Tmad007107.1
Basic Information
- Insect
- Tribolium madens
- Gene Symbol
- tfip11
- Assembly
- GCA_015345945.1
- Location
- JADDYM010000020.1:9859253-9862298[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-97 2.2e-93 312.8 14.7 2 275 392 662 391 662 0.98 2 2 0.19 1.6e+03 -1.6 0.0 242 268 674 700 666 706 0.72
Sequence Information
- Coding Sequence
- ATGTCGGACGACGAGATGGAAAAGTTCGAGATAACGGATTACGATTTAAACAATGAGTTTTACCGTGGTAGAAAAAAGTTAAGCAAACACCAGCAGATTTATGGTATATGGGCAGACGACAGTGATAATGACGAAGACGAGAGACCTTCGTTTAAGTCACGAAAACCTAAGAATTACTCCGCCCCTATTGGTTTTGTTGCTGGGGGTGTCCAACAAGCGGGCAAAAAAACCGACCATGTTAAGAAGGAAGAAGAAAGTGATGATGAAAAACCAACTACTTCCTTTAAACTGAAGGATAGTTCAAGTGACTCAGAGGATGAACGCCCTAGGCCAGGTAGAGTCAAAGAATACCAAACTTGTGACGAAAATACTATTTCAGGGTTTGGTGGTGCACAAGAAAGTGGGGAAATTGCAGGTTTAAGAAATAAAACTAGCGCGCAAACAATGCAAGGGATGGGAAATTGGGAGAAACACACAAAAGGGATTGGGGCAAAGCTTCTCTTACAGATGGGTTTTCAACCGGGGAAAGGTCTCGGAAAAGATTTACAAGGTATCGCAGCCCCGGTTGAGGCCCACTTGAGAAAGGGCAGAGGGGCGATAGGCGCATATGGCCCTGAAAAGGCGGCAAGCATTCCAAAGAAAAAAGAAATCAAGGAAGAAATTGAAGATGAAAACACCGATCACAAGTGGAAGAAAAATGACATGTCTAAGAAAAAAACGCGTTATTATTATCGTAGCGTAGATGATGTGATAGAAAAAGGCAAGAGGCCAGGGGCTTTTAGAAACATGGGTTTTGGAAGTGAATTAAGCAAAGTCAAAGTCATTGATATGACGGGGCCCCAACAGAGGGTTCTGAGCGGGTATCACGCACTAAGTGGACTCAAAGCACCCCCAGGGGTTGAACATTTTGAAGATGTTGTACATAAAAAATGTTCAAACTTTACTTTACCTGAAATACAACACAATCTGGATGTTTTAGTTGATATCTGTGAACAGGATATTATTAGAATAGATAGAAATACAAGGTTTAATCAGGATAAAATTGTTGCACTCAGACAGGAACAAGAAACTTTGAAAAATCAAGTACAAAGAGAGAGTGAAGTTGTTGATAATTTAAAAGATGTTATTGAAATAGTGGACAAGTTGTTAAATCCCGATTTGGGGCTGTCCTTGCTTCAAGTAGCACAAATTTTCAATAATTTATTGGAAAACCATTATGAAGAGTTTGTGAGGTACGAATTAGGTGAATTGGCCCCTGGTTTAGTAGGTCCTCTTTTGACATCAGCCCTCGCCAGTTGGTCGCCATTGACCAATCCCAAGCAATACAAGGAAATTTTTGCCCGTTGGAAGGACATTCTGGAGAAGCCCAGACAACGTGGGACACTAGAAGGTAATAATATGGGAATTCAGCCATATGATAGTCTCTTATGGCACACTTGGATGCCTGTAATGCGAATTTGTGTTAGTTCGTGGAATCCCAAGGATTGTGATCCTTTGATAACACTGATTGAAACCTGGATGCCGTTATTGCCGCAGTGGATATTGGACAACATTTACGACCAACTTATCATGCCTAGAATCCAGGCTGAAGTCAATATCTGGAATCCCTTGACAGACACAATCCCAATTCATGTCTGGATACATCCTTGGATACCTTTACTCGATACCAGACTTCAAGCTATTATTTATCCAATCATTCAAGAGAAACTAGGAGTGGCTTTAACAAACTGGCACCCTTCGGATAAATCAGCTAAACCCATGTTAAAACCATGGCAAAGAGTTTTGCCAGATGGCGTTTTCGTCGCATTCCTTCTCAAACACATTGTACCGAAATTACAGCTTTGTATGCAAAATTTAGTTATAAATCCACATCAACAACATTTAGACGCGTGGTATTGGGTTATGGATTGGAGCGATATGTTATCAGTGGGGAATATGACGTTAATTCTGGATAAGTTTTTCTTCCCAAGATGGCGGCAAACTCTAGCCATGTGGTTGAACCACAACCCGAATTATGCCGAAGTCACTGATTGGTACACGGGGTGGAAACATATGTTGTCAGACGAGTTATTAGCACAACCGACCATTAAAGAAAATTTCCATACAGCTCTTGAGATTATGAACCGAGCGGTGAATATCGGCCAACAACCAGGGGCCAAAGAATCGATCTCGTATTTGAGTATGGAAAATAACGCACCGCCACCTCCGCCACCACCTCGAGTTGAAAGTTTTGCTGAAACTGTAAGGTCCGCTTCGAAAATACCTCCACTTTACAAAGATTTAGTCGCGAAAAGATGCGAAGAACGTGGTATTTTGTTTGTCCCTATCCCAAACAAATATTACGAGGCTAAACAAGTATACAGGATAGGGTCCAACGGACTTCAATGTTACATCGACAGAAATGTCGTTTTCTCGTCACAAAATAACACTAACTGGGTTCCCACCTCTTTAAACCGACTATTAGACATGGCATAA
- Protein Sequence
- MSDDEMEKFEITDYDLNNEFYRGRKKLSKHQQIYGIWADDSDNDEDERPSFKSRKPKNYSAPIGFVAGGVQQAGKKTDHVKKEEESDDEKPTTSFKLKDSSSDSEDERPRPGRVKEYQTCDENTISGFGGAQESGEIAGLRNKTSAQTMQGMGNWEKHTKGIGAKLLLQMGFQPGKGLGKDLQGIAAPVEAHLRKGRGAIGAYGPEKAASIPKKKEIKEEIEDENTDHKWKKNDMSKKKTRYYYRSVDDVIEKGKRPGAFRNMGFGSELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHFEDVVHKKCSNFTLPEIQHNLDVLVDICEQDIIRIDRNTRFNQDKIVALRQEQETLKNQVQRESEVVDNLKDVIEIVDKLLNPDLGLSLLQVAQIFNNLLENHYEEFVRYELGELAPGLVGPLLTSALASWSPLTNPKQYKEIFARWKDILEKPRQRGTLEGNNMGIQPYDSLLWHTWMPVMRICVSSWNPKDCDPLITLIETWMPLLPQWILDNIYDQLIMPRIQAEVNIWNPLTDTIPIHVWIHPWIPLLDTRLQAIIYPIIQEKLGVALTNWHPSDKSAKPMLKPWQRVLPDGVFVAFLLKHIVPKLQLCMQNLVINPHQQHLDAWYWVMDWSDMLSVGNMTLILDKFFFPRWRQTLAMWLNHNPNYAEVTDWYTGWKHMLSDELLAQPTIKENFHTALEIMNRAVNIGQQPGAKESISYLSMENNAPPPPPPPRVESFAETVRSASKIPPLYKDLVAKRCEERGILFVPIPNKYYEAKQVYRIGSNGLQCYIDRNVVFSSQNNTNWVPTSLNRLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00870574;
- 90% Identity
- iTF_01480115;
- 80% Identity
- -