAGGACAAGTGAACGGCCACATGATGAAGATTAATGTCAATGATGCTGAATATGAAGATGTAAGCAATCAAAATAATGGGGAAGATTCACAATGCGATGGCTCCATCGTTGGAATACTCGGCGATCAACAGAACCACGCGGAGCAGCGgctggcggcgcggcgcgcggcgcgtgcGGAGGCGCGCGACATCCGCATGCGGGAGCTGGAGCGGCAGCAGCGCGAGCAGGAGGACCATGCCGACAAGGCCTATGACATGTACTCAGAGACAGTGGGGCGGCGCCCCGGCGGACGGCTCGCGACGCTGAGCCCCAGTGCGATGCACTCCCCGCGGCGCAGCTCAGAGGACTCGGACGACGTGCTTAGCATCAAAGACCTCAGGCATGAGCTCAAAGAGGTGGAGGAAAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTCGAACTGCTCAAGGACAGGATAGAGGAGCTGCAAGAGGAGTACGCGCAGCTACAGCGGGAACACAGAGAGAAGTGCTCATGCTACGAGCGGCTGAAGCGCGAGCACGCGGCGCTGGAGCGCGAGGTGGCGCTGGCGCGGGACGCGGTGCGCGCGCGcgacgcggcggcggcggcggccggCCGCGCCTTCGTGGAGGCGGCCAGCGCGCCCGGCGCCGACGCGGGCGCCGCGTGCGGCAGCGTGCCGCCGCTGGCGCTCGTGTCGCACCAGTCGGAGCAGCTGCTCAACGAGGCGGGCGAGGggactttagACGTGCGGCTGGAGAGGCTAGTGGGCGCGAAGGCGGCGCTGGAGAGCGAAGTGCGGAAACTGAAGCTGCAGCTGAACGACGAGCGCGCGGCGCGCCAGAACGGCGTCGCCTCGCACCTGGACCGCGACCACGACACCGAGCTGGAGGCACTCCGCAAGTCGGCCGGCGAGGCGAAGGGGCGCGCGGCTCGCGCCGAGGCGGAGGCGGCGCTGCAGGCGGCGGCCGTGGCGCGCCTCGAGGCGCAGGTGGCGCGGCTGCGAGCGAGGCAGGACCACCAGGACGAGCACGAGGAGATGCTGAAGCAGGAGCGGAGGAAGCTGCAGAGAGAGGCGCGAGAGGCCCTCAACCGAGTGGAGGAGCTGGAGACTGAGAACAGCCACCTGACCAAGCGCCTCGACAAACTCAAGAACGCCAAGTCTGCGCTGCTCAAGGACCTGTGA
- Protein Sequence
- MAKRSEFATPENSDEESGDAFTDGDFEDSDDETIIERKDYKSHVTEINETVNENVTDDSNSSVEGQVNGHMMKINVNDAEYEDVSNQNNGEDSQCDGSIVGILGDQQNHAEQRLAARRAARAEARDIRMRELERQQREQEDHADKAYDMYSETVGRRPGGRLATLSPSAMHSPRRSSEDSDDVLSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHREKCSCYERLKREHAALEREVALARDAVRARDAAAAAAGRAFVEAASAPGADAGAACGSVPPLALVSHQSEQLLNEAGEGTLDVRLERLVGAKAALESEVRKLKLQLNDERAARQNGVASHLDRDHDTELEALRKSAGEAKGRAARAEAEAALQAAAVARLEAQVARLRARQDHQDEHEEMLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01021247;
- 90% Identity
- iTF_00801866;
- 80% Identity
- -