Ltri000619.2
Basic Information
- Insect
- Lydus trimaculatus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_037414755.1
- Location
- JAZBGY010000041.1:12487-14688[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-113 4.5e-109 364.0 30.6 1 300 48 367 48 367 0.89 2 2 0.083 5.9e+02 -0.8 3.9 121 174 366 416 365 441 0.65
Sequence Information
- Coding Sequence
- ATGagtgaaattaataataatgaagttgTACAAATTGAGGGTGTTACAAAAGGTGAAACTTCCGatttttctgataataatcGAACGTTttgtgatgatgttgatgttatCGAAACAATGTTGCAAAATTCTAGTGATAAAgCAGAAGCACGACTTTGGGCCAAACGACAAGCCAGAGCTGAAGCTAGAGAAATTCGTATGCGTGAACTGGAACGTCaacaaaaagaacaagaaGAGAATGCTGATCGACAATTCGATATGTTATCAGAACCAATATCAAGACAATCTAGGGCAATTACAGCAGGAGTTGGTGGTGGTAGCAGTAGTAGATATTTGTCTAGTAGACGAAGTTCGGAAGATTCCCTGGAAGATGGTGGTAGTCTTCGGGATTTACGGAATGAATTAAAGGAAGTTGAAGAGAAATTCCGGAAAGCGATGATTGCTAATGCTCAacttgataatgataaaacatcACAAACATATCAACTGGAATTACTCAAAGATCGgaTAGAAGAATTAGAAGAGGAACATTCACAATTGAAACGTGAACATAGAGAAAAATGTAGGGAATGTGATCAATTAAAGCGATTATGTGcaaaattaaaagatgattTGGCTGTGACAAAAGCTGAATTAATTGAACGTGATCAATTAATTGCTGAAAAAGGTTTAGTGATTGTTGGTGATgatacaattataattgaagatgaacaacaacaacaacaacaaacaaatggcGATATTAGTCttaataatagtttaaatGGTACACCGAAAAGAGCTTTAGTTAGTATTGAAAAtgcacaattattagaaagtgCAGGTGAAGGTAGTTTAGATGTACGATTAGCGAAATTTGCAAAAGATAAAAGTGAATTACAAGatcaaattaatcatttaaaattggaattagaagaagaaaggaataaacgtaaaaaatctattagtggtggtggtggtaataatacaACACAGAATGGACCATCTTCTTCGTCATCTTTTGATTATGATACTGATGAAATTGATATAcaaagAGAAGCTAGTAGACAATTAGGTGATTATAAATTTCGTGCACAGAAAGCTGAACAAGATGTTGCAACATTACAAGCAACTGTTGCAAGATTAGAAAGTCAAGTAATACGATATAAAGCCGCAGCTGAAGTATCTGAAAAATCTGAAGAAGcattgaaattagaaaaaagaaaattacaaagagAAGCAAGAGAAGCATTAAGTCGTGCTGAAGAATTGGAAACATCAAATACACATCTATTGAAACGTTTAGATAAATTGAAGAATGCTAAATCGGCTTTATTGAAAGAACTCTGA
- Protein Sequence
- MSEINNNEVVQIEGVTKGETSDFSDNNRTFCDDVDVIETMLQNSSDKAEARLWAKRQARAEAREIRMRELERQQKEQEENADRQFDMLSEPISRQSRAITAGVGGGSSSRYLSSRRSSEDSLEDGGSLRDLRNELKEVEEKFRKAMIANAQLDNDKTSQTYQLELLKDRIEELEEEHSQLKREHREKCRECDQLKRLCAKLKDDLAVTKAELIERDQLIAEKGLVIVGDDTIIIEDEQQQQQQTNGDISLNNSLNGTPKRALVSIENAQLLESAGEGSLDVRLAKFAKDKSELQDQINHLKLELEEERNKRKKSISGGGGNNTTQNGPSSSSSFDYDTDEIDIQREASRQLGDYKFRAQKAEQDVATLQATVARLESQVIRYKAAAEVSEKSEEALKLEKRKLQREAREALSRAEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01566242; iTF_00987126; iTF_01366329; iTF_00814404; iTF_00813715; iTF_00841847; iTF_00078467;
- 90% Identity
- -
- 80% Identity
- -