Basic Information

Insect: Leucozona laternaria
Gene Symbol: -
Assembly: GCA_932273905.1
Location: CAKNZR010000431.1:316381-324110[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.00012 0.022 16.5 2.5 1 23 228 250 228 250 0.98

2 28 5.1e-06 0.00092 20.8 1.2 1 23 257 279 257 279 0.97

3 28 0.00023 0.041 15.6 2.1 1 23 398 421 398 421 0.91

4 28 9.3 1.7e+03 1.2 6.7 1 23 428 450 428 450 0.96

5 28 0.24 43 6.1 0.3 1 20 458 477 458 479 0.93

6 28 0.085 15 7.6 0.1 3 22 491 510 490 510 0.90

7 28 7.5e-06 0.0013 20.3 1.2 2 23 523 544 522 544 0.97

8 28 0.00021 0.037 15.8 1.8 1 23 551 573 551 573 0.96

9 28 0.37 67 5.6 0.7 3 23 588 608 587 608 0.95

10 28 0.02 3.7 9.5 0.7 1 23 686 709 686 709 0.96

11 28 3.8 6.9e+02 2.4 0.4 1 21 718 738 718 739 0.92

12 28 0.85 1.5e+02 4.4 0.2 3 20 750 767 749 769 0.93

13 28 0.0043 0.77 11.6 2.7 2 23 780 801 779 801 0.98

14 28 2e-05 0.0035 19.0 0.7 1 23 808 830 808 830 0.98

15 28 0.0036 0.64 11.9 2.7 1 23 978 1001 978 1001 0.98

16 28 0.0054 0.97 11.3 1.5 1 23 1038 1061 1038 1061 0.96

17 28 0.03 5.4 9.0 3.6 1 23 1071 1093 1071 1093 0.96

18 28 3.7e-06 0.00067 21.3 1.0 1 23 1100 1122 1100 1122 0.98

19 28 0.0018 0.33 12.8 0.1 2 23 1146 1168 1146 1168 0.96

20 28 0.00042 0.075 14.8 0.7 1 23 1209 1232 1209 1232 0.97

21 28 0.1 18 7.3 0.7 1 23 1269 1292 1269 1292 0.91

22 28 0.00052 0.092 14.5 1.9 1 20 1298 1317 1298 1318 0.95

23 28 0.00011 0.02 16.6 1.8 1 23 1328 1350 1328 1350 0.98

24 28 1.8e-05 0.0032 19.2 0.3 2 23 1372 1393 1371 1393 0.95

25 28 0.00027 0.048 15.4 3.3 1 23 1399 1421 1399 1421 0.99

26 28 7.8e-07 0.00014 23.4 3.4 1 23 1427 1449 1427 1449 0.98

27 28 6.6e-07 0.00012 23.6 2.4 1 23 1455 1477 1455 1477 0.99

28 28 0.00028 0.049 15.4 0.2 1 23 1483 1507 1483 1507 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.00012	0.022	16.5	2.5	1	23	228	250	228	250	0.98
2	28	5.1e-06	0.00092	20.8	1.2	1	23	257	279	257	279	0.97
3	28	0.00023	0.041	15.6	2.1	1	23	398	421	398	421	0.91
4	28	9.3	1.7e+03	1.2	6.7	1	23	428	450	428	450	0.96
5	28	0.24	43	6.1	0.3	1	20	458	477	458	479	0.93
6	28	0.085	15	7.6	0.1	3	22	491	510	490	510	0.90
7	28	7.5e-06	0.0013	20.3	1.2	2	23	523	544	522	544	0.97
8	28	0.00021	0.037	15.8	1.8	1	23	551	573	551	573	0.96
9	28	0.37	67	5.6	0.7	3	23	588	608	587	608	0.95
10	28	0.02	3.7	9.5	0.7	1	23	686	709	686	709	0.96
11	28	3.8	6.9e+02	2.4	0.4	1	21	718	738	718	739	0.92
12	28	0.85	1.5e+02	4.4	0.2	3	20	750	767	749	769	0.93
13	28	0.0043	0.77	11.6	2.7	2	23	780	801	779	801	0.98
14	28	2e-05	0.0035	19.0	0.7	1	23	808	830	808	830	0.98
15	28	0.0036	0.64	11.9	2.7	1	23	978	1001	978	1001	0.98
16	28	0.0054	0.97	11.3	1.5	1	23	1038	1061	1038	1061	0.96
17	28	0.03	5.4	9.0	3.6	1	23	1071	1093	1071	1093	0.96
18	28	3.7e-06	0.00067	21.3	1.0	1	23	1100	1122	1100	1122	0.98
19	28	0.0018	0.33	12.8	0.1	2	23	1146	1168	1146	1168	0.96
20	28	0.00042	0.075	14.8	0.7	1	23	1209	1232	1209	1232	0.97
21	28	0.1	18	7.3	0.7	1	23	1269	1292	1269	1292	0.91
22	28	0.00052	0.092	14.5	1.9	1	20	1298	1317	1298	1318	0.95
23	28	0.00011	0.02	16.6	1.8	1	23	1328	1350	1328	1350	0.98
24	28	1.8e-05	0.0032	19.2	0.3	2	23	1372	1393	1371	1393	0.95
25	28	0.00027	0.048	15.4	3.3	1	23	1399	1421	1399	1421	0.99
26	28	7.8e-07	0.00014	23.4	3.4	1	23	1427	1449	1427	1449	0.98
27	28	6.6e-07	0.00012	23.6	2.4	1	23	1455	1477	1455	1477	0.99
28	28	0.00028	0.049	15.4	0.2	1	23	1483	1507	1483	1507	0.93

