Zimm001457.1
Basic Information
- Insect
- Zonitis immaculata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_037414775.1
- Location
- JAZBGX010000212.1:11955-14255[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-112 1.4e-108 362.5 35.4 1 300 51 354 51 354 0.92 2 2 0.058 4.2e+02 -0.3 3.9 120 174 352 403 352 428 0.69
Sequence Information
- Coding Sequence
- ATGTcagaattgaataataataataataatggtattttaatgattgatgGTGTTACAAAAGGTGAAACTTCGGATTTTAGTGATAATAATCGGATTATTtgtagtgatgatgatgttatCGAGACAATGTTGCAAAATTCTAGTGATAAAgcaGAAGCACGACTTTGGGCTAAACGACAAGCAAGAGCTGAAGCTAGAGAGATTCGTATGCGCGAACTGGAGCGTCAACAGAAAGAACAAGAAGAAAATGCTGATCGACAATTTGATATGTTGGCTGAACCAATGTCAAGAACATCTAGGACAATTACAGGTAGCAGCAGGTATTTATCCAGTAGACGAAGTTCTGAAGATTCCTTGGAAGATGGTGGCAGTCTTCGGGATTTACggaatgaaTTAAAGGAAGTTGAAGAGAAATTCCGGAAAGCGATGATAGCTAATGCTCAacttgataatgataaaacagCACAAACATATCAACTAGAACTACTTAAAGATcgaatagaAGAATTAGAAGAGGAACATTCGCAATTGAAACGTGAACATCGTGAAAAATGTCGAGAATGTGATCAATTGAAAcgattatcaacaaaattaaaagatGATTTGGCTGTGACTAAAGCTGAACTTATTGAAAGAGATCAATTGATCGCTGAAAAAGGTTTAGTAATTGTTGGTGATGatacaataattgaagaaGAACAAAGAAACGGCGATATTagtctcaataataataataataatagtaatagtagttTAAATAGTACACCGAAAAAGGCATTAGTTAGTATTGAGAATgcacaattattagaaagtgCAGGCGAAGGTAGTTTAGATGTACGATTAGCGAAATTTGCGAAAGAAAAATGTGAATTGCAAGACCAAATTAGTCATTTGAAATTAGAATTGGAAGAGGAGCGAAATAAACGGAAAAAATCTGGAATTGCACAAAATGGACCATCGCCTGATTATGATGCCGATGAAATTGATATACAAaGAGAAGCTAATAGACAATTGGgtgattataaatttagagCACAAAAAGCTGAACAAGATGTTGCAACATTACAAGCAACTGTTGCTAGATTAGAAAGTCAAGTAATTCGATATAAAGCAGCAGCTGAAATGTCGGAGAAATCAGAAGAAgcattaaaattagaaaaacgaaaattacaaAGAGAAgCAAGAGAAGCTTTAAGTCGTGCTGAAGAATTGGAAACATCCAATACACATCTATTGAAACGtttagataaattgaaaaatgctAAATCGGCTTTATTAAAAGAACTTTGA
- Protein Sequence
- MSELNNNNNNGILMIDGVTKGETSDFSDNNRIICSDDDVIETMLQNSSDKAEARLWAKRQARAEAREIRMRELERQQKEQEENADRQFDMLAEPMSRTSRTITGSSRYLSSRRSSEDSLEDGGSLRDLRNELKEVEEKFRKAMIANAQLDNDKTAQTYQLELLKDRIEELEEEHSQLKREHREKCRECDQLKRLSTKLKDDLAVTKAELIERDQLIAEKGLVIVGDDTIIEEEQRNGDISLNNNNNNSNSSLNSTPKKALVSIENAQLLESAGEGSLDVRLAKFAKEKCELQDQISHLKLELEEERNKRKKSGIAQNGPSPDYDADEIDIQREANRQLGDYKFRAQKAEQDVATLQATVARLESQVIRYKAAAEMSEKSEEALKLEKRKLQREAREALSRAEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00929573;
- 90% Identity
- iTF_01366329;
- 80% Identity
- -