Basic Information

Insect: Lasius niger
Gene Symbol: znf423
Assembly: GCA_001045655.1
Location: LBMM01000186.1:17152-36480[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 1.6e-05 0.0017 18.7 1.7 1 23 90 112 90 112 0.98

2 22 0.036 3.9 8.1 4.6 1 23 118 140 118 140 0.98

3 22 1.8e-06 0.0002 21.7 2.3 1 23 146 168 146 168 0.99

4 22 4.8e-05 0.0052 17.2 0.1 1 23 174 196 174 196 0.99

5 22 0.0014 0.15 12.6 3.3 1 23 363 386 363 386 0.97

6 22 1.5 1.6e+02 3.0 0.1 2 23 397 419 396 419 0.88

7 22 0.32 34 5.2 0.1 3 23 487 507 486 507 0.97

8 22 0.0035 0.37 11.3 0.4 3 23 524 544 522 544 0.95

9 22 0.0024 0.26 11.8 0.4 1 23 553 576 553 576 0.93

10 22 2.9 3.1e+02 2.2 0.2 1 23 581 604 581 604 0.91

11 22 3.3 3.5e+02 2.0 0.0 10 23 641 655 640 655 0.93

12 22 2.2 2.4e+02 2.5 2.2 2 23 686 707 686 707 0.96

13 22 0.012 1.3 9.7 0.1 1 23 712 735 712 736 0.93

14 22 2.5 2.7e+02 2.3 0.1 2 23 801 824 800 824 0.81

15 22 9.6e-05 0.01 16.2 0.9 2 23 841 863 840 863 0.96

16 22 0.2 21 5.8 1.8 1 23 872 895 872 895 0.92

17 22 0.71 76 4.1 1.0 2 23 903 924 902 924 0.96

18 22 0.0085 0.91 10.1 0.1 2 23 1088 1110 1087 1110 0.92

19 22 0.064 6.9 7.4 0.2 1 23 1121 1144 1121 1144 0.96

20 22 0.081 8.6 7.0 0.3 2 23 1157 1178 1156 1178 0.95

21 22 0.072 7.7 7.2 0.2 2 23 1187 1209 1186 1209 0.93

22 22 0.0043 0.46 11.1 1.9 1 23 1216 1239 1216 1239 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	1.6e-05	0.0017	18.7	1.7	1	23	90	112	90	112	0.98
2	22	0.036	3.9	8.1	4.6	1	23	118	140	118	140	0.98
3	22	1.8e-06	0.0002	21.7	2.3	1	23	146	168	146	168	0.99
4	22	4.8e-05	0.0052	17.2	0.1	1	23	174	196	174	196	0.99
5	22	0.0014	0.15	12.6	3.3	1	23	363	386	363	386	0.97
6	22	1.5	1.6e+02	3.0	0.1	2	23	397	419	396	419	0.88
7	22	0.32	34	5.2	0.1	3	23	487	507	486	507	0.97
8	22	0.0035	0.37	11.3	0.4	3	23	524	544	522	544	0.95
9	22	0.0024	0.26	11.8	0.4	1	23	553	576	553	576	0.93
10	22	2.9	3.1e+02	2.2	0.2	1	23	581	604	581	604	0.91
11	22	3.3	3.5e+02	2.0	0.0	10	23	641	655	640	655	0.93
12	22	2.2	2.4e+02	2.5	2.2	2	23	686	707	686	707	0.96
13	22	0.012	1.3	9.7	0.1	1	23	712	735	712	736	0.93
14	22	2.5	2.7e+02	2.3	0.1	2	23	801	824	800	824	0.81
15	22	9.6e-05	0.01	16.2	0.9	2	23	841	863	840	863	0.96
16	22	0.2	21	5.8	1.8	1	23	872	895	872	895	0.92
17	22	0.71	76	4.1	1.0	2	23	903	924	902	924	0.96
18	22	0.0085	0.91	10.1	0.1	2	23	1088	1110	1087	1110	0.92
19	22	0.064	6.9	7.4	0.2	1	23	1121	1144	1121	1144	0.96
20	22	0.081	8.6	7.0	0.3	2	23	1157	1178	1156	1178	0.95
21	22	0.072	7.7	7.2	0.2	2	23	1187	1209	1186	1209	0.93
22	22	0.0043	0.46	11.1	1.9	1	23	1216	1239	1216	1239	0.97

