Hpha006543.1
Basic Information
- Insect
- Hycleus phaleratus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_013841185.1
- Location
- JACDRP010000092.1:12805-21559[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-109 7.4e-105 350.0 33.5 1 300 28 333 28 333 0.92 2 2 0.068 8.5e+02 -1.5 5.4 120 174 331 382 331 407 0.71
Sequence Information
- Coding Sequence
- ATGGACGGCGTTGGTGGCCGAAGACGTTTAGCTGCCAAATCGTCTGCTGAGGACCAGGCGCTTGATCAAATCGCTAAAGAGGCAGAAGCACGACTTTGGGCCAAACGACAAGCTAGAGCTGAAGCTAGAGAAATTCGTATGCGCGAACTGGAGCGCCAACAGAAAGAACAAGAAGAGAATGCTGATCGACAATTCGATATGTTATCAGAACCGATTTCAAGAGCAACAAGGTCGATTACTAGTGGCAGTAGATATCTGTCTAGTCGGCGAAGTTCTGAAGATTCCTTGGAGGATGGTGGTAGTCTTCGGGATTTACGGGAAGTCGAAGAGAAATTCCGGAAAGCGATGATTGCAAATGCTCAACTCGATAATGATAAAACGGCCCAAACATATCAACTGGAATTACTCAAAGATCGTATAGAAGAATTAGAAGAAGAACATGCACAATTGAAACGTGAACATAGAGAAAAATGTCGTGAATGTGATCAATTGAAACGTTTATGTGCAAAATTAAAAGATGATTTGGCTGTGACTAAAGCTGAATTAATTGAACGAGATCAATTAATTACTGAAAAAGGTTTAGTAATTGTTGGTGATGATACTATTATTGACGAAGAACAAAGAAATGGCGATATTAGTCTTAATAATAATAGTAATAATAATATAAATAATAGTTTAAATGGTACACCGAAAAGGGCATTAGTTAGTATTGAGAATGCACAATTATTAGAGAGTGCCGGTGAAGGTAGTTTAGATGTACGATTAGCGAAATTTGCAAAAGAAAAAAGCGAATTACAAGATCAAATTAGTCATTTAAAATTAGAATTAGAAGAAGAAAGGAATAAACGGAAGAAATCTAGTAGTGGTATTAATATTAATACCCAAAATGGACCATCTTCTGATTATGATACAGATGAAATTGATATACAACGAGAAGCTAGTAGACAATTAGGTGATTATAAATTTAGAGCACAGAAAGCTGAACAAGATGTTGCTACATTACAAGCAACTGTGGCACGATTAGAGAGTCAAGTGATTCGATATAAAGCAGCAGCGGAAATGTCGGAAAAAGCAGAGGAAGCTTTAAAATTAGAAAAAAGAAAACTACAAAGAGAAGCAAGAGAAGCCTTAAGTCGTGCTGAAGAATTGGAAACTTCCAATACACACCTATTGAAACGTTTAGATAAATTGAAAAATGCCAAATCGGCTTTATTGAAGGAACTTTGA
- Protein Sequence
- MDGVGGRRRLAAKSSAEDQALDQIAKEAEARLWAKRQARAEAREIRMRELERQQKEQEENADRQFDMLSEPISRATRSITSGSRYLSSRRSSEDSLEDGGSLRDLREVEEKFRKAMIANAQLDNDKTAQTYQLELLKDRIEELEEEHAQLKREHREKCRECDQLKRLCAKLKDDLAVTKAELIERDQLITEKGLVIVGDDTIIDEEQRNGDISLNNNSNNNINNSLNGTPKRALVSIENAQLLESAGEGSLDVRLAKFAKEKSELQDQISHLKLELEEERNKRKKSSSGININTQNGPSSDYDTDEIDIQREASRQLGDYKFRAQKAEQDVATLQATVARLESQVIRYKAAAEMSEKAEEALKLEKRKLQREAREALSRAEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00929573;
- 90% Identity
- iTF_00813715;
- 80% Identity
- -