Basic Information

Insect: Melanostoma scalare
Gene Symbol: -
Assembly: GCA_949752695.1
Location: OX456986.1:165261779-165269849[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00025 0.065 15.6 1.9 1 23 49 71 49 71 0.98

2 27 4.7e-06 0.0012 21.0 1.9 1 23 78 100 78 100 0.98

3 27 1.1 2.7e+02 4.2 3.0 1 23 220 243 220 243 0.91

4 27 0.23 59 6.3 0.3 2 20 281 299 280 301 0.92

5 27 0.0046 1.2 11.6 1.2 2 22 313 333 313 333 0.94

6 27 7.3e-07 0.00019 23.6 1.6 2 23 346 367 345 367 0.97

7 27 0.00031 0.08 15.3 0.7 1 23 374 396 374 396 0.96

8 27 0.0045 1.2 11.6 0.2 2 23 410 431 409 431 0.92

9 27 0.14 37 6.9 0.6 2 23 511 533 510 533 0.93

10 27 1.5 3.8e+02 3.7 0.2 3 19 574 590 573 592 0.93

11 27 0.0039 1 11.8 2.7 2 23 604 625 603 625 0.98

12 27 1.8e-05 0.0046 19.2 0.7 1 23 632 654 632 654 0.98

13 27 4.2 1.1e+03 2.3 1.4 2 23 687 708 686 708 0.94

14 27 0.012 3.1 10.3 2.6 1 23 798 821 798 821 0.98

15 27 0.0014 0.36 13.2 1.0 1 23 858 881 858 881 0.96

16 27 0.51 1.3e+02 5.2 3.6 1 23 891 913 891 913 0.94

17 27 3.4e-06 0.00088 21.5 1.0 1 23 920 942 920 942 0.98

18 27 0.0014 0.37 13.2 0.1 2 23 966 988 966 988 0.96

19 27 0.00037 0.095 15.1 0.7 1 23 1029 1052 1029 1052 0.97

20 27 0.28 74 6.0 0.8 1 23 1089 1112 1089 1112 0.92

21 27 0.0018 0.47 12.9 3.6 1 20 1118 1137 1118 1138 0.95

22 27 0.00011 0.028 16.7 0.8 1 23 1148 1170 1148 1170 0.98

23 27 1.6e-05 0.0041 19.3 0.3 2 23 1193 1214 1192 1214 0.95

24 27 0.00024 0.063 15.6 3.3 1 23 1220 1242 1220 1242 0.99

25 27 7e-07 0.00018 23.6 3.4 1 23 1248 1270 1248 1270 0.98

26 27 6e-07 0.00016 23.8 2.4 1 23 1276 1298 1276 1298 0.99

27 27 0.00025 0.064 15.6 0.2 1 23 1304 1328 1304 1328 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00025	0.065	15.6	1.9	1	23	49	71	49	71	0.98
2	27	4.7e-06	0.0012	21.0	1.9	1	23	78	100	78	100	0.98
3	27	1.1	2.7e+02	4.2	3.0	1	23	220	243	220	243	0.91
4	27	0.23	59	6.3	0.3	2	20	281	299	280	301	0.92
5	27	0.0046	1.2	11.6	1.2	2	22	313	333	313	333	0.94
6	27	7.3e-07	0.00019	23.6	1.6	2	23	346	367	345	367	0.97
7	27	0.00031	0.08	15.3	0.7	1	23	374	396	374	396	0.96
8	27	0.0045	1.2	11.6	0.2	2	23	410	431	409	431	0.92
9	27	0.14	37	6.9	0.6	2	23	511	533	510	533	0.93
10	27	1.5	3.8e+02	3.7	0.2	3	19	574	590	573	592	0.93
11	27	0.0039	1	11.8	2.7	2	23	604	625	603	625	0.98
12	27	1.8e-05	0.0046	19.2	0.7	1	23	632	654	632	654	0.98
13	27	4.2	1.1e+03	2.3	1.4	2	23	687	708	686	708	0.94
14	27	0.012	3.1	10.3	2.6	1	23	798	821	798	821	0.98
15	27	0.0014	0.36	13.2	1.0	1	23	858	881	858	881	0.96
16	27	0.51	1.3e+02	5.2	3.6	1	23	891	913	891	913	0.94
17	27	3.4e-06	0.00088	21.5	1.0	1	23	920	942	920	942	0.98
18	27	0.0014	0.37	13.2	0.1	2	23	966	988	966	988	0.96
19	27	0.00037	0.095	15.1	0.7	1	23	1029	1052	1029	1052	0.97
20	27	0.28	74	6.0	0.8	1	23	1089	1112	1089	1112	0.92
21	27	0.0018	0.47	12.9	3.6	1	20	1118	1137	1118	1138	0.95
22	27	0.00011	0.028	16.7	0.8	1	23	1148	1170	1148	1170	0.98
23	27	1.6e-05	0.0041	19.3	0.3	2	23	1193	1214	1192	1214	0.95
24	27	0.00024	0.063	15.6	3.3	1	23	1220	1242	1220	1242	0.99
25	27	7e-07	0.00018	23.6	3.4	1	23	1248	1270	1248	1270	0.98
26	27	6e-07	0.00016	23.8	2.4	1	23	1276	1298	1276	1298	0.99
27	27	0.00025	0.064	15.6	0.2	1	23	1304	1328	1304	1328	0.93

