Cang013245.1
Basic Information
- Insect
- Cynaeus angustus
- Gene Symbol
- tfip11
- Assembly
- GCA_030157275.1
- Location
- CM058063.1:21990639-21993855[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2e-99 1e-94 317.5 12.4 2 275 393 663 392 663 0.98 2 2 0.08 9e+02 -0.4 0.2 241 269 674 702 666 708 0.69
Sequence Information
- Coding Sequence
- atgtcggACGATGAAATGGAAAAGTTTGAGATAACGGACTACGATctaaacaatgaattttaccgtggtagaaaaaagttaacaaaacaTCAACAGATTTATGGTGTATGGGCAGACGACAGTGATAATGAAGACGAAAGACCGTCCTTCAACTCccgaaaacctaaaaactacaCAGCTCCCATTGGATTCGTCGCTGGGGGCGTACAACAAGCGGGAAagaaaactgagaatgaagaaaaaaaggagGACAGCGATGACGAGAAACCGACGACGTCGTTTAAAGTTAGAGATAGTTCTAGCGAGTCTGAGGAAGAACGCCCTAGGACAGGTAACACTAGGAGTAGTATTAGCcccaattatttagattttgtaggGTTTGGAGGAGTCTCTGAAGGAGAGATCGCAGGTTTGCGCAATAAGAATATGAGACCCAGCACAACTTTGGGAGGGTTGGGAAACTGGGAGAAAAACACGAAAGGAATCGGTGCTAAACTTTTGTTACAAATGGGTTTTCAACCAGGGAGAGGGTTAGGGAAAGATTTGCAAGGGATCACGGCACCCGTTGAGGCACATCTACGCAAAGGGAGAGGAGCTATAGGGGCTTACGGCCCTGAAAAACCCGCTACACTCCCCAAgaaaaaagAAATTAAAGAAGAGTTTCACGATGAAGAGAAATCCGATCATAAATGGAAAAAAGGCGACATGACTAAGAAAAAAACCCGCTACTACTACCGCAGTGTCGACGACGTCATTGAAAAGGGCAAACGACCGGGAGCCTTCCGCAACTTAGGCTCTGCCAGTGAACTAAGCAAAGTCAAAGTCATAGACATGACGGGGCCCCAACAAAGAGTCTTGAGCGGCTATCACGCTTTAAGTGGGCTCAAAGCGCCACCAGGAGTTGAACATTTTGAGGACGTGGTCCATAAAAAATGCTCAAATTTTGCCCTTCCTGAAATCCAACACAATTTGGACGTTTTGGTGGATATGTGTGAACAAGATATCATAAGAATTGACAGAAACACGAGACATAATCAAGATAGAGTTGTGGCGCTCAGGAATgaacaagaaaatttgaaaagtttagtCAAGAAAGAAGATGAACTTGTTAATAATTTGAGGAGTGTGATTGAGATTGTTGATAAGTTGTTAGATCCATCTTTGGGGTTGTCATTGCTTCAAGTTGcccaaatttttgacaatttgcaGGACAACCACTATGAAGAATTCGTCCGCTACGAGTTGGGAGAATTAGCGCCCGGTTTAGTGGGTCCACTATTGACATCAGCCCTAGCTAGTTGGTCGCCGTTAACTAGCCCAAAACAATATATCGATGTGTTTAGTCGTTGGAAGGACATTCTGGACAAGCCCAGACAACGTGGGACACTAGAAGGTAATAATATGGGAATTCAGCCATATGATAGTCTCTTATGGCACACTTGGATGCCTGTAATGCGAATTTGTGTTAGTACCTGGAATCCGAAAGATTGTGATCCTCTGATTACGTTGGTTGAGACATGGATGCCGTTATTACCACAGTGGATCTTGGACAACATTTACGACCAACTGATCATGCCCAGAATCCAAGGAGAGGTTAACATATGGAATCCATTGACAGATACCATCCCGATACACGTATGGATACATCCATGGATACCATTGCTGGACGCTAGACTCCAAGCCATCATTTATCCAATCATTCAAGAGAAACTGGGAGCGGCACTGACAAACTGGCACCCGTCAGACAAGTCAGCTAAACCCATGTTGAAACCATGGCAAAGGGTCCTACCAGACGGTGTTTTCGTCGCTTTTCTCATAAAGCATATTGTACCAAAACTCCAACTCTGTATGCAGAATCTGGTCATAAATCCGCATCAGCAACATTTAGATGCATGGTACTGGGTGATGGACTGGAGCGACATGTTATCAGTAGGAAACATGACACTTATTCTGGACAAGTTTTTCTTTCCACGATGGCGTCAAACTCTCGCCATGTGGCTGAACCACAACCCTAATTATAACGAAGTCACAGAATGGTACACGGGCTGGAAAAGCATGTTATCTGAAGAGCTACTCGCCCAACCTACcatcaaagaaaatttccaTAACGCTTTGGAAATCATGAACAGGGCCGTGAACATGGGACAACAACCTGGAGCGAAAGAATCGATATCGTACTTGAGCAGCATGGAGAATGACgtgccgccgccgccgcctccaAGGATAGATaatttcgcgGAGACGGTACGTtcaatatcgaaaatacctcCTTTATATAAAGATCTAGTGGCAAAGAGGTGCGAAGAAAGAGGTATCCTTTTTGTCCCGATTCCAAACAAGTATTATGAGGCGAAACAAGTATACAGGATAGGTTCTAATGGGCTTCAGTGCTACATTGACAGGAATGTGGTGTTTTCGTCGCAGAACAACTCAAATTGGGTTCCTACCTCTCTAAACAGACTCTTAGATATggcttaa
- Protein Sequence
- MSDDEMEKFEITDYDLNNEFYRGRKKLTKHQQIYGVWADDSDNEDERPSFNSRKPKNYTAPIGFVAGGVQQAGKKTENEEKKEDSDDEKPTTSFKVRDSSSESEEERPRTGNTRSSISPNYLDFVGFGGVSEGEIAGLRNKNMRPSTTLGGLGNWEKNTKGIGAKLLLQMGFQPGRGLGKDLQGITAPVEAHLRKGRGAIGAYGPEKPATLPKKKEIKEEFHDEEKSDHKWKKGDMTKKKTRYYYRSVDDVIEKGKRPGAFRNLGSASELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHFEDVVHKKCSNFALPEIQHNLDVLVDMCEQDIIRIDRNTRHNQDRVVALRNEQENLKSLVKKEDELVNNLRSVIEIVDKLLDPSLGLSLLQVAQIFDNLQDNHYEEFVRYELGELAPGLVGPLLTSALASWSPLTSPKQYIDVFSRWKDILDKPRQRGTLEGNNMGIQPYDSLLWHTWMPVMRICVSTWNPKDCDPLITLVETWMPLLPQWILDNIYDQLIMPRIQGEVNIWNPLTDTIPIHVWIHPWIPLLDARLQAIIYPIIQEKLGAALTNWHPSDKSAKPMLKPWQRVLPDGVFVAFLIKHIVPKLQLCMQNLVINPHQQHLDAWYWVMDWSDMLSVGNMTLILDKFFFPRWRQTLAMWLNHNPNYNEVTEWYTGWKSMLSEELLAQPTIKENFHNALEIMNRAVNMGQQPGAKESISYLSSMENDVPPPPPPRIDNFAETVRSISKIPPLYKDLVAKRCEERGILFVPIPNKYYEAKQVYRIGSNGLQCYIDRNVVFSSQNNSNWVPTSLNRLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00870574;
- 90% Identity
- iTF_00752964;
- 80% Identity
- -