Basic Information

Insect: Formica selysi
Gene Symbol: znf423
Assembly: GCA_009859135.1
Location: CM020811.1:7117226-7130242[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 1.8e-05 0.0029 18.8 1.7 1 23 67 89 67 89 0.98

2 21 0.041 6.8 8.2 4.6 1 23 95 117 95 117 0.98

3 21 2.1e-06 0.00034 21.7 2.3 1 23 123 145 123 145 0.99

4 21 5.5e-05 0.0091 17.2 0.1 1 23 151 173 151 173 0.99

5 21 0.024 3.9 8.9 2.6 1 19 339 357 339 361 0.95

6 21 0.61 1e+02 4.5 0.1 2 23 371 393 370 393 0.88

7 21 0.36 59 5.2 0.1 3 23 462 482 461 482 0.97

8 21 0.0061 1 10.8 0.4 3 23 499 519 497 519 0.95

9 21 0.0027 0.45 11.9 0.4 1 23 528 551 528 551 0.93

10 21 3.2 5.3e+02 2.2 0.2 1 23 556 579 556 579 0.91

11 21 2.6 4.4e+02 2.5 0.0 10 23 615 629 614 629 0.94

12 21 2.5 4.1e+02 2.5 2.2 2 23 660 681 660 681 0.96

13 21 0.0045 0.74 11.2 0.1 1 23 686 709 686 710 0.94

14 21 2.9 4.8e+02 2.4 0.1 2 23 773 796 772 796 0.81

15 21 0.00011 0.018 16.3 0.9 2 23 814 836 813 836 0.96

16 21 0.39 65 5.1 2.6 1 23 845 868 845 868 0.92

17 21 0.8 1.3e+02 4.1 1.0 2 23 876 897 875 897 0.96

18 21 0.0018 0.3 12.4 0.1 2 23 1060 1082 1059 1082 0.96

19 21 0.23 38 5.8 0.2 2 23 1132 1153 1131 1153 0.95

20 21 0.31 51 5.4 0.2 2 23 1162 1184 1161 1184 0.93

21 21 0.066 11 7.5 3.0 1 23 1191 1214 1191 1214 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	1.8e-05	0.0029	18.8	1.7	1	23	67	89	67	89	0.98
2	21	0.041	6.8	8.2	4.6	1	23	95	117	95	117	0.98
3	21	2.1e-06	0.00034	21.7	2.3	1	23	123	145	123	145	0.99
4	21	5.5e-05	0.0091	17.2	0.1	1	23	151	173	151	173	0.99
5	21	0.024	3.9	8.9	2.6	1	19	339	357	339	361	0.95
6	21	0.61	1e+02	4.5	0.1	2	23	371	393	370	393	0.88
7	21	0.36	59	5.2	0.1	3	23	462	482	461	482	0.97
8	21	0.0061	1	10.8	0.4	3	23	499	519	497	519	0.95
9	21	0.0027	0.45	11.9	0.4	1	23	528	551	528	551	0.93
10	21	3.2	5.3e+02	2.2	0.2	1	23	556	579	556	579	0.91
11	21	2.6	4.4e+02	2.5	0.0	10	23	615	629	614	629	0.94
12	21	2.5	4.1e+02	2.5	2.2	2	23	660	681	660	681	0.96
13	21	0.0045	0.74	11.2	0.1	1	23	686	709	686	710	0.94
14	21	2.9	4.8e+02	2.4	0.1	2	23	773	796	772	796	0.81
15	21	0.00011	0.018	16.3	0.9	2	23	814	836	813	836	0.96
16	21	0.39	65	5.1	2.6	1	23	845	868	845	868	0.92
17	21	0.8	1.3e+02	4.1	1.0	2	23	876	897	875	897	0.96
18	21	0.0018	0.3	12.4	0.1	2	23	1060	1082	1059	1082	0.96
19	21	0.23	38	5.8	0.2	2	23	1132	1153	1131	1153	0.95
20	21	0.31	51	5.4	0.2	2	23	1162	1184	1161	1184	0.93
21	21	0.066	11	7.5	3.0	1	23	1191	1214	1191	1214	0.97

