Zmor020906.1
Basic Information
- Insect
- Zophobas morio
- Gene Symbol
- tfip11
- Assembly
- GCA_027724725.1
- Location
- JALNTZ010000003.1:6230772-6233791[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-98 6.3e-94 315.8 13.4 2 275 377 647 376 647 0.98 2 2 0.056 7.7e+02 0.7 0.3 241 272 658 689 649 692 0.73
Sequence Information
- Coding Sequence
- ATGTCGGACGACGAGATGGAGAAGTTCGAAATAACGGATTACGATTTAGACAATGAGTTTTTCCGTGGTAGAAAAAAGTTAACAAAACACCAACAGATCTATGGTGTATGGGCAGACGACAGCGACAATGACGAAGACGAAAGGCCGTCTTTCAAAAGCCGCAAGCCTAAGAACTACTCGGCCCCCATCGGTTTCGTGGCCGGCGGGGTGCAGCAAGCGGGTAAGAAGAAGGAAGAGAAGGAGGCGGAGAGCGACGACGAGAAGCCGACGACGTCGTTCAAGACCAGAGACAGCTCGAGCGACGAGGAGGACAAACCGAGAGCGGGGTTCGGGGCCGTGAGCGAGCCCAGCGGGGAGATAGCGGGGCTGCGCGGCAAAAACAACAAAGGGGGCGCCAGTCTAGGGGTGGGCAACTGGGAGAGACACACAAAAGGCATTGGAGCCAAACTGCTGCTGCAAATGGGGTTCCAGCCGGGAAAGGGACTGGGGAAGGACTTGCAGGGGATCTCGGCTCCGGTAGAAGCCCACCTGAGGAAGGGCAGGGGCGCCATTGGCGCCTACGGACCCGAGAAACCGGCCGCCCCCCCTAAGAAAAAGGAAATCCAAGAAGACGTCGAAGATGACGACAAAAGCGACCACAAGTGGAAAAAGAGCGACATGGTTAAGAAAAAAACGCGCTATTATTACAGAAGCGTCGACGACGTAATCGAGAAGGGTAAACGACCTGGGGCTTTTCGTAACATGGGGGCCGCCAGCGAGTTGAGTAAGGTCAAAGTTATTGACATGACGGGGCCGCAGCAGAGGGTTTTGAGCGGCTATCACGCCCTGAGTGGGTTAAAAGCGCCCCCTGGAGTCGAGCACTTCGAAGACGTCGTCCACAAGAAGTGTTCGAATTTCGCGTTGCCTGAAATCCAACACAACTTGGACGTTTTGGTGGACATGTGTGAACAAGATATTATTCGGATCGATCGCGGTACCAGACACAACCAAGACAGAATCGTGGCTTTGAAAAACGAGCAAGAAAATTTAAAACTGTTGGTTAAGAAAGAGGACGAGTTGGTTGATAATCTGAAGAGCGTGATTGAGATAGTTGATAAGTTGTTGGATCCGTCGTTGGGGTTGTCGCTGCTGCAAGTAGCTCAAATTTTTGATAATTTGCAGGACAACCACTATGAAGAGTTTATCAGGTATGAGTTGGGTGAGCTCGCGCCAGGTTTAGTCGGCCCGCTTTTGACCTCCGCGCTCGCCAGTTGGTCCCCACTGACCAACCCCAAGCAATACATGGATGTGTTTGGTCGTTGGAAGGACATTCTGGACAAGCCCAGACAACGTGGGACACTAGAAGGTAATAATATGGGAATTCAGCCATATGATAGTCTCTTATGGCACACTTGGATGCCTGTAATGCGAATTTGTGTTAGCGCATGGAATCCGAAAGATTGCGATCCTCTGATTACGTTAATTGAGACGTGGATGCCGCTGCTGCCGCAGTGGATCCTGGATAACATTTACGACCAACTGATCATGCCCAAGATCCAGGCCGAGGTAAACGAGTGGAACCCGTTGAGGGACATCATCCCGATACACGTGTGGATCCACCCGTGGATACCTCTCCTGGATGCGCGGCTGCAAACCGTCATTTATCCCATCATCCAGGAGAAGCTGGGGGCGGCTTTGACCAACTGGCACCCGTCGGACAAATCCGCGAAACCCATTTTAAAACCGTGGCAACGGGTGCTGCCAGAGGGCGTCTTCGTCGCGTTTCTTATCAAACACATCGTGCCGAAACTGCAGATGTGTATGCAAAATTTGGTCATCAATCCACACCAACAGCATTTAGAGGCGTGGTATTGGGTGATGGATTGGAGCGATATGTTGTCAGTGGGGAACATGACCTTGATTTTGGATAAGTTCTTTTTCCCGAGGTGGCGCCAGACGTTAGCGATGTGGCTGAATCACAACCCGAATTATAACGAAGTGACGGAATGGTATACAGGGTGGAAGAATATGTTGTCAGACGAGTTGCTAGCGCAGCCTAGTATTAAAGAAAATTTCCATAAGGCGCTTGATATTATGGGACGTGCGGTGAATATGGGGCAACAACCGGGAGCGAAAGAGTCGATTTCGTACCTAAATAGCATGGAACATAATACGCCGCCGCCGCCACCGCCGCCACAAATCGAGAGTTTCGCCGAAACTGTACGCTCTAAACCCCGTCTGTACAAAGACATGTTGGCCCGAAATTGCGAAGAAAGAGGGATTTTGTTTGTCCCTATTCCAAATAAGTATTATGAAGCGAAACAAGTGTACAGGATAGGCTCCAACGGGCTCCAGTGTTACATTGACCAAAACGTGGTGTTTCTGTCACAAAATAACTCAACTTGGGTTCCTACATCTATACCCAGGATTCTAGATATGGCTTAA
- Protein Sequence
- MSDDEMEKFEITDYDLDNEFFRGRKKLTKHQQIYGVWADDSDNDEDERPSFKSRKPKNYSAPIGFVAGGVQQAGKKKEEKEAESDDEKPTTSFKTRDSSSDEEDKPRAGFGAVSEPSGEIAGLRGKNNKGGASLGVGNWERHTKGIGAKLLLQMGFQPGKGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKPAAPPKKKEIQEDVEDDDKSDHKWKKSDMVKKKTRYYYRSVDDVIEKGKRPGAFRNMGAASELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHFEDVVHKKCSNFALPEIQHNLDVLVDMCEQDIIRIDRGTRHNQDRIVALKNEQENLKLLVKKEDELVDNLKSVIEIVDKLLDPSLGLSLLQVAQIFDNLQDNHYEEFIRYELGELAPGLVGPLLTSALASWSPLTNPKQYMDVFGRWKDILDKPRQRGTLEGNNMGIQPYDSLLWHTWMPVMRICVSAWNPKDCDPLITLIETWMPLLPQWILDNIYDQLIMPKIQAEVNEWNPLRDIIPIHVWIHPWIPLLDARLQTVIYPIIQEKLGAALTNWHPSDKSAKPILKPWQRVLPEGVFVAFLIKHIVPKLQMCMQNLVINPHQQHLEAWYWVMDWSDMLSVGNMTLILDKFFFPRWRQTLAMWLNHNPNYNEVTEWYTGWKNMLSDELLAQPSIKENFHKALDIMGRAVNMGQQPGAKESISYLNSMEHNTPPPPPPPQIESFAETVRSKPRLYKDMLARNCEERGILFVPIPNKYYEAKQVYRIGSNGLQCYIDQNVVFLSQNNSTWVPTSIPRILDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00870574;
- 90% Identity
- -
- 80% Identity
- -