Basic Information

Insect: Meliscaeva auricollis
Gene Symbol: -
Assembly: GCA_948107695.1
Location: OX403616.1:41474139-41481816[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.0014 0.13 13.2 3.3 1 23 43 65 43 65 0.98

2 28 4.3e-06 0.0004 21.0 1.2 1 23 72 94 72 94 0.97

3 28 0.00014 0.013 16.3 0.8 1 23 213 236 213 236 0.95

4 28 0.028 2.7 9.0 4.3 1 23 243 265 243 265 0.98

5 28 2.1 1.9e+02 3.2 1.8 1 20 273 292 273 294 0.92

6 28 0.038 3.5 8.6 0.1 3 22 306 325 304 325 0.91

7 28 6.3e-06 0.00059 20.5 1.2 2 23 338 359 337 359 0.97

8 28 9.8e-05 0.0091 16.8 1.8 1 23 366 388 366 388 0.96

9 28 0.14 13 6.8 0.3 2 23 402 423 401 423 0.94

10 28 0.012 1.1 10.2 0.2 1 23 501 524 501 524 0.96

11 28 0.3 28 5.8 0.4 1 21 533 553 533 554 0.93

12 28 7.8 7.3e+02 1.3 0.2 5 20 567 582 564 584 0.89

13 28 0.0036 0.34 11.8 2.7 2 23 595 616 594 616 0.98

14 28 1.7e-05 0.0015 19.2 0.7 1 23 623 645 623 645 0.98

15 28 0.003 0.28 12.1 2.7 1 23 792 815 792 815 0.98

16 28 0.0045 0.42 11.5 1.5 1 23 852 875 852 875 0.96

17 28 0.025 2.3 9.2 3.6 1 23 885 907 885 907 0.96

18 28 3.1e-06 0.00029 21.5 1.0 1 23 914 936 914 936 0.98

19 28 0.0017 0.16 12.8 0.1 2 23 960 982 960 982 0.96

20 28 0.00035 0.032 15.0 0.7 1 23 1023 1046 1023 1046 0.97

21 28 0.086 8.1 7.5 0.7 1 23 1083 1106 1083 1106 0.91

22 28 0.0018 0.17 12.8 0.7 1 20 1112 1131 1112 1132 0.95

23 28 9.8e-05 0.0091 16.8 1.9 1 23 1142 1164 1142 1164 0.98

24 28 1.5e-05 0.0014 19.4 0.3 2 23 1186 1207 1185 1207 0.95

25 28 0.00022 0.021 15.6 3.3 1 23 1213 1235 1213 1235 0.99

26 28 6.5e-07 6.1e-05 23.6 3.4 1 23 1241 1263 1241 1263 0.98

27 28 5.5e-07 5.2e-05 23.8 2.4 1 23 1269 1291 1269 1291 0.99

28 28 0.00023 0.021 15.6 0.2 1 23 1297 1321 1297 1321 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.0014	0.13	13.2	3.3	1	23	43	65	43	65	0.98
2	28	4.3e-06	0.0004	21.0	1.2	1	23	72	94	72	94	0.97
3	28	0.00014	0.013	16.3	0.8	1	23	213	236	213	236	0.95
4	28	0.028	2.7	9.0	4.3	1	23	243	265	243	265	0.98
5	28	2.1	1.9e+02	3.2	1.8	1	20	273	292	273	294	0.92
6	28	0.038	3.5	8.6	0.1	3	22	306	325	304	325	0.91
7	28	6.3e-06	0.00059	20.5	1.2	2	23	338	359	337	359	0.97
8	28	9.8e-05	0.0091	16.8	1.8	1	23	366	388	366	388	0.96
9	28	0.14	13	6.8	0.3	2	23	402	423	401	423	0.94
10	28	0.012	1.1	10.2	0.2	1	23	501	524	501	524	0.96
11	28	0.3	28	5.8	0.4	1	21	533	553	533	554	0.93
12	28	7.8	7.3e+02	1.3	0.2	5	20	567	582	564	584	0.89
13	28	0.0036	0.34	11.8	2.7	2	23	595	616	594	616	0.98
14	28	1.7e-05	0.0015	19.2	0.7	1	23	623	645	623	645	0.98
15	28	0.003	0.28	12.1	2.7	1	23	792	815	792	815	0.98
16	28	0.0045	0.42	11.5	1.5	1	23	852	875	852	875	0.96
17	28	0.025	2.3	9.2	3.6	1	23	885	907	885	907	0.96
18	28	3.1e-06	0.00029	21.5	1.0	1	23	914	936	914	936	0.98
19	28	0.0017	0.16	12.8	0.1	2	23	960	982	960	982	0.96
20	28	0.00035	0.032	15.0	0.7	1	23	1023	1046	1023	1046	0.97
21	28	0.086	8.1	7.5	0.7	1	23	1083	1106	1083	1106	0.91
22	28	0.0018	0.17	12.8	0.7	1	20	1112	1131	1112	1132	0.95
23	28	9.8e-05	0.0091	16.8	1.9	1	23	1142	1164	1142	1164	0.98
24	28	1.5e-05	0.0014	19.4	0.3	2	23	1186	1207	1185	1207	0.95
25	28	0.00022	0.021	15.6	3.3	1	23	1213	1235	1213	1235	0.99
26	28	6.5e-07	6.1e-05	23.6	3.4	1	23	1241	1263	1241	1263	0.98
27	28	5.5e-07	5.2e-05	23.8	2.4	1	23	1269	1291	1269	1291	0.99
28	28	0.00023	0.021	15.6	0.2	1	23	1297	1321	1297	1321	0.93

