Mdei012972.2
Basic Information
- Insect
- Morpho deidamia
- Gene Symbol
- lrrfip2
- Assembly
- GCA_029101505.1
- Location
- JAPJRL010000015.1:18386618-18406299[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.31 4.5e+03 -2.7 0.5 239 279 69 105 31 109 0.50 2 3 3.2e-76 4.7e-72 243.5 25.8 1 268 124 381 124 400 0.91 3 3 2 2.9e+04 -6.5 17.3 1 49 401 448 401 475 0.70
Sequence Information
- Coding Sequence
- ATGACGTTGGCTATGGGCAAAACATCGGAATTCGCGACGCCTGACAATAGTGAAGAAGAGAGTGGCGATGCTTTTACTGATGGCGATTTTGAAGAATCAGATGACGAGACGGTAATTGAGCGGACAAAcgattataaattacataagaCCGTTACTGAAGCAGCTAACACTGTAatcaatgtaaataataataattcagatGATGTAAATTGTTTGGAAGAACAAGTAAGCGgtcatacagtaaaaattaatggTTCAGATATTGAAACCAGTATTAACAACAACGATGAAGATTCTACGGACTTGAGAAGAGATTCCCAAAGCGACTGCGGTTCCATCGTTGGATTTCTTGGCGATCAACACAGTCATGCAGAACAGCGTCTGgcggcgcggcgggcggcgAGGGCGGAAGCGCGCGAGATCCGGATGAGGGAGCTGGAGCGGCAGCAGCGGGAACAGGAGGACCATGCCGACAAAGCGTACGACATGTACACAGAGACTGTGGGCCGACGCGCTGGCAGTCGACTAGCCGCCCTTAGCCCTAGCTCGATGCACTCGCCTCGTCGAAGCTCAGAGGATTCAGATGACGTGCTCAGCATCAAGGACCTTAGGCATGAACTTAAAGAAGTAGAAGAGAAGTTCCGGAAGGCGATGATATTGAACGCGCAATTGGATAACGACAAAGCGGCGCTCGGTTACCAGTTAGAGCTACTTAAGGACAGAATAGAGGAGCTGCAAGAGGAGTACGCACAACTACAGCGCGAACACAGGGAGAAGTGCTCCTCGCACGAGCGGCTGCGGCGCGAGCACGCGTCGCTGGAGCGCGAGGTGGCGCTGGCGCGGGACGCGGTGCGCGCGCGGGACGCGGCCGCCGCCGCCGCGGGCCGCGCCTTCGTGGAGGCGGCCGCGGGCGAGGGCGAGGCGTGCGGCAGCGTGCCGCCGCTCGCGCTCGTCTCGCACCACTCCGAGCAGCTGCTCAACGACGCCGGAGAGGGCACGCTAGatgtACGGCTGGAGAGGTTGGTGAGTGCTAAGGCGGCACTGGAAGGCGAGGTGCGCAAACTGAAACTACAGTTGAACGACGAGCGCGCCGCCAGACAAAATGGCGTCGCGTCCCATCTGGACCGGGATCATGACAGTGAATTGGAGACGTTACGCAAAGCAGTAGTGGACGCTAAGGGGCGGGCGACCAGAGCGGAAGCGGAAGCGGCTCTGCAAGCGGCTGCCGTGGCCCGCCTGGAGGCGCAGGTGGCCCGGCTGCGAGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAAGAGCGGCGGAAGCTGCAGAGAGAGGCCCGAGAAGCACTTAATCGAGTGGAAGAGTTGGAGACCGAGAACAGCCACCTAACGAAGCGGCTCGACAAACTGAAGAATGCAAAGTCGGCGCTCCTCAAGGACCTGTGA
- Protein Sequence
- MTLAMGKTSEFATPDNSEEESGDAFTDGDFEESDDETVIERTNDYKLHKTVTEAANTVINVNNNNSDDVNCLEEQVSGHTVKINGSDIETSINNNDEDSTDLRRDSQSDCGSIVGFLGDQHSHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYTETVGRRAGSRLAALSPSSMHSPRRSSEDSDDVLSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHREKCSSHERLRREHASLEREVALARDAVRARDAAAAAAGRAFVEAAAGEGEACGSVPPLALVSHHSEQLLNDAGEGTLDVRLERLVSAKAALEGEVRKLKLQLNDERAARQNGVASHLDRDHDSELETLRKAVVDAKGRATRAEAEAALQAAAVARLEAQVARLRARQDHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01021247;
- 90% Identity
- -
- 80% Identity
- -