Sequence Information

Coding Sequence: ATGGCTCGTATCTACGAAAGGAAAACGGAAAGGAAATTAATGACCCAAAAACAACTCGATGAGGCTAGGGAGCTAATTAAAAATGGAAGTAGCCAGCGGAAGGCTGCCAAAACAATCGGTGTGAAACCAAGCACACTAAGAAAGAGACTTTCATTGGGAAGTGTTAGTACTTCTCTTGGTCGTTTCAAAATGACCTTTACCGACAATCAGGAAAATGAACTCGTAGAGCATTACAAGGTCATGGACAGCCTCTTTTATGGCATGACTATGGCTAATTTGAGACGCCTAGTTTTTGAATTCGCTGAAGCAAATAAAATTCCCAATAGATTCGATGAAAAATTGAAAATGGCTGGTCGTGACTGGGTCGAAAGTTTCCTCAGTCGCCATAGTGAGTTGTGCATTCGCCATTCACAACCAAAAAGCCTTGCTAAAGCAATTTGCTTCAATAAAATGCAAGTGCAAATATTCTATAAGAATTTAAAAGACCTCTACGAGAAGTATCAATTCCAGTCTAGCCGTGTTTATAATATGGACGAAAGCGCAATACGCATATCTATTCGAGGTAACAAAGTAGTGGATAAGgttgtTAAAAAGTCAAAAAAAGCGCTCAAGACTAGAAGCCAACGCACCAACATGAGTACCCGAAGCAAAACAAAAAAAACCAAATCAAAGTGTGGTCGTTTTGAGTGTGACCATTGTGGTAAAACTTTTGCATGGAAAAAAGATCTATTTCGTCATGAAAAATCCCATGAACCTAACACAAAGAAATTTGCGTGTCCACATTGTGATCGTCGATTTATACGAAAGGATAAGCTTCAATCACACGTGCTAGTTCATTTAGGTGGTATTGTAAAACCTCGTTGTTCAAAGGCCACTCTAGCATTCTCACGACAATTGTATTCTCAAGAAAAATTCAAAGAATTGATCTGTATGATTTGTAATTACGACAAAGCGGTTAATATAAAAGAGCTCTGTCGGCATATCACTTTACACGACATGCAACAATTAGAATGTTTCGAGAATAGTGAATGTGTGAAGAGGTTTTACGCTGGCAAGGACTTGCAAGACGTCATGTTGCTGATATCTAATCAAATTGAACAGAAAGAGCTGGGAAAATTACATTCCATCGTCAATGCAAATGGCTTCGAGATGGGTATCAGTGATTCGGATGAGAGCGATGTAGAAACTTTATACACATGTGAAATTTGCAATGAGACATTCAACCGAAAGCACAAGCTTTTAGCACATTCATTTTCTGGACATACTGTTGACGAGTGTTTATATAAATGCGAGAAATGTAAACTGGAATTTACCTGCAAAGAAGTTTTTGTTAGCCACCAGAAACACCATTGTAACAATGTCGACAAAGAGTTCCAATGTGAGAACTGTCCAGCTAGATTCGCTTGGCCTCAAAATCTGGCGAATCACAAATGTAACAAAGAAAACGAGTCTTCTAAGGACAAAACCCTGTGCGAACCTTGCGGAGAAGTTTTCGCCACGCAAAAGGCTTTCCGTCTTCATAAGAAGACAAAATGTGGTACAGTAGAGCTTGACAAAGAGAGCACAACCTGTGAAATTTGCAATAAAGTCTTTAGTTTCCCAAGAGATTTGAGAAAACATAAAAAAATTCATATACCGGATGGTAAGTCTCACGATTGTTCTGTATGCGGCGAAAAATTCCTTCGTTCGGACAATCTCCGAAACCATTTGAAGTCGCACACCAGTAAGTTTGAGAGGCCACTGGTAGCTAAGAAATTATTGTGTATGCTCTGTGGCGATAGATTCACAACCATGGGTAGCTTAAGATACCATTTGTTTAACCATTCCGATGGTCAATCTGAAATTGACTTTGATAATTCCGGTTTCGTTTTAAACTTTTATCCTGGCGTCGGGAAAGAAGTTGTTTCGGAGTACATAAAGAATTGTTTTAATGAGCAAAAACTTTCGCAACTGTATTTAGCGGTTAATAAAATCGGTCTTGAGATGACATTGAGTGATTCTGATAGTGATGACGATGAACAAACTTACAAACATCAAGAAACTCCTTCGAAAACGTACGTATGCGAGCTGTGTAATGTAAAGTTTCCCCGTCGACAAGCTATTCTTCAGCATCAACATTCTGAACATGATTCGAAAGAGAATAATTTCCCTCATAAATGTGTGAAGTGTGAAGATCAATTTGTTTCTGGAGCCCTTTTGGAGCGTCATTTCAAAAGTGAATGTCAAAATGATGCCAGAACTAATGCTTGCGTCAAATGTGGCATTAAATTCATTTGGAAGGAAAATTTAGTCGCTCATACTTGTTTTAAAGAGGAGAAGAGTCCGGAAGAGAATAAACAATGTGAAGTTTGTGGTAAGAAGTTTATATGGCTGAAAGATTTGCATCGACATAAACGAAGTCACATACCGTATGAGAAAAAATTCGAGTGTCTTGTGTGTGCTAGAAAATTCAACCGCAAGGACAACATGAGAGCTCATATGAAAGTTCACACCACCGAAAATCAAGTTAAGGAAAAAGCAAAGATATCCATTAAGTGGGAGCAACAGGATGAAAATCTATGTAAACCAAATGGACAGAAAGTTATTCAGTGTAAGATCTGTTTGTCAAAGCATAACACAATCAAAGATTTAACAACTCATTTGATGAGCCACAAAGACCCTGCAACCTTCAAACAAAGAGAGGCAGAAGCAAGAGAGATTTCAATGATGATATATGGCAAGCAAATGGAGATGCAAACTCTGGAAAGAGCAATTTGCAAAGATCTTGAGAAAGGCAGCAATACGCGTTTCTATTCAATCACTAACGAAGCCGGTTATGAGCTAAATTTAAATGATTCCGAAACTTGTTCAGACTTTGATGCCGACGATGACGATGACGACGATGACGATGATGATGAAGTGTTAAAAGATCGGAAACGTGTCCTCAAAGGATATAACTGCCAAATATGTAGTCAAAACTTTAATAGGAAATTCAAAATATTCGAACATCAAAGAACAGAACATCAATGGGAGGAACTGCCATACGAGTGCAATCGATGTGGTTCTAAGTATGTGTGTGAGAGAATTTATCAACTCCATTTGCAAAATGATTGTGAGAATAATGAGAAACAATTCAAATGTAAAACTTGTCCAATGAAATTCGCTTGGAAAGAAAATCTAAAAAATCATGAGAAGTATATGCATGATCAAAATCCAGCTATGCCAAAGAAACATCATTGCGATATTTGTGGAAAGAGTTTCCTTTGGGTAAAGGATTTAACGCGCCATCAGAAGACACATCAAACGGAAGATGAGAAATTCGAATGCACTTGGTGCTTCAGAGTCTTCATGCGAAGGGATAATCTTAAGGTTCATATGAAAGTGCACCAGAACGCTACACATATCCTGTTGCCAGATATCTACTACCTTGCCCGACCCAATGGCTCAAAAGTTGCCCAATGCAAACTTTGTGATCAGCAATATTCAAATATCTCTGATTTAGCAGAGCACATTCAAAATGGACATATTAAATTACAGATGATCAACATCACTCCCAACCCAGCCAGCTATTCAATAACAAACGCTTTAGGCTATGAGATGGATATAAATGATTCCGAAACAGAGCGCGAAGGTGATGATGAGAAGTACGTTTGTGACATTTGTGACGCTCGATATAACCGTCGCTTCAAATTGCTGCAACATCAGCAATCGTTACATTACTCTGACAACATTCCTCACAAGTGTATCGATTGCAGTTTCAAATGCGTCTCAGAGCTAGTGCTCAATTATCACATGCGAACGCAGTGTATGAATCTTGTTAAGCAGTTCCGCTGCAGCAAGTGCACTATGCGTTTTATGTGGAAAGAGAATCTCGAGAATCATGAGAGCTTAATACACGACGGTAAGCGAAAACACACTTGTACCGTTTGCAAAAAAGATTTTGCGACACAGCACGACCTGAGGAATCACACCGAATGTAAAGCCCCGGCAGATGAAAAACTCTTCAAATGTGAACTGTGTGATCGTAAATACAATCGAAAAGATCGGCTCATGAAACATGCAAAGGTTCACACTGCCGGAGGAAAAGAAACTAAAGCAAAACGCATTAAAACCGaagcatcagacaagaaattcttatgtgcattttgtggcaaagaagtgtcaagttcatccaatctcgtcatacatatgagacggcatacgggtgagaaaccgttcaagtgtgagttctgtaataagggattccctagatcttcagatttggcttgtcatagacgaacgcacactggagaacgaccacataagtgcactgtgtgtgaaaaggcgttctcccgctcgtacaaacttcagactcatatgcgaattcattctggcgagaggccttataagtgtacttactgtgagaaaagctttacacaatccaatgatttgacacttcatgtacgtcggcatacaggtgaaagaccttatgtgtgcgaaacatgtggcgaaagatttatacaaggaactgcacttaaaaaccatcgaagaatgcgtGGGCATTATGAAATTTAA
Protein Sequence: MARIYERKTERKLMTQKQLDEARELIKNGSSQRKAAKTIGVKPSTLRKRLSLGSVSTSLGRFKMTFTDNQENELVEHYKVMDSLFYGMTMANLRRLVFEFAEANKIPNRFDEKLKMAGRDWVESFLSRHSELCIRHSQPKSLAKAICFNKMQVQIFYKNLKDLYEKYQFQSSRVYNMDESAIRISIRGNKVVDKVVKKSKKALKTRSQRTNMSTRSKTKKTKSKCGRFECDHCGKTFAWKKDLFRHEKSHEPNTKKFACPHCDRRFIRKDKLQSHVLVHLGGIVKPRCSKATLAFSRQLYSQEKFKELICMICNYDKAVNIKELCRHITLHDMQQLECFENSECVKRFYAGKDLQDVMLLISNQIEQKELGKLHSIVNANGFEMGISDSDESDVETLYTCEICNETFNRKHKLLAHSFSGHTVDECLYKCEKCKLEFTCKEVFVSHQKHHCNNVDKEFQCENCPARFAWPQNLANHKCNKENESSKDKTLCEPCGEVFATQKAFRLHKKTKCGTVELDKESTTCEICNKVFSFPRDLRKHKKIHIPDGKSHDCSVCGEKFLRSDNLRNHLKSHTSKFERPLVAKKLLCMLCGDRFTTMGSLRYHLFNHSDGQSEIDFDNSGFVLNFYPGVGKEVVSEYIKNCFNEQKLSQLYLAVNKIGLEMTLSDSDSDDDEQTYKHQETPSKTYVCELCNVKFPRRQAILQHQHSEHDSKENNFPHKCVKCEDQFVSGALLERHFKSECQNDARTNACVKCGIKFIWKENLVAHTCFKEEKSPEENKQCEVCGKKFIWLKDLHRHKRSHIPYEKKFECLVCARKFNRKDNMRAHMKVHTTENQVKEKAKISIKWEQQDENLCKPNGQKVIQCKICLSKHNTIKDLTTHLMSHKDPATFKQREAEAREISMMIYGKQMEMQTLERAICKDLEKGSNTRFYSITNEAGYELNLNDSETCSDFDADDDDDDDDDDDEVLKDRKRVLKGYNCQICSQNFNRKFKIFEHQRTEHQWEELPYECNRCGSKYVCERIYQLHLQNDCENNEKQFKCKTCPMKFAWKENLKNHEKYMHDQNPAMPKKHHCDICGKSFLWVKDLTRHQKTHQTEDEKFECTWCFRVFMRRDNLKVHMKVHQNATHILLPDIYYLARPNGSKVAQCKLCDQQYSNISDLAEHIQNGHIKLQMINITPNPASYSITNALGYEMDINDSETEREGDDEKYVCDICDARYNRRFKLLQHQQSLHYSDNIPHKCIDCSFKCVSELVLNYHMRTQCMNLVKQFRCSKCTMRFMWKENLENHESLIHDGKRKHTCTVCKKDFATQHDLRNHTECKAPADEKLFKCELCDRKYNRKDRLMKHAKVHTAGGKETKAKRIKTEASDKKFLCAFCGKEVSSSSNLVIHMRRHTGEKPFKCEFCNKGFPRSSDLACHRRTHTGERPHKCTVCEKAFSRSYKLQTHMRIHSGERPYKCTYCEKSFTQSNDLTLHVRRHTGERPYVCETCGERFIQGTALKNHRRMRGHYEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00984436;
90% Identity: iTF_00664263;
80% Identity: -