Mdia003871.1
Basic Information
- Insect
- Meloe dianella
- Gene Symbol
- lrrfip2
- Assembly
- GCA_028455855.1
- Location
- JAPTHL010000015.1:6135841-6140626[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5e-113 6.7e-109 363.4 34.3 1 300 28 333 28 333 0.93 2 3 0.012 1.6e+02 1.0 2.2 120 166 331 377 330 392 0.80 3 3 0.078 1.1e+03 -1.7 3.6 195 237 367 406 344 408 0.52
Sequence Information
- Coding Sequence
- ATGGACGGCGTTGGTGGCCGACGACGTCTTGCTGCCAAATCGTCTGCTGAGGACCAGGCACTTGATCAAATTGCTAAAGAGGCAGAAGCACGACTTTGGGCGAAACGGCAGGCCAGAGCTGAAGCTCGTGAGATTCGTATGCGTGAACTGGAACGTCAACAGAAAGAACAAGAAGAAAATGCTGATCGGCAATTCGATATGTTATCAGAACCAATATCAAGAACATCTAGGGCAATTACAGGAGGCAGCAGGTTTCTGTCTAGTAGACGAAGTTCTGAGGATTCCTTGGAAGATGGCGGCAGTCTACGGGATTTGCGGAATGAATTAAAGGAAGTTGAAGAGAAATTCCGGAAAGCGATGATTGCTAATGCTCAACTTGACAATGATAAAACAGCCCAAACATATCAACTGGAGTTACTCAAAGATCGGATAGAAGAATTAGAAGAGGAACATTCACAATTAAAACGTGAACATAGAGAAAAATGTAGAGATTATGATCAATCAAAACGATTATGTGCAAAATTACAAGATGATTTGGCTGTGACTAATGCTGAATTAATTGAAAGGGATCAATTAATCGCTGAAAAGGGTTTAGTAATTGTTGGTGATGATACAATAATTGAAGAGGAACAAAGAAATGGCGATATTAGTCTTAATAATAATAACAATACTAATAACAATAATAGTTTAAATGGTGGTACGCCGAAAAAGGCATTAGTTAGTTGTGAAAATGCACAATTATTAGAAAGTGCTGGTGAAGGTAGTTTAGATGTACGATTAGCGAAATTTGCAAAAGAAAAGAGCGAATTACAAGATCAAATTAGTCATTTAAAATTAGAATTAGAAGAAGAGAGAAGTAAACGAAAGAAATCTGGTAATACACAGAATGGACCATCTTCTGATTATGATACAGATGAAATTGATATACAAAGAGAAGCTAGTAGACAATTAGGTGATTATAAATTTAGAGCACAGAAAGCTGAACAAGATGTTGCTACATTACAAGCAACTGTGGCAAGATTAGAAAGTCAAGTAATACGATATAAAGCAGCATCTGAAGTGTCTGAAAAAGCAGAAGAAGCACTGAAATTAGAAAAAAGAAAATTACAGAGAGAAGCAAGGGAAGCTGTAAGTCGTGCTGAAGAATTGGAAACATCAAATACACATCTTTTGAAACGTTTAGATAAATTGAAGAATGCTAAATCGGCTTTATTAAAAGAACTTTGA
- Protein Sequence
- MDGVGGRRRLAAKSSAEDQALDQIAKEAEARLWAKRQARAEAREIRMRELERQQKEQEENADRQFDMLSEPISRTSRAITGGSRFLSSRRSSEDSLEDGGSLRDLRNELKEVEEKFRKAMIANAQLDNDKTAQTYQLELLKDRIEELEEEHSQLKREHREKCRDYDQSKRLCAKLQDDLAVTNAELIERDQLIAEKGLVIVGDDTIIEEEQRNGDISLNNNNNTNNNNSLNGGTPKKALVSCENAQLLESAGEGSLDVRLAKFAKEKSELQDQISHLKLELEEERSKRKKSGNTQNGPSSDYDTDEIDIQREASRQLGDYKFRAQKAEQDVATLQATVARLESQVIRYKAASEVSEKAEEALKLEKRKLQREAREAVSRAEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00929573;
- 90% Identity
- iTF_00813715;
- 80% Identity
- -