Basic Information

Insect: Platycheirus rosarum
Gene Symbol: -
Assembly: GCA_963971375.1
Location: OZ020509.1:29477543-29482248[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 8.8e-05 0.02 16.9 1.9 1 23 31 53 31 53 0.98

2 26 1.6e-05 0.0036 19.2 1.3 1 23 60 82 60 82 0.98

3 26 0.00021 0.047 15.7 1.3 1 23 201 224 201 224 0.94

4 26 1.4 3e+02 3.7 2.7 1 21 261 281 261 282 0.92

5 26 0.0031 0.7 12.0 0.2 3 22 294 313 293 313 0.94

6 26 5.3e-06 0.0012 20.8 0.5 3 23 327 347 325 347 0.96

7 26 0.00017 0.038 16.0 1.8 1 23 354 376 354 376 0.96

8 26 0.066 15 7.9 0.6 3 23 390 410 388 410 0.93

9 26 0.088 20 7.5 0.1 1 23 488 511 488 511 0.94

10 26 0.085 19 7.5 0.4 1 21 517 537 517 538 0.94

11 26 0.0034 0.75 11.9 2.3 2 23 579 600 579 600 0.98

12 26 9.8e-06 0.0022 19.9 0.7 1 23 607 629 607 629 0.98

13 26 0.0017 0.38 12.9 2.1 1 23 782 805 782 805 0.98

14 26 0.0013 0.28 13.3 1.0 1 23 842 865 842 865 0.96

15 26 0.27 60 5.9 2.0 3 23 877 897 876 897 0.93

16 26 3.1e-06 0.00069 21.5 1.0 1 23 904 926 904 926 0.98

17 26 0.0018 0.41 12.8 0.1 2 23 950 972 950 972 0.96

18 26 0.0012 0.26 13.4 0.7 1 23 1013 1036 1013 1036 0.97

19 26 0.086 19 7.5 0.7 1 23 1073 1096 1073 1096 0.91

20 26 0.0016 0.35 13.0 2.2 1 19 1102 1120 1102 1122 0.96

21 26 9.7e-05 0.022 16.8 1.9 1 23 1132 1154 1132 1154 0.98

22 26 1.5e-05 0.0033 19.4 0.3 2 23 1177 1198 1176 1198 0.95

23 26 0.00022 0.05 15.6 3.3 1 23 1204 1226 1204 1226 0.99

24 26 7.3e-08 1.6e-05 26.6 3.1 1 23 1232 1254 1232 1254 0.98

25 26 5.5e-07 0.00012 23.9 2.4 1 23 1260 1282 1260 1282 0.99

26 26 0.00023 0.051 15.6 0.2 1 23 1288 1312 1288 1312 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	8.8e-05	0.02	16.9	1.9	1	23	31	53	31	53	0.98
2	26	1.6e-05	0.0036	19.2	1.3	1	23	60	82	60	82	0.98
3	26	0.00021	0.047	15.7	1.3	1	23	201	224	201	224	0.94
4	26	1.4	3e+02	3.7	2.7	1	21	261	281	261	282	0.92
5	26	0.0031	0.7	12.0	0.2	3	22	294	313	293	313	0.94
6	26	5.3e-06	0.0012	20.8	0.5	3	23	327	347	325	347	0.96
7	26	0.00017	0.038	16.0	1.8	1	23	354	376	354	376	0.96
8	26	0.066	15	7.9	0.6	3	23	390	410	388	410	0.93
9	26	0.088	20	7.5	0.1	1	23	488	511	488	511	0.94
10	26	0.085	19	7.5	0.4	1	21	517	537	517	538	0.94
11	26	0.0034	0.75	11.9	2.3	2	23	579	600	579	600	0.98
12	26	9.8e-06	0.0022	19.9	0.7	1	23	607	629	607	629	0.98
13	26	0.0017	0.38	12.9	2.1	1	23	782	805	782	805	0.98
14	26	0.0013	0.28	13.3	1.0	1	23	842	865	842	865	0.96
15	26	0.27	60	5.9	2.0	3	23	877	897	876	897	0.93
16	26	3.1e-06	0.00069	21.5	1.0	1	23	904	926	904	926	0.98
17	26	0.0018	0.41	12.8	0.1	2	23	950	972	950	972	0.96
18	26	0.0012	0.26	13.4	0.7	1	23	1013	1036	1013	1036	0.97
19	26	0.086	19	7.5	0.7	1	23	1073	1096	1073	1096	0.91
20	26	0.0016	0.35	13.0	2.2	1	19	1102	1120	1102	1122	0.96
21	26	9.7e-05	0.022	16.8	1.9	1	23	1132	1154	1132	1154	0.98
22	26	1.5e-05	0.0033	19.4	0.3	2	23	1177	1198	1176	1198	0.95
23	26	0.00022	0.05	15.6	3.3	1	23	1204	1226	1204	1226	0.99
24	26	7.3e-08	1.6e-05	26.6	3.1	1	23	1232	1254	1232	1254	0.98
25	26	5.5e-07	0.00012	23.9	2.4	1	23	1260	1282	1260	1282	0.99
26	26	0.00023	0.051	15.6	0.2	1	23	1288	1312	1288	1312	0.93

