Amac005768.1
Basic Information
- Insect
- Anaspis maculata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_949128115.1
- Location
- OX421961.1:108599105-108602745[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-111 4.8e-107 359.0 29.8 1 300 76 370 76 370 0.93 2 2 0.016 7e+02 0.5 3.9 120 174 368 419 368 440 0.77
Sequence Information
- Coding Sequence
- ATGACGGATGTGGACGAAATAAAGTTGGATAACGACAGTGGTAGTGGTGACGAAGAACCGGAATCCACTGAAGAAGAGACGGTCGCGCAGGATGAAACAGTGTTGTTGATTGAGGGCGTAACCAGGAGTGAGAGCTCAGATTTTGACGGCGGCAATAGAAATTGCAAAGCAGTTTGCGGCGACGATGATGTCATTACGAACTTGATGCACAATTGCAGCGATGAAGCGGAAGCGAGATTGTGGGCCAAAAGGCAGGCCAGAGCTGAAGCAAGGGAGATTCGCATGCGCGAGCTGGAGCGGCAACAGAAGGAACAAGAAGAGAATGCCGACAGACAGTTCGACATGCTGGCCGAGCCCTTGGCGAGGACGCCGAGGACGGCAGCCAGCGGAAGTCGGTTCTTGTCCAGCAGGAGGAGCTCCGAGGATTCCCTAGAGGATAGCGGGAGTCTTCGGGATATACGGAACGAACTGAAGGAGGTGGAGGACCGATTTCGTAAAGCAATGATAGCCAATGCTCAGCTCGACAATGACAAAGCCGCTCAAACATATCAGTTAGAGTTATTAAAGGATAGATTAGAAGAATTAGAAGAGGAACATTCCCAGTTGAAACGAGAGCACAGAGACAAATGCCGAGAGCACGACCAGCTCAAGAGGCTGTGTGCGAAATTGAAAGACGATTTGGCTGTGACCAGGGCGGAGCTCGTCGAACGGGACCAACTAATCGCCGAAAAGGGTCTGGTGATCGTCGGCGAGGAGGGCCTCATCGACGAAGAACTGAGAAACGGCGACTCCAGCCTGAGCAGCCTGGGCACTCCAAGGAAAGCACTGGTCAGTGCGGAAAACGCACATCTGCTGGAGAGCGTCGGCGAGGGCAGCCTGGACGTCCGACTGGCCAAGTTCGCCAAAGAAAAGGGCGAACTGCTCGACCAGCTAAGCAGCTTGAAGTTAGAACTGGAAGAAGAGCGAAGCAAACGGAAGAAGTCCAGCGGCACCCTGAACGGACCGAACTCAGATTGCGACGCGGACGAGCTAGATTTACAGAGGGAAGCTAGTAAACAGCTGGGCGATTACAAATTCAGGGCGCAGAAGGCGGAGCAAGACGTGGCTACGTTGCAAGCCACTGTTGCTCGTTTAGAAACTCAAGTCATTCGCTACAAAGCGGCAGCGGAGATTTCGGAAAAATCCGAAGAATCTCTGAAAacagaaaaaaggaaattgCAAAGAGAGGCTCGAGAGGCGCTGAGCAGAGCAGAAGAATTAGAAACGTCAAATACACATCTGCTCAAAAGATTAGATAAATTGAAGAATGCAAAATCGACGTTATTGAAAGAACTCTGA
- Protein Sequence
- MTDVDEIKLDNDSGSGDEEPESTEEETVAQDETVLLIEGVTRSESSDFDGGNRNCKAVCGDDDVITNLMHNCSDEAEARLWAKRQARAEAREIRMRELERQQKEQEENADRQFDMLAEPLARTPRTAASGSRFLSSRRSSEDSLEDSGSLRDIRNELKEVEDRFRKAMIANAQLDNDKAAQTYQLELLKDRLEELEEEHSQLKREHRDKCREHDQLKRLCAKLKDDLAVTRAELVERDQLIAEKGLVIVGEEGLIDEELRNGDSSLSSLGTPRKALVSAENAHLLESVGEGSLDVRLAKFAKEKGELLDQLSSLKLELEEERSKRKKSSGTLNGPNSDCDADELDLQREASKQLGDYKFRAQKAEQDVATLQATVARLETQVIRYKAAAEISEKSEESLKTEKRKLQREAREALSRAEELETSNTHLLKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00929573;
- 90% Identity
- -
- 80% Identity
- -