Basic Information

Insect: Dasysyrphus tricinctus
Gene Symbol: -
Assembly: GCA_963921185.1
Location: OY992530.1:276727933-276732639[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.0015 0.42 13.2 3.3 1 23 17 39 17 39 0.98

2 27 4.8e-06 0.0013 21.1 1.2 1 23 46 68 46 68 0.97

3 27 0.00017 0.046 16.2 1.1 1 23 187 210 187 210 0.91

4 27 2.5 6.9e+02 3.1 1.2 1 21 247 267 247 268 0.91

5 27 0.014 3.9 10.2 0.1 3 22 280 299 278 299 0.91

6 27 7.1e-06 0.0019 20.6 1.2 2 23 312 333 311 333 0.97

7 27 0.0002 0.054 16.0 1.8 1 23 340 362 340 362 0.96

8 27 0.19 54 6.6 0.4 2 23 376 397 375 397 0.93

9 27 0.019 5.3 9.7 0.7 1 23 475 498 475 498 0.96

10 27 3.6 1e+03 2.6 0.4 1 21 507 527 507 528 0.92

11 27 1.7 4.8e+02 3.6 0.2 3 19 539 555 538 557 0.93

12 27 0.0041 1.1 11.9 2.7 2 23 569 590 568 590 0.98

13 27 1.9e-05 0.0051 19.2 0.7 1 23 597 619 597 619 0.98

14 27 0.0056 1.5 11.4 2.5 1 23 767 790 767 790 0.98

15 27 0.0051 1.4 11.6 1.5 1 23 827 850 827 850 0.96

16 27 0.028 7.7 9.2 3.6 1 23 860 882 860 882 0.96

17 27 3.5e-06 0.00097 21.5 1.0 1 23 889 911 889 911 0.98

18 27 0.00088 0.24 14.0 0.2 2 23 935 957 935 957 0.96

19 27 0.0013 0.37 13.4 0.7 1 23 998 1021 998 1021 0.97

20 27 0.097 27 7.5 0.7 1 23 1058 1081 1058 1081 0.91

21 27 0.00049 0.13 14.8 1.9 1 20 1087 1106 1087 1107 0.95

22 27 0.00011 0.03 16.8 1.9 1 23 1117 1139 1117 1139 0.98

23 27 1.7e-05 0.0046 19.4 0.3 2 23 1161 1182 1160 1182 0.95

24 27 0.00025 0.07 15.7 3.3 1 23 1188 1210 1188 1210 0.99

25 27 7.3e-07 0.0002 23.7 3.4 1 23 1216 1238 1216 1238 0.98

26 27 6.2e-07 0.00017 23.9 2.4 1 23 1244 1266 1244 1266 0.99

27 27 0.00026 0.071 15.6 0.2 1 23 1272 1296 1272 1296 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.0015	0.42	13.2	3.3	1	23	17	39	17	39	0.98
2	27	4.8e-06	0.0013	21.1	1.2	1	23	46	68	46	68	0.97
3	27	0.00017	0.046	16.2	1.1	1	23	187	210	187	210	0.91
4	27	2.5	6.9e+02	3.1	1.2	1	21	247	267	247	268	0.91
5	27	0.014	3.9	10.2	0.1	3	22	280	299	278	299	0.91
6	27	7.1e-06	0.0019	20.6	1.2	2	23	312	333	311	333	0.97
7	27	0.0002	0.054	16.0	1.8	1	23	340	362	340	362	0.96
8	27	0.19	54	6.6	0.4	2	23	376	397	375	397	0.93
9	27	0.019	5.3	9.7	0.7	1	23	475	498	475	498	0.96
10	27	3.6	1e+03	2.6	0.4	1	21	507	527	507	528	0.92
11	27	1.7	4.8e+02	3.6	0.2	3	19	539	555	538	557	0.93
12	27	0.0041	1.1	11.9	2.7	2	23	569	590	568	590	0.98
13	27	1.9e-05	0.0051	19.2	0.7	1	23	597	619	597	619	0.98
14	27	0.0056	1.5	11.4	2.5	1	23	767	790	767	790	0.98
15	27	0.0051	1.4	11.6	1.5	1	23	827	850	827	850	0.96
16	27	0.028	7.7	9.2	3.6	1	23	860	882	860	882	0.96
17	27	3.5e-06	0.00097	21.5	1.0	1	23	889	911	889	911	0.98
18	27	0.00088	0.24	14.0	0.2	2	23	935	957	935	957	0.96
19	27	0.0013	0.37	13.4	0.7	1	23	998	1021	998	1021	0.97
20	27	0.097	27	7.5	0.7	1	23	1058	1081	1058	1081	0.91
21	27	0.00049	0.13	14.8	1.9	1	20	1087	1106	1087	1107	0.95
22	27	0.00011	0.03	16.8	1.9	1	23	1117	1139	1117	1139	0.98
23	27	1.7e-05	0.0046	19.4	0.3	2	23	1161	1182	1160	1182	0.95
24	27	0.00025	0.07	15.7	3.3	1	23	1188	1210	1188	1210	0.99
25	27	7.3e-07	0.0002	23.7	3.4	1	23	1216	1238	1216	1238	0.98
26	27	6.2e-07	0.00017	23.9	2.4	1	23	1244	1266	1244	1266	0.99
27	27	0.00026	0.071	15.6	0.2	1	23	1272	1296	1272	1296	0.93