Sequence Information

Coding Sequence: ATGCTCTTCAAAGGTAACAGCTCGCGGCTGGAGCTGCTGATTGGCAAGATCCACGCACACAAAGAACCGTCACAAGACGAGCAACACAAGTCTAAAGAAGCCTTAGGAACCGGAAGTTCCTCGTGGCATAGCGAGGATGGCGGACCCAACTCACGTCGCGGCGGCGAGACACCGTCCTCCTGCGCGACTCCGACGTCGGCGAGTTTCCCGTCGGAGCCCGAGGTCGACGCCGACGTCAACCCCGACGGCACCAACCCCGCCGCCCCTTATCCCTGCCAGTTCTGCGACAGAAAATTTCCGCGTCTCAGCTATCTGAAGAAGCACGAACAGAGTCACGGCGATCAGATGCCGTATCAGTGCAGTTGGTGCAACAGACTGTTCAAGCACAAGCGCAGCCGCGATCGTCACGTAAAGCTGCACACCGGGGACAGGCGATATCGCTGCTCGAAATGTGAGGCTGCCTTCTCCAGGAGCGATCACCTAAAGATCCACTTGAAAACGCATGACACCCAGAGGCCTTACCAATGCACGGCTTGCACGAGAGGCTACAGTACAGCCGCGGCCTTAACGGCGCACATGCAGTCTCACAAGAAACAtcaatcgtcgtcgtcgtcgtctcaaTCGGCCGGTCTCAAGCTTCAGGACGTAGACTACGGTAGAAGAAGCGTATCCTCGCACAGCACGTCGTCACCGCCGGTACCGTcttcgccgtcgccgtcgctgAATCTCAGTCTGAACCCGAGGAACGTCCTGAAGATGTCGCAGGGCACCGGCAGCGCCTCCACCACTCCGGTTCTCAGCTCGCCTCTGAAACTCGCCTGCATGTACTGCACCCGGGACTCGTTCAGCTGCATGCAGCAGCTGCAGATGCACGTGCACACGATGCATCAGGCGATCCTGAGCGGCGCGGAAGGTACGGCTCGGGCGCCGTCGCCAAGCAGAACGTCCAACGAGCAGCAGACGGCTGTCTGCAAGCCGCTGGATCGCCAGGACGTCACGAAGGAACCGCGACTGGATCGCAAGTACCCGACGTCCGAGGATCGAGGCGACAGACCGGCTGGCGAGCGGGACCATTACGAGAACGCGTTTACCTGCAACCAGTGCACAATGAAGTTCTCCACGTTGACCTGCCTACGCGATCATTTGTTGTCGATACACCGAATGGACGGTTTCGGCGCGGCGATGATGATGTGTCCCTTGTGCAGTATCCCGTGTGCCTCGGCGGCTTCCTACGCCGAGCACTACGTTCTTCAGCATTGTGAGAATCGCCGACCGGCGCCGACGCACGCTATAGATTACGGAGAAACGAAGCTGAACGGCAGCATTTACGATGGTGCAGCGAGAGATTCCCGGATATCGAAAACCCGGGACGCACCGGAAGCCGCCGATCTCACGAATAAGCACTCGACCAGATCTTCCTCGGATGCCATCGGCGGTTATACCGCTAATACTCTGCTATGCGGTCAATGCGGTGCCGCGCTAAAGGACTTCGAATCCTTCCGCGAGCATGTGGCGCGACACTTGCAGGCCGACCACCGTACCCAGGAGATGTCCGGTAGACAACATCTATGTCCCAAATGCGAAGCCATCTTCTCGGACCGCGAGGACATGCTGGCTCATCTGACCAAGCACTATCTGGGCCAGGTCAGCAAGGAGTATGCGTGCAGTGCCTGCAAAAAGCTCTACCCGCATCCGGATCAACTTCAGAGGCACCTTTTGGACGTGCACGCGCATCATCTGTACCGTTGCGCTCTGTGCCGGGACACCTTCGACTCCAGAGTAGCGATACAGGTGCACTTTGCGGTGAAGCACAGCCAGGAGTGCCGGGTCTACCGGTGCAGCACGTGCGCCGTGTCCTCCAACAATGAGAACTCTCCGCCGGGAACAAACGCGACAGCCTCCGGCGAAGGTAGGAGCTTCTTCAGGAGCGAGGCCGAGTTGGCGGCGCACGTGCGCAGTGTGCACGCACCTCCATCCGCCGTCTCCCTGATGAACAGCAGCCCGGTGAGTGCCGCGAGGAGCCCGGCCTCGACGCCCGGTGGTGGCGTCGCGGCGCGTTGTTTCTTCTGCGGAATCTGCTGCGGCTCAGATCTCGAACTCCAGCTCCATTTGGCCAGCCACTCAACCAGTCTCTACAGATGTCCCATCTGCCGAGAAGGTTTCGCGGTGGAGTTTCTCTTGGATCGACACGTCGCTCAGGCTCATCATGCGACCCAGGACCATCAGGTGCCATCCGTCAGAAGTAACTCAAGAGAGAACGGACGCGTTCATCGAACGGCCAGAAATCAGGAGGAAACGAAGTCTCTGAAGAGAGGTCGCTCGCCAGCGTCGAGTAACAATAATTCCCTGAATCAGCGCGACAACAATAACAAACGTACAAACTACGGCGCTTCCGGCCAGCAATGCGAGCTCTGCGAACGCGGCGAGTTCGCGAACGAGGCCGAGTTGCAGGCACACAAGAAACTGGCTCACACACCTCCCAAACTGTCCAATAAGAGTCTATCCACCTTGAGTACCCTGACGTGCGGTTATTGCGGCGAAGTTTGTCGTTCGCGAAACGAGCTAGAGTCGCACACGAGAATCCAACACGCGTCCAACGAGCCCGGCGGTCGTCACAAGTGCAACATCTGCGACGAGGTATGCCTTTCCAGCGCGACCTTGGCCGAACACAAGCTCCAGAAGCACTGTAAAATACAACTGAGCGACACGTGCGTGGTGTGTCGTGGTTGCCTGACCTCGGAGAGTCAATTCCTGGACCACGTGCAAAGACATAGCTTGGAGAACGTGGATCCGCAACAACGACTGGACAATTCTTTGCCTCATTTGCCCGCGCCGTGCGTCGTTTGCCGGCAGACGCTGATCAGCGAACTAGAGTGTCGTCTGCATGCGCGGCATCATCTACGGACGTCTTCGGGACCGCGCAGCGCCGCCGTTTCTAGTCCGAACAGTCCTGGTGGCGGCAAAACCCAGAGTCAGGGTTGCTGTCTCTGTTTGCGTGATTTTGCCGCCGATGATTTTGTCAGTCTACCACCCAATCCTGCCAGTACGAGCGGACAACCGCTCAAGGTCTGCAAACCCTGCTACATGCGACATTCTCAGGGATTGCCTATCCTAAACTCGACGACCTATGAACGGGCCAAGTACGATACGACCTGGTTCGCGAGCAAGAACGGCCAATGGAATAACTCCAAGGACAAGTGGGACGACAGAGGACTCAACGTGGAGAATCGATCCAGAAACGAAGGAAGCACGGATAAAAAACGCTGTGAGGAGTGCGGAGTGAAGTTCGAAGATTCCGAAGAGGCGGAGAAACACAGAATCGCAGAACACGAAAAGATTAGCACTAGTGGTTCGAAGacttatacatgtatacagtGTCAGATATCATTTCCAACCGAAGCCAAAATTCAACAACACGTGAGAAAGGAACATTTGGAAACGTCTAGGAGAGCTTCCCTGGAAGCCTTGCGGTGTCATTTGTGCTCATTTGAAGCCACCAGTCCTATGCAACTGCAAATTCACTTAATAGAGCATACTTTTGTTGGCTGCGCTGCGCTCAGCTGTTACCTCTGCCAGTCGCTTTTCACAACTCCTATTGGTCTTCAGAGTCACATGCTACAGGAACACGGCCTGGGCGCGCGACCATACGATTGCCCCAAATGCACGCTCAAGTTCTTCTTCAACGCGGAGCTGGACCACCACATACTGACCTTCCACCGTCCGAGGGATGAGATTCATTCTTCGGCCGAGAACGCTCGCGAGATGAAGAATCGCGAACCCGATGGCGGTGTAACAGTGAAGGAGGAAGTGATACAAGGTGGCAAGGAAGAGGGGGATGAGGAAGAGGAAGTGAACGTGGACGATCAGATAGGACAGGAGGAACACGAGGAAGCTAAACGAGAGGAACAGAAGTTGAAGACGGAAGTAGATATCGAGACGACATCCAACAAAATGGAATCGTGA
