Eagr016725.1
Basic Information
- Insect
- Eledona agricola
- Gene Symbol
- tfip11
- Assembly
- GCA_964023215.1
- Location
- OZ026860.1:13897638-13903412[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-97 2.8e-93 312.8 12.2 2 275 269 539 268 539 0.98 2 2 0.11 8.3e+02 -0.3 0.1 241 269 550 578 542 584 0.69
Sequence Information
- Coding Sequence
- ATGATTACAGGATTTGGGGGTGTGAGTGGCGATATCGCGGGTTTGCGAACCAAGAGCGGTAAATCTGGGAGTAATATACACGGAGTGGGCAATTGGGAGAAACACACAAAAGGCATCGGGGCCAAATTGTTGTTGCAAATGGGCTACAAACCCGGAAAGGGTCTAGGTAAAGACTTGCAGGGTATTTCGGCGCCTGTGGAAGCACACCTACGCAAGGGACGTGGCGCAATTGGCGCATACGGACCAGAAAAAGCCGCTTCAGTGCCTAAGAAACAGGAGTTCAAAGAGGAGATCGATGACGAGGACAAGGACAGCCACAAATGGCGGAAAAGCGATATGACAAAAAAGAAAACTCGCTACTACTACCGCAGCGTGGATGATGTGATAGAAAAAGGCAAACGGACGGCTTCGTTCGGCGGTTCGTCCATCAGCGAACTGTCCAAAGTGAAAGTGATCGACATGACTGGTCCCCAGCAGAGAGTTCTGAGCGGTTATCACGCTTTAAGCGGACTGAAAGCACCGCCGGGCGTCGAACACTTTGAAGATGTCGTCCATAAGAAGTGCTCCAACTTTGCCCTGCCGGAAATCCAACACAACCTCGACGTTTTGGTCGACATTTGCGAACAGAATATTATTCGTATAGATAGGAGCACCAGACAAAATCACGACAAACTTGTGAGTTTGAAGCAGGAGAAAGAGACGTTGACGAATTTGCTCCACAAAGAAGAGGACCTTGTTGAAAATTTGAAAGACGTGATGGAGATTGTGGATAAGTTGTTGGATCCGTCGTTGGGGCTCAGTTTGCTGCAGGTGgccaaaatattcaacaatttGCAAGATAACCACTACGAAGAGTTTGTAAGATACGAGTTGGGCGAACTGGCGCCGGGTTTAGTGGGTCCGTTGTTGACATCAGCGCTCGCCAGTTGGTCCCCACTGACCAATCCCAAACAGTACATGGATGTGTTTGGTCGTTGGAAGGAGATCTTGGACAAGCCCAAACAACGTGGGACACTAGAAGGTAATAATATGGGAATTCAGCCATATGATAGTCTCTTATGGCACACTTGGATGCCTGTAATGCGAATTTGTGTTAGCGCATGGAACCCCAAGGATTGCGATCCGATGATTACTCTAATCGAGACTTGGACGCCGCTGTTGCCTCAGTGGATTTTGGACAATCTGTATGATCAACTGATAATCCCACGAATCCAGTCGGAGGTCAATATTTGGAACCCGGTCGCAGACACAATACCCATACATGTATGGATCCACCCTTGGATTCCGCTACTGGACACCCGACTACAATCTGTAATATATCCGATCATCCAGGACAAATTAGGAACGGCTCTGACCAACTGGCACCCATCAGACAAGTCGGCTAAACCCATGCTGAAGCCGTGGCAGAGAGTACTTCCGGATGGGGTTTTTGTCGCTTTCCTCATCAAACACATTGTACCCAAACTTCAAATGTGCATGCAGAATCTTGTTATAAATCCGCACCAACAGCATTTGGATGCTTGGTACTGGGTCATGGATTGGGGGGACATGTTGTCCATGGGCAATATGACTCTGATTTTGGACAAGTTCTTCTTTCCGAGGTGGCGCCAAACATTGGCTATGTGGCTCAACCACAACCCCAATTATACTGAAGTCACCGAATGGTACACGGGCTGGAAGAGGATGCTATCCGATGAGTTGCTAGCCCAGCCGACCATCAAAGAAAATTTCCACAACGCGCTTGAAATTATGAACAGGGCGGTCAATATGGGACAGCAACCCGGCGCCAAAGAGTCCATATCGTACTTGAGCAGCATGGAACATACCGTCCCGCCCCCGCCACCACCGCCTCGAGTAAACAGCTTTGCCGAAACTGTTCGTTCCACATCGAAAATTCCTCCGTTGTACAAGGATTTGGTGGCGAAGCGGTGTGAGGAGCGCGGGATTTTATTCGTACCCATTCCTAACAAGTACTACGAGGCGAAACAGGTGTACAGGATAGGTTCGAACGGGGTGCAGTGCTACATCGACAGGAACGTCGTGTTCTCATCCCACAACAATTGCAACTGGGTCCCTACCTCTCTCAACCGACTCTTGGACATGGCTTAA
- Protein Sequence
- MITGFGGVSGDIAGLRTKSGKSGSNIHGVGNWEKHTKGIGAKLLLQMGYKPGKGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKAASVPKKQEFKEEIDDEDKDSHKWRKSDMTKKKTRYYYRSVDDVIEKGKRTASFGGSSISELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHFEDVVHKKCSNFALPEIQHNLDVLVDICEQNIIRIDRSTRQNHDKLVSLKQEKETLTNLLHKEEDLVENLKDVMEIVDKLLDPSLGLSLLQVAKIFNNLQDNHYEEFVRYELGELAPGLVGPLLTSALASWSPLTNPKQYMDVFGRWKEILDKPKQRGTLEGNNMGIQPYDSLLWHTWMPVMRICVSAWNPKDCDPMITLIETWTPLLPQWILDNLYDQLIIPRIQSEVNIWNPVADTIPIHVWIHPWIPLLDTRLQSVIYPIIQDKLGTALTNWHPSDKSAKPMLKPWQRVLPDGVFVAFLIKHIVPKLQMCMQNLVINPHQQHLDAWYWVMDWGDMLSMGNMTLILDKFFFPRWRQTLAMWLNHNPNYTEVTEWYTGWKRMLSDELLAQPTIKENFHNALEIMNRAVNMGQQPGAKESISYLSSMEHTVPPPPPPPRVNSFAETVRSTSKIPPLYKDLVAKRCEERGILFVPIPNKYYEAKQVYRIGSNGVQCYIDRNVVFSSHNNCNWVPTSLNRLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00870574;
- 90% Identity
- -
- 80% Identity
- -