Sequence Information

Coding Sequence: atgttttttactttcagcaaaaaaactaaaaaaacactcaaatcTCGCAGCAAACGTTCCAGCATGAGTACACGAAGCCAAAAAGGCCGTTTCGAGTGCGACTACTGTAATAAAACCTTTGCATGGAAAAAAGATCTTTTTCGTCATGAAAAAACCCATGAGCCTAACACAAAGAAGTATTCCTGCCCACATTGTGACCGTCGATTTATACGAAAGGATAAACTTGATTCACACGTTCTTGTTCATTTAGGTGGTATTGTCAAACCACGTTGCTCTAAGGCCACTTTATTGTTCTCACGTCAATTGTATTCTCAAGAAAAATTCAAAGAGTTTATTTGCATGATTTGCAATTACGATAAAGCGCTTAATGTAGGAGAGCTTCGCCGGCATATCAGCTTACACAACCAGCAACTGCACGAAAATTTCGTCGATAGTGAATGTTTTAAGAGGTTTTATGCTGGCATGGACTTGGGGGAAGTCATGGCACTTGTCGCTAGCCAAATCGAAAACAAGCAATTTGGAAAATTTCATTCCGTTCTCAATGCAAATGGCCTCGAAATGGGTATCAGTGATTCAGATGAGAGTGATGAGGAAATCCCATACTTCTGTGAAGTCTGCAATGAGTCATTCAATCGAAAGCATAAGTTAATAGCACACTCGTTGTCCGCACACACGGCCGATGATTGTCCGTATAAATGCGATAAATGCAAACTGGAATTTACTTGCCACGAAGTATTTGATAGCCACAAAAAACACCACTGTTACAATGAGGAAAAAGAGTTCTGTTGTGAGAATTGTCCAGCTCGATTCACCTGGCCGCAAAATCTTTCAAATCATAAATGTAGCAAAGAAAACGATGCTCATAAAAACAGAAACGCTTGCCAAATTTGTGGAGAAACTTTCACAACCCTTAAAGAAATCCGCATTCATAAGAAGACAAAATGCGGCACCGTTGAGCTAGATACAGAGAGCACGATATGTGAAATTTGCGGCAAAGTCTTCAATTTCCCCAGAGATTTGAGAAAACATAAAAAGATTCACATACCAGATGGTAAGTCCCACGATTGTTCTGTATGCGGGGAGAAATTCCTTCGATCCGACAATCTCCGAAACCACTTAAAATCGCATACTGCAGTTGAGAGGCCCCTTCTGGCAAAGAAACTAATTTGTATGCTCTGTGGTGATAGATTTAAAACAATCAGTAGCTTAAGATACCATTTATTCAATCATGCCGATGGCCTGACAGAGATTGACTTTGAAAATTCCGGATTTGTTCTAAACTTCTACAAAGGTGTAAGTAAAGAAGTTATTTCGGAATACATAAAGAACTGTTTCAATGAGCAAAAGCTTTCTCAACTTTATTTAGCAGTAAATAGAACCGGTCTTGAGATGACATTAAGTGATTCTGACAGTGATGGCGATGAACAATCATACAAGGATCATGATGCTGCATCTAAAACTTACATCTGTGAGCTCTGCAATGTCAAATTTCCCCGCCTACAAGCCATCCTGCAGCATCAATATATCGAACATAAGATGAAGGGCCCGCACAAATGCGTCAAGTGCGATGATCAGTTTGTGTCTGCAGCCCTCTTGGAGCGTCATTTTAAAAGTGAATGTCAAAATGATCTAAGGACTAACAGCTGCATAAAATGTGGTATGAAATTCATTTGGAGAGAAAATTTGGTTGCTCACAATTGCTTCCAAGTAGAGAAAACACCGGAAGAAAAGAGGCAATGTGAAGTTTGTGGTAAGAAGTTTATTTGGTTGAAGGATTTGCATCGTCACAAAAGAAGCCACATACCTTATGAGAAAAAATTCGAGTGTTTAATATGCGCCAGGAAGTTTAACCGCAAGGATAACATGCGGGCTCACATGAAAATTCACAACACTGACACCCAAGTCAGGgacaaaggaaaaataaatattaaatgggATCAACAAGATGAGAATTTATGCAAGCCTAATggacaaaaaataattcagtgtaaaatttgtttgtccAAGCACAACACAATACGAGATTTAACAACCCACTTAATGTCCCATAAAGACCCTGCAACATTCAAACAAAGAGAAGCTGAGGCAAGAGAAATTTCAATGATGATCTATGGCAAACAAATGGAGATGCAAACTCTAGAAAGAGCAATTAGCAAGGATCTTGAAAAGGGTAGTCATACGCGGTTTTATTCAATAACCAACGAAGTAGGCTACGAGTTAAATTTGAATGACTCCGAAACCTGTTCAGATTTCGATGCGggctatgatgatgatgacgacgacgacgatgacgatgatgcTGAAAATAATGAAGTGAAAAACGTGAAACGTGTTCTTAAAGGGTACAACTGTGAAATATGTAGCCAaaatttcaataggaaatttAAGATATTTGAACATCAAAGAACAGAACATCCATGGGAAGAATTGCTGTACGAATGCTTCCGATGTGGGGCAAAGTTTGTGTGCGAAAGAATTTATCAAATGCATTTACTAAATGACTGTGAAAATAATGAGAAacaatttaaatgcaaaatttgTCCAATGAAGTTTGCATGGAAGGAAAACCTTAAGAATCATGAGAAGTATATGCATGATCAGAATCCAGCAATGCCAAAGAAAAATCATTGCGACACTTGTGGAAAGAGTTTCCTTTGGGTGAAAGATTTGGCACGACATCGAAAGACCCATCAAACGGACGTTGAGAAATTTGAGTGCACTTGGTGTTTCAGGGTGTTTATGCGAAGGGATAATCTTAAGgtTCATATGAAAGTGCATCAAAACGCCACCCACATCCTGTTGCCAGACATTTATTATCTGGCCCGTCCCAACGGCATAAAAGTTGCCCAATGCAAGCTTTGCGATCAGAATTATACAAGTATCTCTGAATTAGCTGAGCATATTCAAAATGGACACATTAAGTTACAGATGCTCAGCATTACCCCCAATCCGGCTAGTTATTCAATAACAAATGCACTTGGCTATGAGATGGATATAAATGATTCGGAAACAGAACGAGAGGGCGAGGATCAGAAATACGTTTGTGAGATTTGTGAAGCACGCTATAACCGTCGCTTCAAGTTGTTGCAGCATCAGCAGTCGCTACATTATTCTGACAACATTCCACATAAGTGTATCGATTGTAGTTTTAAATGTGTCTCAGAGCTGGTGCTCAACTATCATATGCGAACGCAGTGCATGAATTTGGTCAAGCAATTCCGATGTAGCAAATGCACTATGCGCTTTATGTGGAAGGAGAATCTTGAGAACCATGAAAGCTTAATTCATGACGGTAAGCGAAAACACACTTGTGACACTTGCAAAAAAGACTTCGCCACACAGCACGATCTGAGAAACCACTCAGAATGCAAAGCCCCAACAGAGGAGAAGCTTTTCAAGTGTGACTTGTGTGACCGTAAATACAATCGAAAAGATCGACTTATGAAACACGCAAAAGTACACACTAATGAAGGGAAAGAGGAAAAGCCAAAGCGCATAAAAGCCGAAACAGCGGCTGGCAAGAAATTTTTATGCGCATTCTGTGGAAAGGAAGTGTCAAGTTCATCAAATCTCGTCATACATATGAGACGGCATACGGGTGAGAAACCGTTCAAATGTGAGTTTTGTAATAAAGGCTTCCCTAGATCGTCCGATTTGGCCTGTCACAGACGAACGCATACCGGAGAGCGCCCACACAAGTGCACAGTGTGCGGGAAGGCGTTTTCACGTTCGTACAAACTTCAGACTCACATGCGAATTCATTCGGGTGAGAGGCCGTACAAGTGCACGTACTGTGAGAAAAGCTTTACACAATCCAATGATTTGACACTTCATGTACGTCGACATACGGGTGAAAGGCCGTACGTGTGTGAAACATGCGGTGAAAGATTTATACAAGGAACCGCCCTTAAAAATCATAGAAGAATGCGGGGTCATTATGAAATATAA
Protein Sequence: MFFTFSKKTKKTLKSRSKRSSMSTRSQKGRFECDYCNKTFAWKKDLFRHEKTHEPNTKKYSCPHCDRRFIRKDKLDSHVLVHLGGIVKPRCSKATLLFSRQLYSQEKFKEFICMICNYDKALNVGELRRHISLHNQQLHENFVDSECFKRFYAGMDLGEVMALVASQIENKQFGKFHSVLNANGLEMGISDSDESDEEIPYFCEVCNESFNRKHKLIAHSLSAHTADDCPYKCDKCKLEFTCHEVFDSHKKHHCYNEEKEFCCENCPARFTWPQNLSNHKCSKENDAHKNRNACQICGETFTTLKEIRIHKKTKCGTVELDTESTICEICGKVFNFPRDLRKHKKIHIPDGKSHDCSVCGEKFLRSDNLRNHLKSHTAVERPLLAKKLICMLCGDRFKTISSLRYHLFNHADGLTEIDFENSGFVLNFYKGVSKEVISEYIKNCFNEQKLSQLYLAVNRTGLEMTLSDSDSDGDEQSYKDHDAASKTYICELCNVKFPRLQAILQHQYIEHKMKGPHKCVKCDDQFVSAALLERHFKSECQNDLRTNSCIKCGMKFIWRENLVAHNCFQVEKTPEEKRQCEVCGKKFIWLKDLHRHKRSHIPYEKKFECLICARKFNRKDNMRAHMKIHNTDTQVRDKGKINIKWDQQDENLCKPNGQKIIQCKICLSKHNTIRDLTTHLMSHKDPATFKQREAEAREISMMIYGKQMEMQTLERAISKDLEKGSHTRFYSITNEVGYELNLNDSETCSDFDAGYDDDDDDDDDDDAENNEVKNVKRVLKGYNCEICSQNFNRKFKIFEHQRTEHPWEELLYECFRCGAKFVCERIYQMHLLNDCENNEKQFKCKICPMKFAWKENLKNHEKYMHDQNPAMPKKNHCDTCGKSFLWVKDLARHRKTHQTDVEKFECTWCFRVFMRRDNLKVHMKVHQNATHILLPDIYYLARPNGIKVAQCKLCDQNYTSISELAEHIQNGHIKLQMLSITPNPASYSITNALGYEMDINDSETEREGEDQKYVCEICEARYNRRFKLLQHQQSLHYSDNIPHKCIDCSFKCVSELVLNYHMRTQCMNLVKQFRCSKCTMRFMWKENLENHESLIHDGKRKHTCDTCKKDFATQHDLRNHSECKAPTEEKLFKCDLCDRKYNRKDRLMKHAKVHTNEGKEEKPKRIKAETAAGKKFLCAFCGKEVSSSSNLVIHMRRHTGEKPFKCEFCNKGFPRSSDLACHRRTHTGERPHKCTVCGKAFSRSYKLQTHMRIHSGERPYKCTYCEKSFTQSNDLTLHVRRHTGERPYVCETCGERFIQGTALKNHRRMRGHYEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00984436;
90% Identity: -
80% Identity: -