Ipal009201.2
Basic Information
- Insect
- Iselma pallidipennis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_037464855.1
- Location
- JAZBHA010001145.1:4321-6660[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-114 2.3e-110 368.3 27.4 1 300 53 355 53 355 0.92 2 2 0.039 2.7e+02 0.3 3.6 120 172 353 402 352 418 0.79
Sequence Information
- Coding Sequence
- atggCTGATTTAGAtggtgaaattaataataatgatacaattTTCATGATAAATGGTGTTACAAAGGGTGAAACTTCCGattttggtgataataataggatGATttgtgatgatggtgatgttaTTGAGACAATGTTGCAAAATTCTAGTGATAAaGCGGAAGCACGACTTTGGGCCAAACGACAGGCCAGAGCTGAAGCTAGAGAAATACGTATGCGCGAACTGGAGCGACAACAGAAAGAACAAGAAGAGAATGCTGATCGACAATTCGATATGTTGGCTGAACCAATTACAAGACCATCCAGAACAATTACATCAGGCAGCAGGTATCTGTCTAGTAGACGAAGTTCTGAAGATTCCTTGGAAGATGGGGGCAGTCTTCGAGATTTACggaatgAATTAAAGGAAGTTGAAGAGAAATTCCGGAAGGCGATGATTGCTAATGCTCAACTTGATAACGATAAAACAGCCCAAACATATCAACTGGAACTACTCAAAGATCGaatagAAGAATTGGAAGAGGAACATTCACAATTGAAACGTGAACATCGAGAGAAATGTCGTGAATGTGATCAATTGAAACGATTATgtggaaaattaaaagatgatCTGGCTGTGACTAGAGCTGAATTGGTTGAAAGAGATCAATTAATTGCTGAAAAAGGTTTAGTAATTGTCGGTGATGATACATTAATTGATGAAGAACAAAGAAATGGAGATGTTAGTCTTAATAGTAGtctaggtggtggtggtggtacacCAAAAAGGGCATTAATTAGTGCTGAAAATGcacaattattagaaagtGCCGGTGAAGGTAGTCTAGATGTACGATTAGCTAGATTTGCAAAAGAGAAAAGTGAATTACAAGATCAAATTAgtcatttaaaattagaattagaagAGGAGAGAAGTAAACGGAAAAAATCTAGTGGTGGTAATAGTACCCAGAATGGACCATCTACTGATTATGATGCAGACGAAATCGATATACaaaGGGAAGCTAGTAGACAACTGGGTGATTATAAATTTAGAGCACAGAAAGCTGAACAAGATGTTGCTACATTGCAAGCAACTGTAGCTAGATTAGAAAGTCAGGTAATTCGATATAAAGCAGCAGCTGAAATGTCGGAAAAGTCAGAAGAAGCATTGAAATTGGAAAAGAGAAAGTTACAGAGAGAAGCAAGAGAAGCATTAAGTCGTGCTGAAGAATTGGAAACATCCAATACACATCTTTTAAAACGTTTAGATAAATTGAAGAATGCTAAATCGACGTTATTAAAGGAACTCTGA
- Protein Sequence
- MADLDGEINNNDTIFMINGVTKGETSDFGDNNRMICDDGDVIETMLQNSSDKAEARLWAKRQARAEAREIRMRELERQQKEQEENADRQFDMLAEPITRPSRTITSGSRYLSSRRSSEDSLEDGGSLRDLRNELKEVEEKFRKAMIANAQLDNDKTAQTYQLELLKDRIEELEEEHSQLKREHREKCRECDQLKRLCGKLKDDLAVTRAELVERDQLIAEKGLVIVGDDTLIDEEQRNGDVSLNSSLGGGGGTPKRALISAENAQLLESAGEGSLDVRLARFAKEKSELQDQISHLKLELEEERSKRKKSSGGNSTQNGPSTDYDADEIDIQREASRQLGDYKFRAQKAEQDVATLQATVARLESQVIRYKAAAEMSEKSEEALKLEKRKLQREAREALSRAEELETSNTHLLKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00929573;
- 90% Identity
- -
- 80% Identity
- -