Sequence Information

Coding Sequence: ATGACCCAAATATCACATTTCTACATAAGACATAAAAAATCAAAGAAACCGTTGAAGACTCGCAGCCAACGTACCAACATGAGCACCCGAAGCAAAACAATAAAAACCAAATTAAAGTCGGGCCGTTTCGAGTGTGACCATTGTAGTAAAACATTTGCATGGAAAAAGGATCTCTTTCGCCATGAGAAATCTCATGAACCCAACACTAAGAAGTTCGCATGTCCTCATTGTGATCGTCGATTCATACGAAAGGATAAACTTCAATCACATGTGCTTGTTCATTTGGGTGGTATAGTAAAACCGCGTTGTTCAAAGGCCACTCTAGCATTCTCACGTCAATTGTATTCTGAGGAAAAATTCAAAGAAATTGTCTGCATGATTTGTAACTACGACAAATCGGGTAACATGAAAGAGCTCATCAGGCATATCAGTTTACACGACATGCAAAATGTTGAAGGTTTCGAAAATAGTGAGTGCGTAAAGAGATTCTACGCTGACAAGGACTTGCAAGAAGTCATGATGCTTATTGGCAATCAAATTGAACAGAAGGAGTTTGGAAAATTACATTCCAGTGTCAATGCAAATGGCTGCGAGATGGGTATCAGTGATTCGGATGAGAGCGATCCAGAAACATCGTACACATGTGAAATTTGCACTGAGGCCTTCAATAGGAAGCATAAGCTTATAGCACATTCGTTGTCTGGACATACTGTGGATGAGTGTCTATATAAATGCGAGAAGTGCAAATTGGAATTTACTAGCAAGGAAGTATTTGATAGTCACCAAAAGCACCACTGTAACAATGCAGACAAAGAGTTCCATTGTGAAAACTGCCCAGCTCGATTTGCTTGGCCTCAAAATCTTGCAAATCACAAATGTCACAAAGATAATGACTCTTCCAAGGACAAAACGGTTTGCGAACCTTGCGGAGAAGTATTTGCCACTCAAAAGGCTTTCCGTCTACATAAAAAGACAAAATGCGGCACGGTTAAGCTTGACCAAGAGAGCACAACCTGTGAAATTTGCAATAAAGTCTTTAGTTTTCCCAGAGATTTGAGGAAGCATAAAAAAATTCACATACCGGACGGTAAGTCTCATGATTGTTCTATATGTGGCGAGAAATTCCTGCGTTCGGACAATCTTCGAAATCATTTGAAATCGCATACCAGTAAGGTTGAACGGCCCCTCTTACCGAAGAAATTAGTGTGCATGCTATGTGGCGATAAATTTACAACCATCGGTAGTTTAAGATACCATTTATTCAATCATTCCGATGGTCAAAGTGAGATCGACTTTGAAAATTCCGGATTCGTTTTGAACTTCTATCCTGGCGTGGGCAAAGAAGTTGTCTCCGATTACATAAAGAATTGTTTTAATGAGCAAAAGCTTTCACAACTGTATTTAGCGGTTAATAAAATTGGTCTCGAGATGACATTGAGCGATTCTGATAGTGATGACGATGAACAAACCTACAAATATCAAGAAATCCCTTCGAAAACTTACGTATGTGAGCTGTGTAATGTCAAGTTTCCACGTCGACAAGCAATTATTCAGCATCAATATTCTGAGCATGATTCGAAAGACAACAATTTCCCTCATAAATGTGTCAAGTGTGAAGATCAATTTGTATCTGCAGCCCTTTTGGAGCGTCATTTCAAAAGTGAATGTCAAAATGAATCAAGAACTAATGCTTGCATAAAATGTGGCATCAAGTTCATTTGGAAAGAAAATTTAGTCGCTCATACTTGTTTCAAAGAGGAGAAGAGTCCCGAAGAAAATAAACAATGTGAAGTTTGTGGCAAGAAGTTTATTTGGCTCAAAGATTTGCACAGACACAAACGAAGTCACATACCTTATGAGAAGAAATTCGAGTGTCTGGTGTGTGCTAGAAAGTTTAACCGCAAAGACAACATGAGAGCTCATATGAAAGTTCACACAACCGAAAATCAAGTTAAGGATAAATCAAAGATATCGATTAAGTGGGAGCAACAAGACGAGAATCTATGCAAGCCCAATGGACAGAAAGTAATACAATGTAAGATCTGCTTGTCAAAACATAATACAATAAAAGATCTAACAACTCATTTGATGAGCCACAAAGATCCTGCCACGTTCAAGCAACGAGAAGCGGAGGCAAGAGAGATTTCAATGATGATATATGGCAAGCAAATGGAAATGCAAACTTTGGAAAGAGCAATTTGCAAAGATCTTGAGAAAGGCAGCAATACACGTTTCTATTCAATCACCAATGAAGCTGGCTATGAGCTGAATTTAAATGATTCAGAAACCTGTTCCGATTTCGATGCAGACGATGATGATGATGATGACGATGATGATGAAATTTTAAGAAGCCGCAAAAAGGTCCTCAAAGGATACAACTGCCAAATATGTAGTCAAAACTTTAATAGGAAATTCAAAATATTCGAACATCAAAGAACAGAACATCAATGGGAGGAATTGCCCTACGAATGCCATCGTTGTGGTTCCAAATATGTGTGTGAAAGAATTTATCAATTACATTTGCAAAATGATTGCGAGAATAATGAGAAACAATTCAAATGCAAAACTTGCCCCATGAAATTCGCTTGGAAGGAGAACCTCAAGAATCATGAAAAGTATATGCATGATCAGAATCCAGCAATGCCAAAGAAACATCATTGCGATATTTGTGGTAAGAGTTTCCTTTGGGTAAAGGATTTAACGCGCCATCAGAAGACACATCAAACAGAAGATGAGAAATTCGAATGTACTTGGTGCTTTAGAGTTTTTATGCGAAGGGATAATCTAAAGGTTCATATGAAAGTACACCAGAACGCAACACACATCCTATTGCCAGACATTTACTATCTTGCCCGACCCAATGGCGCAAAACTTGCCCAATGCAAACTTTGTGATCAGCAATATTCAAACATTTCTGAGTTAGCTGAGCACATACAAAATGGACACATTAAACTACAGATGCTCAGCATCACACCCAATCCAGCTAGCTATTCAATTACAAACGCGTTAGGCTATGAGATGGACATAAACGATTCCGAAACCGAGCGCGAGGGTGAAGACGAGAAATACGTTTGTGATATTTGTGATGCCCGGTATAATCGTCGCTTTAAATTACTCCAACATCAGCAATCGCTTCATTACTCTGACAACATTCCGCACAAGTGTATCGATTGCAGTTTCAAATGCGTCTCAGAGCTAGTGCTCAATTATCACATGCGAACGCAGTGCATGAATCTTGTTAAGCAGTTCCGCTGCAGCAAATGCACTATGCGTTTCATGTGGAAGGAAAATCTGGAAAATCATGAAAGCTTAATACACGATGGTAAGCGAAAACATACTTGTACTGTTTGCAAAAAAGATTTCGCCACACAACTGGACCTGAGAAACCACACCGAATGCAAAGCCCCGGCGGAGGAGAAACTCTTCAAATGTGACTTGTGCGATCGTAAATACAATCGAAAAGATCGACTTATGAAACACGCAAAGGTTCATACTGCCGGCGGCAAAGAAACAAAAGCCAAACGCATTAAGACCGAAGCAGCAGACAAGAAATTTTtgtgtgcattctgtggcaaggaagtgtcgagttcatcgaatctcgttattcacatgagacggcacacgggtgagaaaccgttcaagtgcgaattctgtaataagggcttccccagatcgtcagatttggcttgccacagaagaacacacactggagaacgaccacacaagtgcacggtgtgtgaaaaggcattctcccgctcgtacaaacttcaaacccacatgcgaattcattcgggcgagaggccgtacaagtgcacttattgtgagaagagctttactcaatctaatgatttgacacttcatgtacgacggcacacgggtgaaagaccctatgtgtgtgagacttgtggtgaaagatttatacaaggaacagcacttaaaaaccatcgaagaatgcgtgggcattacgaAATTTAA