Sequence Information

Coding Sequence: ATGAGTACccgaagcaaaacaaaaaaaaccaaatcaAAGTCTGGTCGTTTCGAATGCGACCATTGTAGTAAAACGTTTGCATGGAAGAAAGATCTATTTCGTCATGAAAAATCTCATGAACCTAACACTAAGAAATTCGCGTGTCCACATTGTGATCGTCGATTTATACGAAAGGATAAGCTGCAATCACATGTGCTGGTTCATTTGGGTGGTATTGTGAAACCTCGTTGTTCAAAGGCCACTCTAGCGTTCTCACGTCAGTTGTATTCTcaagaaaaattcaaagaaataatCTGCATGATTTGTAATTATGACAAAGCGGTTAATATAAAAGAGCTTTGTCGTCATATCAGCTTACATGACATGCAACAAGTTGAATGTTTTGAGAATAGTGAATGTGTTAAGAGGTTTTACGCTGGCAAGGACTTGCAAGAAGTCATGATGCTAATAACTAATCAAATTGAACAGAAAGAGTATGGAAAATTACATTCCATTGTCAATGCAAATGGCTTCGAGATGGGTATCAGTGATTCTGATGAGAGCGATGCTGAAACTTCGTACATATGTGAAATTTGCAACGAGTCCtttaatcgaaaacacaagctTATAGCACATTCATTTTCTGGGCATACTGTTGACGAGTGTTCATATAAATGCGATAAATGTAAACTGGAATTCACTTGCAAAGAAGTTTTTGATAGCCATCAGAAACACCATTGTAGCAATGCCGACAAAGAGTTTCATTGTGAGAACTGTCCAGCTAGATTCGCTTGGCCTCAAAATTTTGCGAATCATAGATGTAACAAAGAAAGCGAGTCTCTTAAGGATAAAACTGTCTGCGAGCCTTGCGGAGAAGTTTTCGCCACTCAAAAGGCTCTTCGACTTCATAAAAAAACCAAATGTGGCACAGTAGAGCTTGACAAAGAGAGCACCACCTGTGAAATTTGCAATAAAGTCTTTAGTTTCCCCAGAGATTtgagaaaacataaaaaaatacatataccaGACGGTAAGTCTCACGATTGTTCTGTATGTGGCGAGAAATTCCTTCGTTCCGACAATCTCCGAAACCATTTAAAATCGCACACCAGTAAGCTTGAAAGACCACTGGTAGCAAAGAAATTAATGTGTATGCTCTGTGGCGATAGATTCACAACCATAGGTAGCTTAAGATACCATTTGTTTAACCATTCCGATGGTCAATCTGAAATTGACTTCGATAATTCCGGTTTCGTTTTGAACTTCTACCCTGGTGTGGGTAAGGAAGTTGTTTCGGAGTACATAAAGAATTGCTTCAATGAGCAAAAACTCTCTCAACTGTATTTAGCGGTTAATAAAATCGGTCTTGAAATGACATTAAGTGATTCGGACAGTGATGACGATGAACAAACCTACAAAGATCAAGATACTCCTTCGAAAACTTACGTATGTGAGTTGTGTAATGTCAAGTTTCCCCGCCGACAAGCTATTCTTCAGCACCAACATTCTGAACATGATTCGAAAGAGATTAATTTTCCACATAAATGTGTCAAGTGTGAAGATCAATTTGTATCTGGAGCCCTTTTAGAGcgtcattttaaaagtgaatgtCAAAATGATGCCAGAACTAATGCTTGCGTTAAATGTGgtattaaatttatttggaaGGAAAATTTAGTCGCTCATAGTTGtttcaaagaagaaaaaagtccGGAAGAGAATAAACAATGTGAAGTGTGTGGTAAGAAGTTTATTTGGCTGAAGGATTTGCATCGACATAAACGAAGCCACATACCTTATGAGAAAAAATTCGAGTGTCTTGTTTGTGCTAGAAAGTTCAACCGCAAAGACAACATGCGAGCTCATATGAAAGTTCACACTACTGAAAATCAAGTTAAAGATAAAGCAAAGATATCGATTAAGTGGGAACAACAGGATGAGAATCTTTGCAAGCCCAATGGACATAAAGTTATTCAGTGTAAGATCTGTTTGTCAAAGCATAACACAATCAAAGATTTAACAACTCATTTGATGAGCCACAGAGACCCTGCAACCTTCAAACAAAGAGAGGCAGAAGCCAGAGAGATTTCAATGATGATATATGGCAAGCAAATGGAGATGCAAACTCTTGAAAGAGCAATTTGCAAAGATCTTGAGAAAGGCAGCAATACACGTTTTTATTCAATCACCAACGAAGCCGGTTATGAGCTGAACTTAAATGATTCGGAAACCTGTTCAGACTTTGATGCggacgatgacgatgatgacgatgacgatgatgatgaagtgTTAAAAGATCGGAAACGTGTCCTTAAAGGATACAACTGCCAAATATGTAGTCAAAACTTTAAtaggaaattcaaaatttacgAACATCAAAGAACGGAACATAAATGGGAGGAATTGCCATACGAGTGCAATCGATGTGGTTCTAAGTATGTGTGTGAGAGAATTTATCAATTACATTTGCAAAATGATTGTGAAAATAATGAGAAACAATTCAAATGTAAAACTTGTCCGATGAAATTCGCTTGGAAAGAGAATCTTAAGAATCATGAGAAGTATATGCATGATCAAAATCCAGCAATGCCAAAGAAACATCATTGCGATATTTGTGGAAAGAGTTTCCTTTGGGTAAAGGATTTGACGCGCCATCAGAAGACACATCAAACAGAAGATGAGAAATTCGAATGCACGTGGTGCTTTAGAGTCTTCATGCGGAGGGATAATCTTAagGTTCATATGAAAGTGCACCAGAACGCTACACACATCCTGCTGCCAGACATTTACTACCTTGCCCGTCCCAATGGGGCAAAAGTTGCTCAATGCAAACTTTGTGATCAGCAATATACAAACATCTCTGATTTAGCAAACCACATTCAAAATGGACACATTAAACTACAGATGCTCAGCATCACTCCCAATCCAGCCAGCTATTCAATAACGAATGCTTTAGGCTATGAGATGGATATAAATGATTCCGAAACCGAGCGCGAGGATGATGATGACAAGTACGTTTGTGAGATTTGTGAGGCTCGATATAACCGTCGCTTTAAATTGCTGCAACATCAGCAATCGCTACATTACTCTGACAACATTCCTCACAAGTGTATCGATTGTAGTTTCAAATGCGTGTCAGAGCTAGTGCTCAATTATCATATGCGAACGCAGTGCATGAATCTTGTTAAGCAGTTCCGCTGCAGCAAGTGCACTATGCGTTTCATGTGGAAGGAGAATCTTGAAAACCACGAGAGCTTGATTCACGATGGTAAACGGAAACATACTTGCACcgtttgcaaaaaagatttcgCGACACAGCATGACCTGAGAAATCACACAGAATGCAAAGCCCCAGCAGAGGAAAAACTCTTCAAATGCGACTTGTGTGATCGTAAATACAATCGAAAAGATCGACTCATGAAACATGCGAAAGTTCACACTGCCGGCGGAAAGGAAACGAAAGCGAAACGTATAAAAACCGAAGCATCTGACAAAAAATTCTTATGTGCATTTTGTGGTAAGGAAGTGTCTAGTTCATCCAATCTCGTAATACACATGAGACGGCACACGGGTGAGAAGCCGTTCAAGTGTGAATTTTGTAATAAAGGCTTCCCTAGATCTTCAGATTTGGCTTGTCATAGACGAACGCATACTGGAGAACGACCACACAAGTGCACAGTGTGTGAAAAGGCATTCTCCCGTTCGTACAAACTTCAGACTCATATGCGAATTCATTCTGGAGAGAGACCTTATAAGTGCACTTACTGTGAGAAGAGCTTTACACAATCCAATGATTTGACACTTCATGTACGTCGACATACAGGTGAAAGACCCTATGTTTGTGAAACATGTGGCGAAAGATTTATACAAGGAACGGCACTTAAAAACCATAGAAGAATGCGCGGACATTacgaaatttaa
Protein Sequence: MSTRSKTKKTKSKSGRFECDHCSKTFAWKKDLFRHEKSHEPNTKKFACPHCDRRFIRKDKLQSHVLVHLGGIVKPRCSKATLAFSRQLYSQEKFKEIICMICNYDKAVNIKELCRHISLHDMQQVECFENSECVKRFYAGKDLQEVMMLITNQIEQKEYGKLHSIVNANGFEMGISDSDESDAETSYICEICNESFNRKHKLIAHSFSGHTVDECSYKCDKCKLEFTCKEVFDSHQKHHCSNADKEFHCENCPARFAWPQNFANHRCNKESESLKDKTVCEPCGEVFATQKALRLHKKTKCGTVELDKESTTCEICNKVFSFPRDLRKHKKIHIPDGKSHDCSVCGEKFLRSDNLRNHLKSHTSKLERPLVAKKLMCMLCGDRFTTIGSLRYHLFNHSDGQSEIDFDNSGFVLNFYPGVGKEVVSEYIKNCFNEQKLSQLYLAVNKIGLEMTLSDSDSDDDEQTYKDQDTPSKTYVCELCNVKFPRRQAILQHQHSEHDSKEINFPHKCVKCEDQFVSGALLERHFKSECQNDARTNACVKCGIKFIWKENLVAHSCFKEEKSPEENKQCEVCGKKFIWLKDLHRHKRSHIPYEKKFECLVCARKFNRKDNMRAHMKVHTTENQVKDKAKISIKWEQQDENLCKPNGHKVIQCKICLSKHNTIKDLTTHLMSHRDPATFKQREAEAREISMMIYGKQMEMQTLERAICKDLEKGSNTRFYSITNEAGYELNLNDSETCSDFDADDDDDDDDDDDEVLKDRKRVLKGYNCQICSQNFNRKFKIYEHQRTEHKWEELPYECNRCGSKYVCERIYQLHLQNDCENNEKQFKCKTCPMKFAWKENLKNHEKYMHDQNPAMPKKHHCDICGKSFLWVKDLTRHQKTHQTEDEKFECTWCFRVFMRRDNLKVHMKVHQNATHILLPDIYYLARPNGAKVAQCKLCDQQYTNISDLANHIQNGHIKLQMLSITPNPASYSITNALGYEMDINDSETEREDDDDKYVCEICEARYNRRFKLLQHQQSLHYSDNIPHKCIDCSFKCVSELVLNYHMRTQCMNLVKQFRCSKCTMRFMWKENLENHESLIHDGKRKHTCTVCKKDFATQHDLRNHTECKAPAEEKLFKCDLCDRKYNRKDRLMKHAKVHTAGGKETKAKRIKTEASDKKFLCAFCGKEVSSSSNLVIHMRRHTGEKPFKCEFCNKGFPRSSDLACHRRTHTGERPHKCTVCEKAFSRSYKLQTHMRIHSGERPYKCTYCEKSFTQSNDLTLHVRRHTGERPYVCETCGERFIQGTALKNHRRMRGHYEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00984436;
90% Identity: iTF_00664263;
80% Identity: -