Gcor019525.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Gnatocerus cornutus
Gene Symbol
tfip11
Assembly
GCA_029298725.1
Location
JARHXT010000016.1:1266076-1269102[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.3e-98 3.3e-94 315.9 13.4 2 275 387 657 386 657 0.98
2 2 0.12 9.2e+02 -0.4 0.2 241 269 668 696 660 702 0.69

Sequence Information

Coding Sequence
atgtCGGACGATGAAATGGAAAAGTTCGAGATTACGGATTACGATCTAAACAATGAGTTTTATCGCAGTAgaaaaaagttaacaaaacaaCAACAGATTTATGGTGTATGGGCAGACGACAGTGATAATGAAGATGAAAGACCGTCCTTTAATTCTCGAAAACCGAAAAACTACAGCGCCCCCATTGGGTTTGTGGCTGGGGGGGTACAGCAAGCGGGGAAGAAACAGGAGAAGAAAGAGGAGAGTGATGACGAGCAACCGACTACGTCGTTTAAAGTGAGGGATAGTTCTAGTGAATCCGAAGAAGAACGCCCCAGGACAGGTAATAGTAGCCCCCTTGGAGCCTCACTTGACTCTCTCGTAGGTTTCGGAGGAGTCGCTGAAGGAGACATCGCTGGTATGCGCAATAAGAACAACAAATCCAACTCAAATCTGGGGGGTTTGGGCAACTGGGAGAAAAACACAAAAGGAATTGGGGCCAAACTCCTACTTCAAATGGGGTTCCAACCAGGGAAGGGCCTAGGGAAAGACTTGCAGGGGATCACAGCCCCTGTTGAAGCACACTTGCGTAAGGGGAGAGGGGCTATCGGCGCGTACGGCCCTGAGAAATCGGCGAAAGTCCCTCAGAAAAAAGAAATCAAAGAAGAGTTTGAAGAAGACGAGAAATCCGACCACAAATGGAAAAAAGGCGACAAGAAAAAAACTCGCTACTACTACCGTAGTGTCGACGACGTCATTGAAAAGGGCAAACGACCCGGAGCCTTCCGAAACTTGGGCTCCGCCAGCGAACTAAGCAAAGTCAAAGTCATAGACATGACGGGGCCCCAACAACGAGTCTTGAGCGGTTACCACGCTTTAAGCGGGCTGAAAGCTCCGCCAGGAGTCGAACACTTTGAGGACGTGGTCCACAAAAAGTGCTCGAATTTCGCTTTGCCTGAAATCCAACACAATCTCGACGTTTTGGTGGACATGTGCGAACAAGATATTATTCGAATTGACAGAAATACGAGACATAATCAGGATAGAATAGTGGCGCTGAAGAACGAACATGAAAACTTGAAAAGTTTAGTCAAGAAAGAGGACGATCTTGTTAATAATTTGAGGAGTGTGATTGAGATTGTTGATAAGTTGTTAGATCCATCTTTGGGGTTGTCATTGCTTCAAGTtgcccaaatttttgacaatttgcaGgaCAACCACTACGAAGAGTTCGTTCGTTACGAGCTGGGAGAGCTGGCGCCGGGTTTAGTGGGGCCCTTATTGACATCGGCTCTGGCCAGTTGGTCTCCTTTGGCTAACCCGAAACAATATATCGACGTATTTAGTCGTTGGAAGGACATTCTGGACAAGCCCAGACAACGTGGGACACTAGAAGGTAATAATATGGGAATTCAGCCATATGATAGTCTCTTATGGCACACTTGGATGCCTGTAATGCGAATTTGTGTTAGTGCGTGGAATCCGAAAGATTGCGATCCTCTCATTACTCTAATTGAGACGTGGATGGCGTTGTTACCACAGTGGATCTTGGACAACATTTACGACCAACTGATCATGCCGAGAATACAAGCAGAAGTTAACATTTGGAATCCTTTGACGGATACCATCCCGATACACGTCTGGATACACCCATGGATACCATTACTCAACGCGAGACTCCAAGCGATCATTTATCCCATAATCCAAGAGAAACTGGGGGCGGCATTAACAAACTGGCACCCGTCAGACAAATCTGCAAAGCCGATGTTAAAGCCGTGGCAAAGAGTCCTACCAGATGGTGTCTTTGTCGCTTTTCTCATCAAGCACATTGTTCCGAAACTCCAACTCTGCATGCAGAATTTGGTGATAAATCCGCACCAACAGCACTTGGATGCGTGGTATTGGGTGATGGACTGGAGCGACATGGTGTCGGTGGGTAACATGACTCTGATTCTCGACAAGTTCTTCTTCCCTCGATGGCGACAGACTCTGGCGATGTGGCTGAACCACAACCCCAATTATAACGAAGTCACCGAATGGTACACGGGGTGGAAAAGCATGTTATCTGAAGAACTCCTCGCACAACCTACAATCAAGGAAAATTTCCACAACGCTCTGGAAATTATGAATAGAGCCGTGAACATGGGCCAACAACCAGGAGCGAAAGAATCGATTTCCTACTTGAGCAGCATGGAGAACGACTTGCCGCCGCCACCGCCCCCGAGGATAGACAATTTCGCAGAGACTGTGCGAGCAGCATCCAAAATCCCTCCTCTGTATAAAGACCTGGTGGCAAAGAGGTGTGAAGAAAGGGGTATTTTATTCGTCCCGATTCCAAACAAGTATTATGAGGCGAAACAAGTCTACAGGATAGGTTCCAACGGGCTTCAATGCTACATTGACCGGAATGTCGTGTTTTCCTCACAAAACAACTCAAATTGGGTTCCTACCTCTCTAAACAGACTCTTAGATATGGcttaa
Protein Sequence
MSDDEMEKFEITDYDLNNEFYRSRKKLTKQQQIYGVWADDSDNEDERPSFNSRKPKNYSAPIGFVAGGVQQAGKKQEKKEESDDEQPTTSFKVRDSSSESEEERPRTGNSSPLGASLDSLVGFGGVAEGDIAGMRNKNNKSNSNLGGLGNWEKNTKGIGAKLLLQMGFQPGKGLGKDLQGITAPVEAHLRKGRGAIGAYGPEKSAKVPQKKEIKEEFEEDEKSDHKWKKGDKKKTRYYYRSVDDVIEKGKRPGAFRNLGSASELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHFEDVVHKKCSNFALPEIQHNLDVLVDMCEQDIIRIDRNTRHNQDRIVALKNEHENLKSLVKKEDDLVNNLRSVIEIVDKLLDPSLGLSLLQVAQIFDNLQDNHYEEFVRYELGELAPGLVGPLLTSALASWSPLANPKQYIDVFSRWKDILDKPRQRGTLEGNNMGIQPYDSLLWHTWMPVMRICVSAWNPKDCDPLITLIETWMALLPQWILDNIYDQLIMPRIQAEVNIWNPLTDTIPIHVWIHPWIPLLNARLQAIIYPIIQEKLGAALTNWHPSDKSAKPMLKPWQRVLPDGVFVAFLIKHIVPKLQLCMQNLVINPHQQHLDAWYWVMDWSDMVSVGNMTLILDKFFFPRWRQTLAMWLNHNPNYNEVTEWYTGWKSMLSEELLAQPTIKENFHNALEIMNRAVNMGQQPGAKESISYLSSMENDLPPPPPPRIDNFAETVRAASKIPPLYKDLVAKRCEERGILFVPIPNKYYEAKQVYRIGSNGLQCYIDRNVVFSSQNNSNWVPTSLNRLLDMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00870574;
90% Identity
iTF_00752964;
80% Identity
iTF_00752964;