Sequence Information

Coding Sequence: ATGCTAAAGGACATGCGTAACGGGCGAGaAGCTCTAGGAACCGGAAGTTCCTCGTGGCATAGCGAGGATGGCGGGCCCAATTCCCGCCGCGGTGGCGAGACACCGTCCTCCTGCGCGACTCCAACATCGGCGAGTTTCCCGTCGGAGCCTGAGGTCGACGCCGACGTCAATCCCGACGGCACCAATCCCGCCGCCCCCTATCCCTGCCAATTCTGCGACAGGAAGTTTCCGCGTCTTAGCTATCTGAAGAAGCACGAACAGAGTCACGGTGATCAGATGCCGTATCAGTGCAGTTGGTGCAACAGACTGTTCAAGCACAAGCGTAGCCGCGATCGTCACGTAAAGCTGCACACTGGGGACAGGCGATATCGCTGCTCGAAATGTGAGGCTGCCTTCTCTAGGAGCGATCACCTGAAGATCCATTTGAAAACGCATGACACCCAGAGGCCTTATCAATGCACGGCTTGCACGAGAGGCTACAGTACAGCCGCGGCTTTAACGGCGCACATGCAGTCTCACAAGAAACATcaatcatcgtcgtcgtctcAATCGGCCGGTCTCAAGCTTCAGGACGTCGACTATGGTAGAAGAAGCGTATCCTCGCATAGCACGTCGTCACCGCCGGTaccgtcgtcgccgtcgccgtcaTTGAATCTCAGTCTGAACCCGAGGAACGTCCTGAAGACGTCGCAGGGCACCGGCAGTGCCTCCACCACTCCGGTTCTCAGCTCGCCCCTGAAACTCACCTGCATGTACTGCACCCGGGACTCGTTCAGCTGCATGCAGCAGCTGCAAATGCACGTGCACACAATGCACCAGGCGATCCTGAGTGGCGCGGAAGGTCCAGCTCGGCCGCCATCGCCGAGCAGAACGTCCAGCGAGCAGCAGGCGACTGTCTGCAAGCAGCTGGATCGTCAGGACGTCGCGAAGGAATCGCGACTGGATCGCAAGTACCCGACGTCCGAGGACCGAGGCGACAGGTCGGCTGTCGAACGGGATCATTACGAGAACGGGTTCACCTGCAATCAGTGCACCATGAAGTTCTCTACGTTGACCCTCCTACGCGATCATTGTGTCGAACACCGAATCGACGTGTCGACGGCGATGATGATGTGTCCCTTGTGCAGTATACCGTGTTCCTCGGCGGCTTCCTACGCCGAGCACTACGTCCTTCAGCACTGTGAGAATCGCCGACCGGCGCCGACGCACGCTATAGATTACGGGGAAACGAAGCTGAACGGCGGCATTTACGATGGTACCGCGAGGGATCCCTCCCGGATATCGAGAACTCGGGACGCGCCGGAAGCCGCTGATCTCACGAATAAGCACTCGACCAGATCTTCCTCGGATACCGCTGGCAGTTACACTGCTGATACTCTGCTATGCGGCCAATGCGGTGCCGCATTAAAAGACTTCGAATCCTTCCGCGAGCATGTGGCGCGACACTTGCAGGCCGACCACCGTAATCAGGAGATGTCCGGCAGACAACATCTATGTCCCAAATGCGAAGCCATCTTCTCTGACCGCGAGGATATGTTGGTCCACCTGACCAAGCATTATCTAGGCCAGGTCAGCAAAGAGTACGCCTGCAGTGCCTGCAAAAAGCTCTATCCGCATCCAGATCAGCTTCAGAGGCACCTTTTGGACGTGCATGCGCATCATCTGTACCGTTGCGCTCTGTGCCGGGACACCTTCGACTCCAGAGTAGCAATACAGGTGCATTTTGCGGTGAAACACAGCCAAGAGTGCCGGGTCTACCGGTGCAGCACGTGCGCCGTGTCCAACAATGAGAACTCGCCGCCGGGAGGAAACGTGACGGCTTCTGGCGAAGGTAGGAGCTTCTTCAGGACCGAGGCCGAATTGGCGGCGCACGTGCGTAGTGTGCACGCGCCTCCACCCGCTGTCTCTCTGATGAATAGCAGCCCGGTGGGTGCTGCGAGGAGCCCGGCCTCGACGCCCGGTGGTGGCATCGCGGCGCGTTGTTTCTTCTGCGGGATTTGCTGCGGTTCAGATCTCGAACTCCAGCTTCATTTGGCCAGCCATTCGACCAATCTCTACAGATGTCCCATCTGCCGGGAAGGATTCGCGGTGGAGTTTCTCTTGGACCGACACATCGCCCAGGCTCATCATGCCACTCAGGACCATCAGGTACCATCCGTCAGAAGTAACTCGAGAGAGAACGGGCGCGTTCATCGAACGGCTAGAAATCAGGAAGAAACGAAGTCTCTGAAGAGACGTTCACCAGCATCGAGTAACAACAATTCCCTGAATCAGCGCGACAACAACAAACGTGCAAACTATGGTACTTCCGGACAGCAGTGCGAGCTCTGCGAACGCGGCGAGTTTGCGAACGAGGCCGAGCTGCAGGCACACAAGAAACTGGCTCACCAAACGCCTCCTAAACTGTCCAGTAAAAGTTTATCTACCTTGAATACCCTAACGTGCGGTTATTGCGGCGAGGTTTGTCGTTCGCGAAACGAACTAGAGTCGCACACGAGGATTCAACACGTGTCCAACGAGCCCGGCGGACGTCACAAGTGCAACATCTGCGACGAGGTATGCTTGTCCAGCACGACTTTGGCCGAACACAAGCTCCAGAAGCACTGCAAGATACAACTGAGCGATACGTGCGTGGTATGTCGTGGTTGCCTGACCTCGGAGAGTCAATTCCTGGATCACGTGCAAAGGCATAGCTTGGAAAACGTGGACCCGCAACAACGATTGGACAACTCTTTACCTCATTTACCCGCCCCGTGCGTTGTTTGCCGGCAGACGCTAATCAGCGAATTAGAGTGTCGTTTGCATGCACGGCATCATCTACGGACGTCTTCAGGATCGCGCAGCGCCGTTTCTAGTCCGACCAGTCCCGGTGGCGGCAAAACTCAGAGCCAAGGTTGCTGTCTCTGTTTGCGCGATTTTGCTGCCGATGATTTCGTCAGCCTGCCACCCAATCCTGCCAGTACGAGTGGACAACCACTCAAGGTCTGCAAAACCTGCTACATGCGACATTCTCAGGGATTGCCTATCCTGAACTCGACGACCTATGAGCGGGCCAAGTACGATATGACCTGGTTCGCAAGCAAGAATGGTCAATGGGATAGTTCCAAGGACAAATGGGATGACAGAGGACTCAATGTAGAGAATCGATCCAGAAATGAAGGAAACACGGATAAAAAACGCTGTGAGGAGTGCGGGGTGAAGTTCGAAGATCCTGAAGAGGCGGAGAAACACAGAATCACAGAACATGAAAAGATTAGCACTAGTGGTTCGAAACCCTCCTATACATGTATACAGTGTCAGGTTAGTGTATCATTTCCAACCGAAGCCAAAATTCAGCAACATGTGAGAAAGGAACATCTGGAAACATCCAAGAGAGCTTCCTTGGAAGCCTTGCGATGTCATTTGTGCTCATTTGAAGCTGCCAGTCCTATGCAACTGCAAATTCACTTAATAGAACATACTTTTGTTGGCTGCGCTGCGCTCAGCTGTTACCTCTGTCAGTCGCTTTTCACAACTCCTATTGGTCTTCAGAGTCACCTGCTACAGGAACACGGTCTGGGCGCGCGACCTTACGATTGCCGCAAGTGCACGCTCAAGTTCTTCTTCAACGCGGAGCTAGACCACCACATATTGACTTTCCATCGTCCAAGGGATGAGATTCATCCTTCGTCAGTCGAGAATGCTCGCGAGATGAAGAATCGCGAGCCCGACGGCGGTGTAACGGTGAAGGAGGAAGTGATGCAAGGTGGCaaagaagaggaggaggaggaggaagtgAACGTGGACGATCAGATAGGACAGGAGGAACATGATGAAGCTAAACGAGAGGAGCAGAAGTTGAAGACGGAAGTAGATATCGAGACGACATCCAACAAAATGGAATCGTGA
Protein Sequence: MLKDMRNGREALGTGSSSWHSEDGGPNSRRGGETPSSCATPTSASFPSEPEVDADVNPDGTNPAAPYPCQFCDRKFPRLSYLKKHEQSHGDQMPYQCSWCNRLFKHKRSRDRHVKLHTGDRRYRCSKCEAAFSRSDHLKIHLKTHDTQRPYQCTACTRGYSTAAALTAHMQSHKKHQSSSSSQSAGLKLQDVDYGRRSVSSHSTSSPPVPSSPSPSLNLSLNPRNVLKTSQGTGSASTTPVLSSPLKLTCMYCTRDSFSCMQQLQMHVHTMHQAILSGAEGPARPPSPSRTSSEQQATVCKQLDRQDVAKESRLDRKYPTSEDRGDRSAVERDHYENGFTCNQCTMKFSTLTLLRDHCVEHRIDVSTAMMMCPLCSIPCSSAASYAEHYVLQHCENRRPAPTHAIDYGETKLNGGIYDGTARDPSRISRTRDAPEAADLTNKHSTRSSSDTAGSYTADTLLCGQCGAALKDFESFREHVARHLQADHRNQEMSGRQHLCPKCEAIFSDREDMLVHLTKHYLGQVSKEYACSACKKLYPHPDQLQRHLLDVHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRVYRCSTCAVSNNENSPPGGNVTASGEGRSFFRTEAELAAHVRSVHAPPPAVSLMNSSPVGAARSPASTPGGGIAARCFFCGICCGSDLELQLHLASHSTNLYRCPICREGFAVEFLLDRHIAQAHHATQDHQVPSVRSNSRENGRVHRTARNQEETKSLKRRSPASSNNNSLNQRDNNKRANYGTSGQQCELCERGEFANEAELQAHKKLAHQTPPKLSSKSLSTLNTLTCGYCGEVCRSRNELESHTRIQHVSNEPGGRHKCNICDEVCLSSTTLAEHKLQKHCKIQLSDTCVVCRGCLTSESQFLDHVQRHSLENVDPQQRLDNSLPHLPAPCVVCRQTLISELECRLHARHHLRTSSGSRSAVSSPTSPGGGKTQSQGCCLCLRDFAADDFVSLPPNPASTSGQPLKVCKTCYMRHSQGLPILNSTTYERAKYDMTWFASKNGQWDSSKDKWDDRGLNVENRSRNEGNTDKKRCEECGVKFEDPEEAEKHRITEHEKISTSGSKPSYTCIQCQVSVSFPTEAKIQQHVRKEHLETSKRASLEALRCHLCSFEAASPMQLQIHLIEHTFVGCAALSCYLCQSLFTTPIGLQSHLLQEHGLGARPYDCRKCTLKFFFNAELDHHILTFHRPRDEIHPSSVENAREMKNREPDGGVTVKEEVMQGGKEEEEEEEVNVDDQIGQEEHDEAKREEQKLKTEVDIETTSNKMES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01406753;
90% Identity: iTF_00868309;
80% Identity: -