Protein Sequence: MTQISHFYIRHKKSKKPLKTRSQRTNMSTRSKTIKTKLKSGRFECDHCSKTFAWKKDLFRHEKSHEPNTKKFACPHCDRRFIRKDKLQSHVLVHLGGIVKPRCSKATLAFSRQLYSEEKFKEIVCMICNYDKSGNMKELIRHISLHDMQNVEGFENSECVKRFYADKDLQEVMMLIGNQIEQKEFGKLHSSVNANGCEMGISDSDESDPETSYTCEICTEAFNRKHKLIAHSLSGHTVDECLYKCEKCKLEFTSKEVFDSHQKHHCNNADKEFHCENCPARFAWPQNLANHKCHKDNDSSKDKTVCEPCGEVFATQKAFRLHKKTKCGTVKLDQESTTCEICNKVFSFPRDLRKHKKIHIPDGKSHDCSICGEKFLRSDNLRNHLKSHTSKVERPLLPKKLVCMLCGDKFTTIGSLRYHLFNHSDGQSEIDFENSGFVLNFYPGVGKEVVSDYIKNCFNEQKLSQLYLAVNKIGLEMTLSDSDSDDDEQTYKYQEIPSKTYVCELCNVKFPRRQAIIQHQYSEHDSKDNNFPHKCVKCEDQFVSAALLERHFKSECQNESRTNACIKCGIKFIWKENLVAHTCFKEEKSPEENKQCEVCGKKFIWLKDLHRHKRSHIPYEKKFECLVCARKFNRKDNMRAHMKVHTTENQVKDKSKISIKWEQQDENLCKPNGQKVIQCKICLSKHNTIKDLTTHLMSHKDPATFKQREAEAREISMMIYGKQMEMQTLERAICKDLEKGSNTRFYSITNEAGYELNLNDSETCSDFDADDDDDDDDDDEILRSRKKVLKGYNCQICSQNFNRKFKIFEHQRTEHQWEELPYECHRCGSKYVCERIYQLHLQNDCENNEKQFKCKTCPMKFAWKENLKNHEKYMHDQNPAMPKKHHCDICGKSFLWVKDLTRHQKTHQTEDEKFECTWCFRVFMRRDNLKVHMKVHQNATHILLPDIYYLARPNGAKLAQCKLCDQQYSNISELAEHIQNGHIKLQMLSITPNPASYSITNALGYEMDINDSETEREGEDEKYVCDICDARYNRRFKLLQHQQSLHYSDNIPHKCIDCSFKCVSELVLNYHMRTQCMNLVKQFRCSKCTMRFMWKENLENHESLIHDGKRKHTCTVCKKDFATQLDLRNHTECKAPAEEKLFKCDLCDRKYNRKDRLMKHAKVHTAGGKETKAKRIKTEAADKKFLCAFCGKEVSSSSNLVIHMRRHTGEKPFKCEFCNKGFPRSSDLACHRRTHTGERPHKCTVCEKAFSRSYKLQTHMRIHSGERPYKCTYCEKSFTQSNDLTLHVRRHTGERPYVCETCGERFIQGTALKNHRRMRGHYEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00665902; iTF_00188385; iTF_00664263; iTF_00694865; iTF_00665045; iTF_01318422; iTF_00974967; iTF_00427483; iTF_00894175; iTF_00426553; iTF_00335283; iTF_00976728; iTF_01357243; iTF_01212189;
90% Identity: iTF_00664263;
80% Identity: -