Sequence Information

Coding Sequence: ATGGTTATCCGAGGCTGGTGGTCGTTTTGGAATAGTGTAGTTCTTACGTGCAAAAAGACGAAAAAAATCCTCAAATCGCGAAGACAACGTTCCAACATAAGCACCCGTAGCCAATCGAAAAGATCAAAATCTCCAAGCGGTCGTTTTGAATGTGACTACTGTAGCAAAACATTTGCCTGGAAAAAAGACTTGTTCCGCCATGAAAAAACTCATGTGCCGAATACAAAGAAATATTCCTGTCCACACTGTGATCGTCGTTTCATTCGAAAGGACAAACTCTCCTCCCATCTACTTGTGCATTTGACTGGTATTGTCAAAGCTCGTTATACAAAAGCAACTCGATTATTCTTAAGTCGTTTGTATTCGAATGAGAAATTCAAAGAAATGGTTTGCATGATTTGTAACTATGACAAAGCTCAAAACGTCTCTGAACTGCGGAAGCACATAAGCTTACACATTAATTTGGATTTGGTAGAAAACTTCGCTGAGAGCGAGTGTGTCAAACGATTTTATGCCGATAAAGAACTACCCGAAGTCAGAACATTGATTGCAGGTCAAATCGAACAAAAACAATTCGGAAAGCTGCATTCGATTGTCAATGTACATGATCATGAGATGGGCATCAGTGATTCAGATGAAAGTGATGGAGAAAAGACTTACGTCTGTGAAGTTTGTTGTGATTCTTTCAGTCGGAAGCACAAGCTCATGCAACATGCAGCCAATTCACACTCTGCAGCAGATTGTGCTTACAAATGTGACAAATGCAAGTTAGAGTTCACTTGCGAGAGTGTTTTCAATAGCCACAAAAAACACCACTGTGAAAATTCTGACAAAGAACTGCAATGTGAAAACTGCCCAGCTCGATTTACCTGGCCCAAGAATCTGGCCAATCACAAGTGTGGTAAAGAAAACGACTCATTTTCTAAAGACGGCAACACCTGTGAGACTTGTGGTGAAACTTTCACCATGCGAAAAGACTTCCGGcttcacaaaaaaacaaaatgcggAACCGTTGAGCTTGACAAGGAGAGCACAACTTGTGAAATATGTGGTAAAATGTTCAGTTTCCCTCGAGATTTGAAGAAGCACAAGAGGACTCATATTCCAGATGGCAAGTCGCATGACTGTTCCGTGTGTGGGGAGAGATTCCTTCGTGCGGAAAATCTCCGAAGCCATTTGAAGGTTCACTCTAGTAAAGTCGAACGGCCCCTGCTAGCTAAAAAGCTTATGTGTATGCTCTGCGGTGCGAGTTTCACGTCAATCAGCAGTCTGCGATACCATCTATTCGCCCATTCTGATGGTAAAACCGAAATCGATTTCGAAAACTGCGGATTTGTTCTTAGTTTTTATCCGGGTGTATGTAAAGATGTTGTTGCAGACTATATTCGCAACTGTTTCAACGAGCAAAAACTATCACAGTTGTATATAGCGGTTAATAAATATGGTCTCGAGATAACGCTGAGTGATTCTGACAGCGACGATGATGAGGACCAAAAATTCACAGAGGAAAAGCATCCTCCCAGATCGCTTGTTTGTGAGTTGTGCGATGTGAAGTTCCCTCGACATCAAACGATTCTTCAGCATCAATACTCCGAACATGATCCGAAAAATGTTAAGTACTCCTACAAGTGCAGTAAATGTGAGGATCAATTTGTGTGTGAAGCACTTCTCCTTCGCCATGAAAAAAATGATTGCCAGAATGAGGCAAAAACGAATGCTTGCGTCAAGTGCGGAATTAGGTTCATTTGGAAGGAGAACCTTTTGGCACATAATTGTTTCCGGGAAGAGAAGAGTCCCGAGGAGAACAAGCAATGCGAAGTGTGTGGCAAGAAGTTCATTTGGCTAAAGGATTTACATAGACACAAACGAAGCCACATACCGTATGAGAAGAAGTTCGAATGTTTAGTGTGTGCCAGGAAGTTTAATCGAAAAGACAACATGCGTGCACACATGAAAGTTCACACCTCTGAAAATACACTCAAAGAAAGATCAAAAGTGTCCATCAAATGGGAACAGCAAGATGAGAATTTGTGCAGACCGAATGGAgaaaaagttattcagtgtaAGATCTGCCTAACCAAACATAATACAATCAAGGACTTGACAACTCATTTGATGGCCCACAAAGACCCCGAAACTTTCAAACATCGCCGAACAGAGGCACGAGAAATCTCTATGATGATCTATGGAAAGCAAATGGAAATGCAGGTACTCGAACGAGCAATATGTAAAGACCTCGAAAGTGGTAGTCATGCACGTTTCTATTCAATCACAAACGAAGCGGGCTACGAGCTGACTCTTAACGACTCGGAAACCTGCTCAGATTTTGATGCAGATGAAAATGAGGATTCCGATGAAGATGAAGAGAACAAGAAACGTATGTTAAAAGGCTACAACTGCCAAATGTGCGCTAGGAactttaatagaaaatttaaaatcttcgaACATCAAAGAACGGAACACACGTGGGAGGAGTTGCCGTACGAGTGCCACCGATGTGGTTCTAAATTCGTATGTGACCGCATTTATCAGTTGCATCTGCAGAACGAGTGTGAAAACaatgagaaaaatttcaaatgcaaaATTTGTCCTATGAAATTCGCCTGGAAGGAGAATTTAAAGAATCACGAAAAGTATATGCACGATCAGAATCCAGCCATGCCAAAGAAACATCATTGTGACTCGTGCGGGAAGAGTTTTCTGTGGTTGAAGGATTTGACACGGCATCAGAAAGGACATCAGGTTGAAGAGGAAAAATTCGAATGCACTTGGTGCTTTAGAGTGTTTATGCGAAGGGACAATTTGAAGGTTCATATGAAAGTCCATCAAAATGCCACACACATCTTGTTGCCTGACATTTATTATCTGGCTCGTCCGAATGGTACAAAAATAGCCCAATGCAAACTTTGCGATCAAAAATACTCAAACATAGCTGATTTAGCCAACCACATTCAAAACGGACACATAAAGCTGCAGATGCTCAGCATCACTCCCAACCCAGCCAGCTACTCGATTACAAACGCACTAGGCTATGAGATGGATATAAATGATTCTGAAACAGAGCGAGAGGGAGAAGATGAGAAATATGTGTGTGAAATTTGTGATGCACGTTATAATCGCCGCTTCAAATTACTGCAGCATCAGCAATCGCTTCATTACTCCGATAACATTCCGCATAAATGCATAGATTGCAGTTTTAAGTGCGTTTCCGAGCTGGTTCTCAATTATCATATGCGAACGCAATGCATGAACTTGGTAAAACAATTCCGCTGTAGCAAATGTACGATGCGATTTATGTGGAAAGAGAATCTAGACAATCATGAGAATCTAATACACGACGGAAAGCGAAAGCACACATGCAAAGTTTGCAACAAAGATTTTGCAACACATCACGATCTGAAAAACCACACCGAGTGCAAAGCTCCAGCTGAAGTTAAATTATTCGAGTGCGAATTGTGCGATCGAAAGTACAATCGAAAAGATCGATTGATAAAACATGCAAAGGTTCACACCGCTGGGGGAAAAGAGGCAAAATCAAAGCGAATCAAAACCGAAACAGCGGCCGACAAAAagtttttgtgtgctttttgcgGCAAAGAAGTATCGAGCTCGTCAAATCTTGTCATTCATATGCGACGCCACACAGGAGAAAAACCATTTAAGTGTGAGTTTTGTAATAAGGGCTTCCCTCGATCTTCAGATCTGGCATGCCACAGACGGACGCATACCGGAGAACGACCACACAAGTGTACGGTGTGTGAAAAGGCGTTCTCGCGTTCGTACAAACTACAAACACACATGAGGATTCATTCGGGCGAGAGACCATACAAGTGCACTTACTGTGAGAAGAGCTTTACTCAATCCAATGATCTAACACTTCATGTGCGTAGACATACGGGCGAAAGGCCTTACGTGTGTGAGACATGCGGAGAAAGGTTTATACAAGGGACAGCGCTTAAAAATCATCGAAGAATGCGAGGCCATTATGAAatctaa
Protein Sequence: MVIRGWWSFWNSVVLTCKKTKKILKSRRQRSNISTRSQSKRSKSPSGRFECDYCSKTFAWKKDLFRHEKTHVPNTKKYSCPHCDRRFIRKDKLSSHLLVHLTGIVKARYTKATRLFLSRLYSNEKFKEMVCMICNYDKAQNVSELRKHISLHINLDLVENFAESECVKRFYADKELPEVRTLIAGQIEQKQFGKLHSIVNVHDHEMGISDSDESDGEKTYVCEVCCDSFSRKHKLMQHAANSHSAADCAYKCDKCKLEFTCESVFNSHKKHHCENSDKELQCENCPARFTWPKNLANHKCGKENDSFSKDGNTCETCGETFTMRKDFRLHKKTKCGTVELDKESTTCEICGKMFSFPRDLKKHKRTHIPDGKSHDCSVCGERFLRAENLRSHLKVHSSKVERPLLAKKLMCMLCGASFTSISSLRYHLFAHSDGKTEIDFENCGFVLSFYPGVCKDVVADYIRNCFNEQKLSQLYIAVNKYGLEITLSDSDSDDDEDQKFTEEKHPPRSLVCELCDVKFPRHQTILQHQYSEHDPKNVKYSYKCSKCEDQFVCEALLLRHEKNDCQNEAKTNACVKCGIRFIWKENLLAHNCFREEKSPEENKQCEVCGKKFIWLKDLHRHKRSHIPYEKKFECLVCARKFNRKDNMRAHMKVHTSENTLKERSKVSIKWEQQDENLCRPNGEKVIQCKICLTKHNTIKDLTTHLMAHKDPETFKHRRTEAREISMMIYGKQMEMQVLERAICKDLESGSHARFYSITNEAGYELTLNDSETCSDFDADENEDSDEDEENKKRMLKGYNCQMCARNFNRKFKIFEHQRTEHTWEELPYECHRCGSKFVCDRIYQLHLQNECENNEKNFKCKICPMKFAWKENLKNHEKYMHDQNPAMPKKHHCDSCGKSFLWLKDLTRHQKGHQVEEEKFECTWCFRVFMRRDNLKVHMKVHQNATHILLPDIYYLARPNGTKIAQCKLCDQKYSNIADLANHIQNGHIKLQMLSITPNPASYSITNALGYEMDINDSETEREGEDEKYVCEICDARYNRRFKLLQHQQSLHYSDNIPHKCIDCSFKCVSELVLNYHMRTQCMNLVKQFRCSKCTMRFMWKENLDNHENLIHDGKRKHTCKVCNKDFATHHDLKNHTECKAPAEVKLFECELCDRKYNRKDRLIKHAKVHTAGGKEAKSKRIKTETAADKKFLCAFCGKEVSSSSNLVIHMRRHTGEKPFKCEFCNKGFPRSSDLACHRRTHTGERPHKCTVCEKAFSRSYKLQTHMRIHSGERPYKCTYCEKSFTQSNDLTLHVRRHTGERPYVCETCGERFIQGTALKNHRRMRGHYEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00984436;
90% Identity: -
80% Identity: -