Aver011962.1
Basic Information
- Insect
- Asbolus verrucosus
- Gene Symbol
- tfip11
- Assembly
- GCA_004193795.1
- Location
- QDEB01109526.1:16626-19773[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3e-96 6.1e-92 307.8 14.2 12 275 394 654 378 654 0.97 2 2 0.12 9e+02 -1.0 0.0 242 269 666 693 658 699 0.62
Sequence Information
- Coding Sequence
- atgtctgacgatgaaatggaaaaattcgaGATAACGGATTACGATTTAAACAACGAATTTTATCGtgGTATATGGGCTGATGACAGCGATAATGAAGCAGACGAAAGACCATCATTCAAGTCGAGAAAACCAAAAAGTTACACAGCTCCGATTGGTTTTGTTGCTGGTGGTGTGCAACAAGCTGGCAAAAACAACGACAAAGCTGTCACCAAGAAAGAGGAAAGTGGCAGCGACGATGAGAGGCCCACGACTTcgtttaaaagcaaaaatagcTCCAGTGAGTCCGACGAAGAACTCCCCAGGCCAGGATTTGGAGGCGCCCAGTCCACCGTCACTGAAATCACTGGTGACATAGCTGGGCTAcgcaacaaaacaaacaaatctgGAAGTAATTTGAAAGGCATGGGTAACTGGGAAAGGCACACAAAAGGAATTGGCGCCAAACTTCTCCTACAGATGGGATTCCAACCAGGAAGAGGTTTGGGTAAAGATTTACAGGGAATTTCAGCTCCCGTTGAAGCCCATCAGAGGAAGGGGAGGGGAGCTATAGGAGCCTATGGTCCCGAAAAACCAGCAACCATCCCAAAGAAAAAGgacATCAaggaagaaattgaagaagaagACAAAAACGATCACAAATGGAAAAAGAGCGACATGGCCCAGAAGAAAACGCGCTACTATTATAGAAGTGTCGATGATGTTATTGAAAAGGGGAAAAGACCGGGGGCTTTCCGCGGTTTGGGAGCTGCAAGTGAACTGAGTAAAGTCAAAGTAATTGACATGACTGGCCCTCAACAGAGGGTTTTGAGCGGTTACCACGCGCTAAGCGGCCTCAAAGCGCCCCCAGGAGTTGAGCACTTTGAAGATGTGGTCCATAAAAagtgttcaaattttacactCCCAGAAATCCAACacaatttggatattttagtCGACATGTGTGAACAGGACATAATTCGCATAGACAGAAATACCAGGCACAATCAAGACAGAATTGTGGGTCTTAAGCAGGAACAGgaagctttgaaaaatttggtgCAAAAAGAAGACGAGCTTATTGACAATTTAAGGAATGTTATAGACATAGttgataaattgttaaatccATCTCTGGGATTATCTCTCCTACAAGTTGcccaaattttcaacaatttgcaGAGTAACAGCAAAAGTATATTTCAGGAAAACCATTATGAAGAGTTTGTAAGGTATGAGTTGGGTGAGCTGGCGCCAGGTTTAGTGGGACCACTGTTGACTTCGGCCCTTGCCAGCTGGTCGCCCTTGACCAATCCCAAGCAATATATGGATGTATTTGACCGTTGGAAGGACATTCTGGACAAGCCCAGACAACGTGGGACACTAGAAGGTAATAATATGGGAATTCAGCCATATGATAGTCTCTTATGGCACACTTGGATGCCTGTAATGCGAATTTGTGTTAGTACCTGGAATCCGAAAGATTGTGATCCTATGATAAACTTGATTGAAACTTGGATGCCCTCGTTGCCACAGTGGATTCTAGACAATATTTACGACCAACTTATAATGCCTAGAATACAAGCCGAAGTTAATGTCTGGAATCCATTGACAGACACCATTCCAATACATGTCTGGATACATCCATGGATTCCTTTATTGGATACACGACTGCAAGCGATTATTTATCCAATTATTCAGGAAAAATTAGGCGCAGCTTTAACTAATTGGCATCCATCTGATAAATCGGCCAAACCAATGCTGAAACCGTGGCAAAGAGTGCTACCAGATGGCGTTTTCGTCGCTTTTCTCATCAAACATATTGTTCCCAAATTACAGAtttgtatgcaaaatttgGTTATAAACCCGCACCAACAACATTTAGATGCTTGGTACTGGGTCATGGATTGGAGCGACATGTTGTCTGTTGGCAAcatgactttaattttagacaaattCTTCTTCCCTAGATGGCGCCAAACTCTTGCCATGTGGTTGAATCACAATCCTAATTACGCCGAAGTGACTGATTGGTATACAGGgtggaaaaatatgttatctGAAGAATTATTAGCACAACCAACTATTAAAGaAAACTTCCACAACGCATTGGAAATTATGAACAGAGCTGTAAATATTGGACAACAACCTGGAGCTAAAGAATCTATTTCATATCTTACTAGCATGGAAAATAACGCGCCTCCACCACCTCCACCACCACGAGTAGAGAGCTTTGTGGAAACTGTTCGTAGTGTTTCAAAAATCCCACCTTTATACAAAGATCTGGTAGCGAAAAGGTGTGAAGAAAGGGGCATTCTGTTTGTACCCATCCCAAACAAATATTATGAAGCAAAACAAGTATACAGGATAGGAACTAATGGGCTGCAGTGTTATATAGATAGGAATGTGGTATTTTCATCTCACAACAATTCAAACTGGATTCCCACCTCTTTAAATAGACTTTTAGATATGGCTTAA
- Protein Sequence
- MSDDEMEKFEITDYDLNNEFYRGIWADDSDNEADERPSFKSRKPKSYTAPIGFVAGGVQQAGKNNDKAVTKKEESGSDDERPTTSFKSKNSSSESDEELPRPGFGGAQSTVTEITGDIAGLRNKTNKSGSNLKGMGNWERHTKGIGAKLLLQMGFQPGRGLGKDLQGISAPVEAHQRKGRGAIGAYGPEKPATIPKKKDIKEEIEEEDKNDHKWKKSDMAQKKTRYYYRSVDDVIEKGKRPGAFRGLGAASELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHFEDVVHKKCSNFTLPEIQHNLDILVDMCEQDIIRIDRNTRHNQDRIVGLKQEQEALKNLVQKEDELIDNLRNVIDIVDKLLNPSLGLSLLQVAQIFNNLQSNSKSIFQENHYEEFVRYELGELAPGLVGPLLTSALASWSPLTNPKQYMDVFDRWKDILDKPRQRGTLEGNNMGIQPYDSLLWHTWMPVMRICVSTWNPKDCDPMINLIETWMPSLPQWILDNIYDQLIMPRIQAEVNVWNPLTDTIPIHVWIHPWIPLLDTRLQAIIYPIIQEKLGAALTNWHPSDKSAKPMLKPWQRVLPDGVFVAFLIKHIVPKLQICMQNLVINPHQQHLDAWYWVMDWSDMLSVGNMTLILDKFFFPRWRQTLAMWLNHNPNYAEVTDWYTGWKNMLSEELLAQPTIKENFHNALEIMNRAVNIGQQPGAKESISYLTSMENNAPPPPPPPRVESFVETVRSVSKIPPLYKDLVAKRCEERGILFVPIPNKYYEAKQVYRIGTNGLQCYIDRNVVFSSHNNSNWIPTSLNRLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00870574;
- 90% Identity
- -
- 80% Identity
- -