Lory007699.1
Basic Information
- Insect
- Latheticus oryzae
- Gene Symbol
- tfip11
- Assembly
- GCA_030157265.1
- Location
- CM058052.1:7573713-7576765[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-100 4.5e-96 321.6 12.7 2 275 400 670 399 670 0.98 2 2 0.14 8e+02 -0.7 0.1 242 269 682 709 674 717 0.57
Sequence Information
- Coding Sequence
- atgtcagaagatgaaatggaaaaattcgAGATCACCGACTACGATATAAACAATGAGTTTTATCGTGGtagaaaaaagttaacaaaacaTCAACAAATTTATGGTATATGGGCGGACGACAGTGATAATGACGAAGATGAAAGACCATCTTTCAAATCACATAAACCAAAGAACTACTCAGCGCCCATAGGTTTCGTGGCCGGAGGCGTCCAACAAGCCGgtaaaaaagataaagaaaaagaagtcaaagaagaagaagaaagtgACGATGAACAGCCAACAACGtcttttaaaacaaaagacaGTTCAGAATCAGAAGAAGATCTGCCAAGGAGGGGTAAGCTGCTTATAATTAGTATAATTCAAGGTTATTCAAAACTTTTAGGGTTTGGAGGCGCTTCGGTTAGCGAAACAAAAGGGGAAATTGCAGGTttacgaaacaaaaaaaataattccaatGCTAGCTTAGGAGGAGTGGGAAATTGGGAGAGACATACAAAGGGGATAGGAGCTAAACTTTTATTGCAAATGGGGTATCAGCCAGGAAAGGGGTTAGGAAAAGACTTACAGGGAATTGCAACGCCTGTTGAGGCTCATTTAAGGAAAGGTCGAGGAGCTATCGGTGCATATGGTCCAGAAAAAGCTGCTAGCATCCcaaaaacaaaaGAAATCAAAGAAGAAATAGATGATGGAGATAAAACTGATCACAAATGGAAAAAAGGCGATATGTCTAAGAAAAAGTCTCGTTATTATTACCGCAGTGTTGATGATGTCATAGAAAAGGGTAAAAGACCGGGAGCTTACAGGGGACTAGGAACTAGTAGTGAATTGAGTAAAGTTAAAGTTATCGATATGACGGGCCCTCAACAAAGAGTTTTAAGCGGTTATCATGCATTAAGTGGTTTAAAGGCTCCTCCCGGTGTCGAACATTTTGAAGACGTTGTCcataaaaaatgttctaaTTTTACTCTTCCAGAAATACAGCATAATTTGGATGTTTTGGTAGATATGTGTGAACAGgatATAATTCGAATTGATCGTAATACTCGACATAATCAGGATAGAAtcgtttctttaaaaaatgaacaagaaactttgaagaatttagttaaaaaagaGGGTGATCTTGttgataatttgaaaagtGTTATTCAGATTGTTGATAAGTTGTTGGATCCATCATTGGGATTGTCATTGCTTCAGGTTGCTCAAATTTTTGACACCTTACAGGAAAACCATTATGAAGAGTTTATAAGATATGAGTTGGGTGAGCTAGCGCCTGGTTTGGTTGGTCCGTTGTTGACTTCAGCTCTGGCCAGTTGGTCACCTTTGACCAATCCGAGACAATATGTTGATGTTTTTAGTCGATGGAAGGATATTCTGGACAAGCCCAGACAACGTGGGACACTAGAAGGTAATAATATGGGAATACAGCCATATGATAGTCTCTTATGGCACACTTGGATGCCTGTAATGCGAATTTGTGTTAGTGATTGGAATCCGAAAGATTGTGATCCGATGATAACTTTGATTGAAACATGGATGCCGCTATTGCCGCAATGGATCTTAGATAACATCTATGACCAGCTGATTATGCCAAGAATCCAAGGTGAAGTCAATATATGGAATCCATTGACAGATACCATTCCAATACATGTATGGATACATCCGTGGATTCCTCTATTAGATGCCAGGCTTCAAACCATTATTTATCCAAtcattcaagaaaaattaggGGTGGCTTTAACCAATTGGCATCCGTCTGACAAGTCTGCAAAACCTATGTTAAAACCATGGAAAAGAGTACTACCAGATGGCGTGTTTGTCGCTTTTCTCATCAAACATATCGTTCCAAAGTTACAAATGTGTATGCAAAATTTGGTGATAAATCCACATCAGCAGCATTTAGatGCTTGGTATTGGGTTATGGATTGGAGTGATATGTTATCAGTAGGAAATATGACGTTGATTTtagacaaatttttctttcctAGATGGCGACAAACTCTCGCAATGTGGCTAAATCATAATCCCAACTATAATGAAGTTACTGAATGGTATACAGGATGGAAAAATATGCTATCTGAAGAATTATTAGCACAACCATCTATAAAAGaaaatttccaTAATGCTCTTGAAATAATGAACCGAGCTGTTAATATGGGCCAACAACCTGGAGCCAAAGAATCAATATCATATTTAACCAGCATGGAAAACAGCGCCCCTCCACCTCCTCCTCCTCCTAGATTAGACaaTTTCACAGACACTGTGCGTTCTCTATCTAAAATACCTCCGCTTTACAAAGATTTAGTAGCAAAAAGATGTGAAGAACGTGGTATTTTGTTTGTTCCCATTCCAAATAAGTATTACGAAGCTAAGCAAGTTTATAGGATAGGATCCAATGGTCTCCAATGTTATATCGATAGAAATGTAGTGTTTTCATCTCAGAATAATTCAAATTGGGTTCCTACTTCTCTAAACAGACTTTTAGATATGGCTTAG
- Protein Sequence
- MSEDEMEKFEITDYDINNEFYRGRKKLTKHQQIYGIWADDSDNDEDERPSFKSHKPKNYSAPIGFVAGGVQQAGKKDKEKEVKEEEESDDEQPTTSFKTKDSSESEEDLPRRGKLLIISIIQGYSKLLGFGGASVSETKGEIAGLRNKKNNSNASLGGVGNWERHTKGIGAKLLLQMGYQPGKGLGKDLQGIATPVEAHLRKGRGAIGAYGPEKAASIPKTKEIKEEIDDGDKTDHKWKKGDMSKKKSRYYYRSVDDVIEKGKRPGAYRGLGTSSELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHFEDVVHKKCSNFTLPEIQHNLDVLVDMCEQDIIRIDRNTRHNQDRIVSLKNEQETLKNLVKKEGDLVDNLKSVIQIVDKLLDPSLGLSLLQVAQIFDTLQENHYEEFIRYELGELAPGLVGPLLTSALASWSPLTNPRQYVDVFSRWKDILDKPRQRGTLEGNNMGIQPYDSLLWHTWMPVMRICVSDWNPKDCDPMITLIETWMPLLPQWILDNIYDQLIMPRIQGEVNIWNPLTDTIPIHVWIHPWIPLLDARLQTIIYPIIQEKLGVALTNWHPSDKSAKPMLKPWKRVLPDGVFVAFLIKHIVPKLQMCMQNLVINPHQQHLDAWYWVMDWSDMLSVGNMTLILDKFFFPRWRQTLAMWLNHNPNYNEVTEWYTGWKNMLSEELLAQPSIKENFHNALEIMNRAVNMGQQPGAKESISYLTSMENSAPPPPPPPRLDNFTDTVRSLSKIPPLYKDLVAKRCEERGILFVPIPNKYYEAKQVYRIGSNGLQCYIDRNVVFSSQNNSNWVPTSLNRLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00167649; iTF_00752964; iTF_00752963; iTF_00415110; iTF_01409994; iTF_01480115; iTF_01480883; iTF_00639543; iTF_01567901;
- 90% Identity
- -
- 80% Identity
- -