Basic Information

Insect: Nylanderia fulva
Gene Symbol: znf423
Assembly: GCA_005281655.1
Location: NW:1627106-1705632[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 1.8e-05 0.0014 18.7 1.7 1 23 143 165 143 165 0.98

2 22 0.041 3.3 8.1 4.6 1 23 171 193 171 193 0.98

3 22 2.1e-06 0.00017 21.6 2.3 1 23 199 221 199 221 0.99

4 22 5.5e-05 0.0044 17.1 0.1 1 23 227 249 227 249 0.99

5 22 0.0008 0.065 13.4 2.3 1 23 416 439 416 439 0.97

6 22 1.7 1.4e+02 3.0 0.1 2 23 450 472 449 472 0.88

7 22 0.36 29 5.1 0.1 3 23 540 560 539 560 0.97

8 22 0.023 1.9 8.8 0.4 3 23 577 597 575 597 0.95

9 22 0.0027 0.22 11.8 0.4 1 23 606 629 606 629 0.93

10 22 3.2 2.6e+02 2.1 0.2 1 23 634 657 634 657 0.91

11 22 3.7 3e+02 1.9 0.0 10 23 694 708 693 708 0.93

12 22 2.5 2e+02 2.5 2.2 2 23 739 760 739 760 0.96

13 22 0.013 1.1 9.6 0.1 1 23 765 788 765 789 0.93

14 22 2.9 2.3e+02 2.3 0.1 2 23 854 877 853 877 0.81

15 22 9.2e-05 0.0074 16.4 1.0 2 23 894 916 893 916 0.96

16 22 0.22 18 5.8 1.8 1 23 925 948 925 948 0.92

17 22 0.8 64 4.0 1.0 2 23 956 977 955 977 0.96

18 22 0.0019 0.15 12.3 0.1 2 23 1141 1163 1140 1163 0.96

19 22 0.17 13 6.1 0.2 1 23 1174 1197 1174 1197 0.95

20 22 0.11 8.5 6.8 0.2 2 23 1209 1230 1208 1230 0.95

21 22 0.26 21 5.6 0.1 2 23 1239 1261 1238 1261 0.92

22 22 0.0048 0.39 11.0 1.9 1 23 1268 1291 1268 1291 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	1.8e-05	0.0014	18.7	1.7	1	23	143	165	143	165	0.98
2	22	0.041	3.3	8.1	4.6	1	23	171	193	171	193	0.98
3	22	2.1e-06	0.00017	21.6	2.3	1	23	199	221	199	221	0.99
4	22	5.5e-05	0.0044	17.1	0.1	1	23	227	249	227	249	0.99
5	22	0.0008	0.065	13.4	2.3	1	23	416	439	416	439	0.97
6	22	1.7	1.4e+02	3.0	0.1	2	23	450	472	449	472	0.88
7	22	0.36	29	5.1	0.1	3	23	540	560	539	560	0.97
8	22	0.023	1.9	8.8	0.4	3	23	577	597	575	597	0.95
9	22	0.0027	0.22	11.8	0.4	1	23	606	629	606	629	0.93
10	22	3.2	2.6e+02	2.1	0.2	1	23	634	657	634	657	0.91
11	22	3.7	3e+02	1.9	0.0	10	23	694	708	693	708	0.93
12	22	2.5	2e+02	2.5	2.2	2	23	739	760	739	760	0.96
13	22	0.013	1.1	9.6	0.1	1	23	765	788	765	789	0.93
14	22	2.9	2.3e+02	2.3	0.1	2	23	854	877	853	877	0.81
15	22	9.2e-05	0.0074	16.4	1.0	2	23	894	916	893	916	0.96
16	22	0.22	18	5.8	1.8	1	23	925	948	925	948	0.92
17	22	0.8	64	4.0	1.0	2	23	956	977	955	977	0.96
18	22	0.0019	0.15	12.3	0.1	2	23	1141	1163	1140	1163	0.96
19	22	0.17	13	6.1	0.2	1	23	1174	1197	1174	1197	0.95
20	22	0.11	8.5	6.8	0.2	2	23	1209	1230	1208	1230	0.95
21	22	0.26	21	5.6	0.1	2	23	1239	1261	1238	1261	0.92
22	22	0.0048	0.39	11.0	1.9	1	23	1268	1291	1268	1291	0.97