Protein Sequence: MLFKGNSSRLELLIGKIHAHKEPSQDEQHKSKEALGTGSSSWHSEDGGPNSRRGGETPSSCATPTSASFPSEPEVDADVNPDGTNPAAPYPCQFCDRKFPRLSYLKKHEQSHGDQMPYQCSWCNRLFKHKRSRDRHVKLHTGDRRYRCSKCEAAFSRSDHLKIHLKTHDTQRPYQCTACTRGYSTAAALTAHMQSHKKHQSSSSSSQSAGLKLQDVDYGRRSVSSHSTSSPPVPSSPSPSLNLSLNPRNVLKMSQGTGSASTTPVLSSPLKLACMYCTRDSFSCMQQLQMHVHTMHQAILSGAEGTARAPSPSRTSNEQQTAVCKPLDRQDVTKEPRLDRKYPTSEDRGDRPAGERDHYENAFTCNQCTMKFSTLTCLRDHLLSIHRMDGFGAAMMMCPLCSIPCASAASYAEHYVLQHCENRRPAPTHAIDYGETKLNGSIYDGAARDSRISKTRDAPEAADLTNKHSTRSSSDAIGGYTANTLLCGQCGAALKDFESFREHVARHLQADHRTQEMSGRQHLCPKCEAIFSDREDMLAHLTKHYLGQVSKEYACSACKKLYPHPDQLQRHLLDVHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRVYRCSTCAVSSNNENSPPGTNATASGEGRSFFRSEAELAAHVRSVHAPPSAVSLMNSSPVSAARSPASTPGGGVAARCFFCGICCGSDLELQLHLASHSTSLYRCPICREGFAVEFLLDRHVAQAHHATQDHQVPSVRSNSRENGRVHRTARNQEETKSLKRGRSPASSNNNSLNQRDNNNKRTNYGASGQQCELCERGEFANEAELQAHKKLAHTPPKLSNKSLSTLSTLTCGYCGEVCRSRNELESHTRIQHASNEPGGRHKCNICDEVCLSSATLAEHKLQKHCKIQLSDTCVVCRGCLTSESQFLDHVQRHSLENVDPQQRLDNSLPHLPAPCVVCRQTLISELECRLHARHHLRTSSGPRSAAVSSPNSPGGGKTQSQGCCLCLRDFAADDFVSLPPNPASTSGQPLKVCKPCYMRHSQGLPILNSTTYERAKYDTTWFASKNGQWNNSKDKWDDRGLNVENRSRNEGSTDKKRCEECGVKFEDSEEAEKHRIAEHEKISTSGSKTYTCIQCQISFPTEAKIQQHVRKEHLETSRRASLEALRCHLCSFEATSPMQLQIHLIEHTFVGCAALSCYLCQSLFTTPIGLQSHMLQEHGLGARPYDCPKCTLKFFFNAELDHHILTFHRPRDEIHSSAENAREMKNREPDGGVTVKEEVIQGGKEEGDEEEEVNVDDQIGQEEHEEAKREEQKLKTEVDIETTSNKMES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01406753;
90% Identity: iTF_00867687; iTF_00869107; iTF_01077705; iTF_01245473; iTF_00730275; iTF_00280732; iTF_00110077; iTF_00729565; iTF_01255047; iTF_00730994; iTF_00264505; iTF_00265213;
80% Identity: -