Belo042063.1
Basic Information
- Insect
- Baccha elongata
- Gene Symbol
- -
- Assembly
- GCA_951217065.1
- Location
- OX578273.1:15008299-15017470[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.0001 0.022 16.8 1.9 1 23 114 136 114 136 0.98 2 29 4.2e-06 0.00088 21.2 2.0 1 23 143 165 143 165 0.98 3 29 0.0015 0.32 13.2 1.5 1 19 284 302 284 303 0.97 4 29 5.4 1.1e+03 2.0 4.3 1 23 314 336 314 336 0.91 5 29 0.65 1.4e+02 4.9 1.2 1 21 344 364 344 365 0.93 6 29 0.0069 1.5 11.1 0.2 2 22 378 398 378 398 0.94 7 29 0.00011 0.024 16.7 2.2 2 23 411 432 410 432 0.97 8 29 0.00027 0.056 15.6 1.7 1 23 439 461 439 461 0.96 9 29 0.26 55 6.1 0.3 3 23 476 496 474 496 0.93 10 29 0.043 9.1 8.6 0.5 1 23 574 597 574 597 0.95 11 29 1.5 3.2e+02 3.7 0.6 1 21 605 625 605 626 0.93 12 29 3.4 7.2e+02 2.6 0.2 3 19 637 653 636 655 0.92 13 29 0.0043 0.9 11.8 2.7 2 23 668 689 667 689 0.98 14 29 8.5e-06 0.0018 20.3 0.8 1 23 696 718 696 718 0.98 15 29 0.005 1.1 11.5 3.2 1 23 864 887 864 887 0.98 16 29 5.4 1.1e+03 2.0 0.4 1 10 894 903 894 904 0.91 17 29 0.0015 0.32 13.2 1.0 1 23 924 947 924 947 0.96 18 29 0.7 1.5e+02 4.8 4.1 1 23 957 979 957 979 0.94 19 29 1.1e-05 0.0022 19.9 1.0 1 23 986 1008 986 1008 0.98 20 29 0.0003 0.064 15.4 0.3 2 23 1032 1054 1032 1054 0.97 21 29 0.0013 0.27 13.4 0.9 1 23 1095 1118 1095 1118 0.97 22 29 0.1 22 7.4 0.7 1 23 1155 1178 1155 1178 0.91 23 29 0.00059 0.12 14.5 2.0 1 20 1184 1203 1184 1204 0.95 24 29 0.00012 0.024 16.7 1.9 1 23 1214 1236 1214 1236 0.98 25 29 1.7e-05 0.0037 19.3 0.3 2 23 1259 1280 1258 1280 0.95 26 29 0.00027 0.056 15.6 3.3 1 23 1286 1308 1286 1308 0.99 27 29 7.7e-07 0.00016 23.5 3.4 1 23 1314 1336 1314 1336 0.98 28 29 6.5e-07 0.00014 23.8 2.4 1 23 1342 1364 1342 1364 0.99 29 29 0.00027 0.057 15.5 0.2 1 23 1370 1394 1370 1394 0.93
Sequence Information
- Coding Sequence
- ATGGCTGGTAAAATACGATCAACTAGTGCTAGTCGTATGAGAAAATTTCGTGAAAAGAAAAAGGCCGAAGATCCAGATTATAAAGCCAAAGAATCCAGGAGAATCTGTGAATTGCGTAAGAGAAAACGGAATCAACTTTCTGAATCGGAATTGGCAGCCGTACGACGTAAGCAAAGAGATGAAAAAAGATTACAAAGGGCTAAAAATCGGATAACAGTTTCTACAAGTATTAATAGACCTTCTGGTTCTGCATCTTCTaaatCCTTGAAATCTCGCAGCCAACGTTCCAGCATAAGTACACGtagcaaaaaaaagaaacaaaagacGAAATCTGGTCGTTTCGAATGCGACTACTGTAATAAAACGTTTGCATGGAAAAAAGATTTATTCCGTCATGAGAAAACTCATGAAcctaacacaaaaaaattccaATGTCCACATTGTGAACGTCGATTTATACGAAAAGATAAACTTCAGTCGCATGTGATGGTGCATTTAGGTGGTATTGTCAAGTCACGTTGTTCAAAGGCCATTCTACTATTCTCACGTCAACTATACTCTGcagaaaaattcaaagaaatggTATGCATGATATGTAACTACGACAAATCGGTTAATATGAAAGAACTTCGCCAGCATATCAGTTTACATAGCCAATCTAGAGGTGAAGATTTGGCAAATAGCGAATGTGTTAAGAGGTTTTTCCCAGATAAGAACTTGGACGAAGTAAAGGCCCTAATAGCTTTGCAAATTGAAGAAAAACGATTTGGAAAACTACACTCTATTGTCAATGCAAATGGCTTTGAAATGGGTATTAGCGATTCGGATGAAAGTGATGAAGAAACTTTGTATACGTGTGAAATTTGCAGTGAGTCATTCAACCGAAAGCACAAGCTTCTATCACATTCGTTTTGTGGACACACTGCTGATGAGTGTTCATATAAGTGTGATAAATGTAAACTAGAATTTACTTGCAAAGAAGTTTTTGATAGTCACCTAAAACAGCACTGTTCCAATTTAGAAAAAGAGTTTCACTGTGAGAACTGTCCAGCACGGTTTGCATGGCCACAGAACCTTGCAAAACACAAAtgcaaaaacaaagaaaacacttCACTAAAGGGCGGCAACAACACTTGCGAAGCTTGCGGGGAAGTCTTCACAACTCTAAAAGAATTCCGTATTCATAAGAAGACAAAATGCGGCTCTGTTGATCTTATTAAAGAGAACACAACATGTGAAATTTGCGGCAAGGTATGTAATTTCCCTAGAGATTTGAGAAAACATAAAAAGATTCACATACCAGACGGTAAGTCCCATGATTGTTCTGTCTGTGGTGAGAGATTCCTCCGTTCGGAAAATCTCAGAAACCACTTGAAGTCGCACACTATAAAGGTTGAAAGGGCCCTTCTTGCTAAAAAACTAATTTGTATGCTTTGTGGTGATAAATTCACAACCATCGCCAGTTTAAGATACCACTTGTTTAATCATTCCGATGGCCACACGGacgttaaatttgaaaattccgGATTTGTTTTGAACTTTTACCCTGGCGTCGGCAAAGATGTTATTTCTGAGTACATTAGGAATTGTTTCAACGAACAAAAACTTTCTCAACTGTTTTTAGCTGTAAATAAAATCGGTCTTGAGATGACATTAAGTGATTCGGATAGTGAAGACGATGAACACACGTACAAGGATCCTGACGCTTCCTCGAAATCATACGTCTGTGAATTGTGTAACGTTAAGTTTCCTCGTCGTCAAACGATACTTTTGCATCAATACAAAGAGCATTCTAATGAGAAAAAATACCCGCATAAATGTGTAAAGTGTCAGGATCAATTTGTGTCAGTAGCGCTTTTAGAGCGTCACTTTAAAAGTGAATGCCAAAATGATGTTAGAAATAACCCTTGTGTCAGATGTGGcattaaatttgtttggaaGGAGAATTTGCTCGCTCATTCATGTTTCAGAGAAGAGGAGAAGAGTCCAGAAGACAACAAACAGTGTGAAGTTTGTGGCAAGAAGTTTATTTGGCTCAAGGACTTACATCGACATAAACGTAGTCACATTCCCTATGAGAAGAAATTCGAGTGTTTAGTGTGTGCTAAAAAATTCAACCGCAAAGACAATATGAGGGCTCACATGAAAGTTCACACCGCCGAAAACCAAATTAAGGATAAATCAAAATCATCGATAAAGTGGGAGCAACAAGATGAGAATTTATGCAAACCGAATGGCCACAAAGTAATTCAGTGTAAGATATGTTTGTCGAAGCATAATACCATCAAAGATTTAAGAACTCACTTGTCTAGCCATAAGGACCCTGCTACATTTAAACAAAGAGAAGCAGAAGCAAGAGAGATGTCCATGATGATATATGGGAAGCAAATGGAAATGCAAACACTGGAGAGAGCTATTTGCAAAGACCTTGAGAAGAACACTCATACTCGTTTTTACTCAATTACCAATGAATCAGGTTATGAGTTGAATTTAAATGATTCGGAAACTTGTTCAGATTTCGATGCagacgacgatgacgatgacgacgacgacgataatgatgaaaaaaaatccaaagaagtCAAAGGTTACAACTGCAAAATGTGTAGTCAAAACTTTAAtaggaaatttaaaatattcgaaCATCAAAGAACGGCACATCAATGGGAGGAATTGCCATACGAATGCAATCGATGCGGAGCTAAGTTTGTGTGCGAGAGAATTTATCAATTGCATTTACAAAACGATtgtgaaaataatgaaaaacaattcaaatgtAAGATTTGTCCTATGAAATTCGCttggaaagaaaatttaaaaaatcatgaGAAGTATATGCATGATCAGAATCCAGCAATGCCAAAGAAACATCATTGCTATACTTGTGGAAAGAGTTTCCTTTGGGTTAAGGACTTAGCACGGCATCAAAAGACCCATCAAACAGAAGATGAGAAATTCGAGTGCACTTGGTGTTTCAGAATCTTTATGCGGAGAGATAATCTTAAGGTTCATATGAAAGTTCATCAAAATGCCACACACATCCTGTTGCCGGATATTTACTATCTAGCCCGTCCCAATGGCACAAAAGTTGCCCAATGCAAGCTTTGCGATCAGAAATACACAAACATCTCTGACTTAGCTGAACACATTCGAAATGAACATCTTAAATTGCAGATGCTCAGCATCACTCCCAACCCAGCCAGTTATTCAATAACAAATGCACTTGGTTATGAAATGGATATCAATGATTCTGAAACAGAACGCGAGGGTGAAGATGATAAATATGTTTGTGAGCTTTGTGATGCTCGTTATAATCGCCGCTTTAAATTGTTGCAACATCAGCAATCGCTACATTACTCCGACCACATTCCACACAAATGTATTGAATGCAGTTTTAAATGCGTCTCAGAACTGGTTCTCAATTATCACATGCGAACACAATGCATGAATTTGGCCAAAGAATTCCGTTGCAGCAAATGCACTATGCGCTTTATGTGGAAGGAGAATCTAGAGAATCATGAAAGCTTAATACACGATGGCAAGAGAAAACACACTTGTACTGTTTGCAAAAAAGATTTCGCAACACAGCATGACCTAAGGAACCACACTGATTGTAAAGCCCCGGCAGAGGAAAAGCTGTTCAAATGTGATTTGTGCGATCGGAAATACAATCGAAAAGATCGGCTAATGAAGCATGCTAAGGTTCACACTGCCGGATTTAAAGAGCCGAAAGCAAAACGTATTAAAGCTGAAACAGCGGCGGACAAGAAATTCTTGTGTGCATTCTGTGGAAAGGAAGTGTCAAGTTCATCTAATCTTGTCATACACATGAGAAGACATACGGGTGAGAAACCGTTCAAATGCGAGTTCTGTAATAAGGGCTTTCCAAGATCTTCTGATTTGGCATGCCATAGACGAACGCACACTGGCGAGCGACCACACAAGTGCACAGTGTGTGAGAAAGCATTCTCGCGTTCATATAAACTTCAGACTCATATGCGCATTCATTCGGGTGAGAGACCGTACAAGTGCACTTATTGTGAAAAAAGCTTTACACAATCCAATGATTTAACTCTTCATGTGCGTCGGCATACTGGTGAAAGACCCTACGTGTGTGAAACATGTGGCGAGAGATTTATACAAGGAACGGCGCTAAAAAATCATCGTCGAATGCGGGGACATTATGAGATTTAA
- Protein Sequence
- MAGKIRSTSASRMRKFREKKKAEDPDYKAKESRRICELRKRKRNQLSESELAAVRRKQRDEKRLQRAKNRITVSTSINRPSGSASSKSLKSRSQRSSISTRSKKKKQKTKSGRFECDYCNKTFAWKKDLFRHEKTHEPNTKKFQCPHCERRFIRKDKLQSHVMVHLGGIVKSRCSKAILLFSRQLYSAEKFKEMVCMICNYDKSVNMKELRQHISLHSQSRGEDLANSECVKRFFPDKNLDEVKALIALQIEEKRFGKLHSIVNANGFEMGISDSDESDEETLYTCEICSESFNRKHKLLSHSFCGHTADECSYKCDKCKLEFTCKEVFDSHLKQHCSNLEKEFHCENCPARFAWPQNLAKHKCKNKENTSLKGGNNTCEACGEVFTTLKEFRIHKKTKCGSVDLIKENTTCEICGKVCNFPRDLRKHKKIHIPDGKSHDCSVCGERFLRSENLRNHLKSHTIKVERALLAKKLICMLCGDKFTTIASLRYHLFNHSDGHTDVKFENSGFVLNFYPGVGKDVISEYIRNCFNEQKLSQLFLAVNKIGLEMTLSDSDSEDDEHTYKDPDASSKSYVCELCNVKFPRRQTILLHQYKEHSNEKKYPHKCVKCQDQFVSVALLERHFKSECQNDVRNNPCVRCGIKFVWKENLLAHSCFREEEKSPEDNKQCEVCGKKFIWLKDLHRHKRSHIPYEKKFECLVCAKKFNRKDNMRAHMKVHTAENQIKDKSKSSIKWEQQDENLCKPNGHKVIQCKICLSKHNTIKDLRTHLSSHKDPATFKQREAEAREMSMMIYGKQMEMQTLERAICKDLEKNTHTRFYSITNESGYELNLNDSETCSDFDADDDDDDDDDDNDEKKSKEVKGYNCKMCSQNFNRKFKIFEHQRTAHQWEELPYECNRCGAKFVCERIYQLHLQNDCENNEKQFKCKICPMKFAWKENLKNHEKYMHDQNPAMPKKHHCYTCGKSFLWVKDLARHQKTHQTEDEKFECTWCFRIFMRRDNLKVHMKVHQNATHILLPDIYYLARPNGTKVAQCKLCDQKYTNISDLAEHIRNEHLKLQMLSITPNPASYSITNALGYEMDINDSETEREGEDDKYVCELCDARYNRRFKLLQHQQSLHYSDHIPHKCIECSFKCVSELVLNYHMRTQCMNLAKEFRCSKCTMRFMWKENLENHESLIHDGKRKHTCTVCKKDFATQHDLRNHTDCKAPAEEKLFKCDLCDRKYNRKDRLMKHAKVHTAGFKEPKAKRIKAETAADKKFLCAFCGKEVSSSSNLVIHMRRHTGEKPFKCEFCNKGFPRSSDLACHRRTHTGERPHKCTVCEKAFSRSYKLQTHMRIHSGERPYKCTYCEKSFTQSNDLTLHVRRHTGERPYVCETCGERFIQGTALKNHRRMRGHYEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00984436;
- 90% Identity
- -
- 80% Identity
- -