Sequence Information

Coding Sequence: ATGTCCAGGAGGAAGCAAGCGAAGCCACGATCTCTCAAACGGGACGAAGAGTGGGACGGCAACGAGCAGAATGTCCTGGAGGCGGCCGAACAGGATAACGAAACGACGGCGATTAAGCAAGACgacgaagaagaagaggaagaggaagagttGCAGCGGGCGTTCAGCCGTCAGTCAGCAGAAGATTACTTGCAAGATGGCAGGCCAACTTCCATTCAAGGTCCTGATCTGGAGAATCAGAACAGTCTCGACAGCGAAGCCTTAGGAACCGGAAGTTCCTCGTGGCACAGCGAGGATGGCGGGCCCAATTCACGACGCGGCGGCGAGACACCGTCTTCCTGCGCCACTCCGACGTCAGCGAGTTTCCCGTCGGAGCCTGAGGTCGACGCCGACGTCAACCCCGACGGCACCAACCCTGCCGCGCCCTATCCCTGCCAGTTCTGCGACAGGAAGTTTCCGCGTCTCAGCTATCTGAAGAAGCACGAACAGAGTCACGGTGATCAGATGCCGTATCAGTGCAGTTGGTGCAACAGACTGTTCAAGCACAAACGCAGTCGCGATCGTCACGTGAAGCTGCACACCGGAGACAGGCGATATCGCTGCTCGAAATGTGAGGCTGCCTTCTCTAGGAGCGATCACCTGAAGATTCACTTGAAAACGCACGACACCCAGAGGCCTTACCAATGCACGGCTTGCACGAGAGGCTACAGTACAGCTGCGGCCTTGACAGCGCACATGCAGTCCCACAAGAAACACCAGTCGTCGTCGTCATCTCAATCGGCCGGTCTCAAGCTCCAGGACATGGACTACGGTAGAAGAAGCGTGTCCTCGCACAGCACGTCGTCGCCGCCGGTGCCGTCGTCGCCGTCGCCGTCGCTGAACCTCAGCCTGAACCCGAGGAACGTCCTGAAGACGTCACAAGGCACCGGCAGCGCCTCCACGACTCCGGTTCTCAGCTCACCCTTGAAACTCGCCTGCATGTACTGCACCCGGGACTCGTTTAACTGCATGCAGCAGCTGCAGATGCACGTACACACGATGCACCAGGCGATCCTCAGCGGCGCGGAAGGTGCGGCTCGACCGCCGTCGCCGAGTAGAGCCTCCAACGAGCAGCAGGCGGCTGCCTGTAAACCACTGGACCGGCAGGATCACGTTGCGAAGGAATCCCGACTGGATCGCAAGTACCCGACGTCCGAAGATCGGGGCGACCGGCCCGCTGGCGAGCGGGACCATTACGAGAACGCGTTCACCTGCAACCAATGTACCATGAAGTTCTCTACGTTGGCCTGTCTACGCGATCATTTGTTGTCGATACACCGAATAGACGGTTTCGGCGCAGCGATGATGATGTGTCCCCTGTGCAGCATTCCGTGCGCCTCGGCGGCTTCCTACGCCGAGCACTACGTTCTTCAGCATTGTGAGAATCGCCGGCCGGCGCCGACGCACGCTATAGATTACGGAGAAACGAAGCTGAACGGCGGCATTTACGACGGTGCCGCGAGAGATTCCCGGATATCGAAAAGCCGGGACGCGCCGGAAGCCGCCGATCTCACGAACAAGCACTCGAGCAGATCCTCCTCGGACGCTGTCGGCGGTTATACCGCTAATACTCTGCTGTGCGGTCAGTGCGGTGCCGCGTTAAAAGACTTTGAATCCTTTCGGGAGCATGTGGCGCGACACTTGCAAGCCGACCACCGTAACCAGGAGATGTCCGCCAGGCAACATCTGTGTCCCAAGTGCGAGGCCATCTTCTCGGAGCGCGAGGACATGCTGGCTCACCTGACCAAGCATTATCTGGGCCAGGTCAGCAAGGAGTACGCGTGCAGTGCCTGTAAAAAACTCTACCCGCATCCGGATCAACTTCAGAGGCACCTTCTGGACGTGCACGCGCATCATCTGTACCGTTGCGCTCTGTGCCGGGACACCTTCGACTCCAGAGTAGCGATACAGGTGCACTTCGCGGTGAAGCACAGCCAGGAGTGTCGAGTCTACCGGTGTAGCACGTGCACCACCGTATCCAACAATGAGAACTCACCGCCGGGAGCGAACACAGCAGTTTCCGGCGAGGGTAGGAGCTTCTTCAGGAGTGAGGCTGAATTGGCAGCTCATGTGCGCAGCGTGCACGCACCTCCATCCGCCGTCTCCCTGATGAACAACAGCCCGGTCGGTGCCGCGAGGAGTCCAGCCTCGACGCCCGGTGGCGGCATCGCGGCGCGTTGCTTCTTCTGCGGAATCTGCTGCGGTTCGGATCTCGAACTCCAGCTTCATTTGGCCAGCCACTCGACCAGTCTCTACAGATGTCCCATCTGCCGTGAAGGTTTCGCCGTGGAATTTCTCTTAGATCGACACGTCGCCCAGGCTCACCACGCGGCCCAAGACCATCAGATGCCATCCGTGAGAAGTAACTCGAGAGAGAATGGGCGCGTTCATCGAACGACCAGAAATCAGGAAGAAACGAAGTCTCTGAAGAGAGGTCGCTCGCCAGCGTCGAGTAACAACAATTCCCTGAATCAGCGCGACAACAATAACAAACGTGCAAATTACGGCACTTCCGGTCAGCAATGCGAGCTCTGCGAACGCGGCGAATTCGCGAACGAGGCTGAGCTGCAGGCACATAAGAAACTGGCTCACACACCTCCTAAACTGTCCAATAAGAGTCTAGGCACCTTGAGTACCCTGACGTGCGGTTATTGCGGCGAGGTTTGTCGTTCGCGAACCGAGTTAGAATCGCATACGAGGATCCAACACGCGTCCAACGAACCCGGTGGACGTCACAAATGCAACATTTGCGACGAGGTGTGCCTGTCTAGTGCGACCTTGGCCGAACACAAACTCCAGAAACACTGTAAAATACAATTGAGCGACACGTGCGTGGTGTGTCGTGGTTGCCTGACCTCGGAGAGTCAATTCCTGGATCACGTGCAAAGACACAGTTTAGAGAACGTGGACCCGCAGCAACGACTGGACAATTCTTTGCCTCATCTACCCGCGCCGTGCGTCGTTTGCCGGCAGACGCTGATCAGCGAACTGGAGTGTCGCCTGCATGCGCGGCATCATTTACGAACGTCTTCAGGATCGCGTAACGCCGCCGCTTCTAGTCCAACAAGTCCCGGTAGCGGCAAAACCCAGAACCAGGGTTGCTGTCTCTGTTTGCGCGATTTTGCCGCTGATGATTTCGTCAGCCTACCACCTAATCCTGCCAGTACGAGCGGACAACCGCTCAAGGTCTGCAAACCCTGCTACATGCGACATTCTCAGGGATTGCCTATTCTAAACTCAACAACCTACGAACGGGCCAAGTACGATGCGACTTGGTTCGCCAGCAAGAACGGCCAATGGAATAGCTCCAAGGACAAGTGGGATGACAGAGGACTCAATGTAGAGAATCGAACCAGAAACGAGGGAAGTACAGATAAAAAACGCTGTGAAGAATGCGGAGTGAAGTTCGAAGATTCAGAAGAGGCAGAGAAGCACAGAATCACAGAACATGAAAAGACTAACACTAATGGTTCGAAAACCTATACATGTATACAGTGTCAGGTATCATTTCCATCAGAAGCCAAAATTCAACAACACGTGAGAAAAGAACATCTGGAATCTAGGAGAGCTTCCCTAGAAGCCTTACGATGCCATTTGTGCTCATTTGAGGCCGCCAGTCCTACGCAATTGCAAATTCACTTAATAGAGCATACTTTCGTTGGCTGCGCTGCGCTCAGTTGTTATCTCTGCCAATCGCTCTTCACAACTCCTATTGGTCTTCAGAATCACTTGATACAAGAACACGGCCTGGCCGCGCGACCGTACGATTGTCCCAAGTGCACGCTCAAGTTCTTCTTCAACGCGGAGCTGGACCATCACATCTTGACCTTCCACCGTTCAAGGGACGAGAATCATCCTTCGTCGGCCGAAAATGCTTGCGAGATGAAGAATCACGAATCCGATGGCGGTGTAAAAGTGAAGGAAGAAATGATACAAGGTGACAAGGAAGAGGgggaggaagaggaggaagtGAATGTGGATGATCAGACAGGACAGGAGGAACACGAGGAAGCTAAACGAGAGGAACAGAAGTTGAAGACGGAAGTGGATGTCGAGACGACATCCAACAAAATGGAATCGTGA
Protein Sequence: MSRRKQAKPRSLKRDEEWDGNEQNVLEAAEQDNETTAIKQDDEEEEEEEELQRAFSRQSAEDYLQDGRPTSIQGPDLENQNSLDSEALGTGSSSWHSEDGGPNSRRGGETPSSCATPTSASFPSEPEVDADVNPDGTNPAAPYPCQFCDRKFPRLSYLKKHEQSHGDQMPYQCSWCNRLFKHKRSRDRHVKLHTGDRRYRCSKCEAAFSRSDHLKIHLKTHDTQRPYQCTACTRGYSTAAALTAHMQSHKKHQSSSSSQSAGLKLQDMDYGRRSVSSHSTSSPPVPSSPSPSLNLSLNPRNVLKTSQGTGSASTTPVLSSPLKLACMYCTRDSFNCMQQLQMHVHTMHQAILSGAEGAARPPSPSRASNEQQAAACKPLDRQDHVAKESRLDRKYPTSEDRGDRPAGERDHYENAFTCNQCTMKFSTLACLRDHLLSIHRIDGFGAAMMMCPLCSIPCASAASYAEHYVLQHCENRRPAPTHAIDYGETKLNGGIYDGAARDSRISKSRDAPEAADLTNKHSSRSSSDAVGGYTANTLLCGQCGAALKDFESFREHVARHLQADHRNQEMSARQHLCPKCEAIFSEREDMLAHLTKHYLGQVSKEYACSACKKLYPHPDQLQRHLLDVHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRVYRCSTCTTVSNNENSPPGANTAVSGEGRSFFRSEAELAAHVRSVHAPPSAVSLMNNSPVGAARSPASTPGGGIAARCFFCGICCGSDLELQLHLASHSTSLYRCPICREGFAVEFLLDRHVAQAHHAAQDHQMPSVRSNSRENGRVHRTTRNQEETKSLKRGRSPASSNNNSLNQRDNNNKRANYGTSGQQCELCERGEFANEAELQAHKKLAHTPPKLSNKSLGTLSTLTCGYCGEVCRSRTELESHTRIQHASNEPGGRHKCNICDEVCLSSATLAEHKLQKHCKIQLSDTCVVCRGCLTSESQFLDHVQRHSLENVDPQQRLDNSLPHLPAPCVVCRQTLISELECRLHARHHLRTSSGSRNAAASSPTSPGSGKTQNQGCCLCLRDFAADDFVSLPPNPASTSGQPLKVCKPCYMRHSQGLPILNSTTYERAKYDATWFASKNGQWNSSKDKWDDRGLNVENRTRNEGSTDKKRCEECGVKFEDSEEAEKHRITEHEKTNTNGSKTYTCIQCQVSFPSEAKIQQHVRKEHLESRRASLEALRCHLCSFEAASPTQLQIHLIEHTFVGCAALSCYLCQSLFTTPIGLQNHLIQEHGLAARPYDCPKCTLKFFFNAELDHHILTFHRSRDENHPSSAENACEMKNHESDGGVKVKEEMIQGDKEEGEEEEEVNVDDQTGQEEHEEAKREEQKLKTEVDVETTSNKMES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01406753;
90% Identity: iTF_00868309;
80% Identity: -