Basic Information

Insect: Cataglyphis niger
Gene Symbol: znf423
Assembly: GCA_004329405.1
Location: SJPC01003597.1:6369-13049[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.2 8.2e+02 2.7 1.6 12 23 32 43 31 43 0.93

2 19 2.6e-05 0.018 17.3 0.1 1 23 49 71 49 71 0.99

3 19 9.8e-05 0.068 15.5 1.1 1 23 238 261 238 261 0.97

4 19 0.28 2e+02 4.6 0.1 2 23 272 294 271 294 0.89

5 19 0.17 1.2e+02 5.3 0.1 3 23 363 383 362 383 0.97

6 19 0.00052 0.36 13.2 0.4 3 23 399 419 397 419 0.95

7 19 0.0013 0.89 12.0 0.4 1 23 428 451 428 451 0.93

8 19 1.5 1.1e+03 2.3 0.2 1 23 456 479 456 479 0.91

9 19 1.2 8.1e+02 2.7 2.2 2 23 560 581 560 581 0.96

10 19 0.0021 1.5 11.3 0.1 1 23 586 609 586 610 0.94

11 19 1.3 9.3e+02 2.5 0.1 2 23 673 696 672 696 0.81

12 19 5.1e-05 0.035 16.4 0.9 2 23 714 736 713 736 0.96

13 19 0.18 1.3e+02 5.2 2.6 1 23 745 768 745 768 0.92

14 19 0.38 2.6e+02 4.2 1.0 2 23 776 797 775 797 0.96

15 19 0.00084 0.58 12.6 0.1 2 23 960 982 959 982 0.96

16 19 0.056 39 6.8 0.3 1 23 994 1017 994 1017 0.95

17 19 0.11 75 5.9 0.2 2 23 1030 1051 1029 1051 0.95

18 19 0.14 99 5.5 0.2 2 23 1060 1082 1059 1082 0.93

19 19 0.0023 1.6 11.2 1.9 1 23 1089 1112 1089 1112 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.2	8.2e+02	2.7	1.6	12	23	32	43	31	43	0.93
2	19	2.6e-05	0.018	17.3	0.1	1	23	49	71	49	71	0.99
3	19	9.8e-05	0.068	15.5	1.1	1	23	238	261	238	261	0.97
4	19	0.28	2e+02	4.6	0.1	2	23	272	294	271	294	0.89
5	19	0.17	1.2e+02	5.3	0.1	3	23	363	383	362	383	0.97
6	19	0.00052	0.36	13.2	0.4	3	23	399	419	397	419	0.95
7	19	0.0013	0.89	12.0	0.4	1	23	428	451	428	451	0.93
8	19	1.5	1.1e+03	2.3	0.2	1	23	456	479	456	479	0.91
9	19	1.2	8.1e+02	2.7	2.2	2	23	560	581	560	581	0.96
10	19	0.0021	1.5	11.3	0.1	1	23	586	609	586	610	0.94
11	19	1.3	9.3e+02	2.5	0.1	2	23	673	696	672	696	0.81
12	19	5.1e-05	0.035	16.4	0.9	2	23	714	736	713	736	0.96
13	19	0.18	1.3e+02	5.2	2.6	1	23	745	768	745	768	0.92
14	19	0.38	2.6e+02	4.2	1.0	2	23	776	797	775	797	0.96
15	19	0.00084	0.58	12.6	0.1	2	23	960	982	959	982	0.96
16	19	0.056	39	6.8	0.3	1	23	994	1017	994	1017	0.95
17	19	0.11	75	5.9	0.2	2	23	1030	1051	1029	1051	0.95
18	19	0.14	99	5.5	0.2	2	23	1060	1082	1059	1082	0.93
19	19	0.0023	1.6	11.2	1.9	1	23	1089	1112	1089	1112	0.97

Sequence Information

Coding Sequence: ATGAATAATTCACGCGCAAAGTGCAGGAGTAAATTCGCCGTCTGTCTTCGTTTCGGCGAGTCGGGACAGCTCGCTGACCGTTCGCTCGCTCAAACCTCCGATCACCTGAAGATCCACTTGAAAACGCACGACACCCAGAGGCCTTACCAATGCACAGCTTGCACGAGAGGCTACAGTACAGCCGCAGCTTTAACGGCGCACATGCAATCTCACAAGAAACATcaatcatcgtcgtcgtctcaATCGGCCGGTCTCAAGCTTCAGGACGTCGACTATGGTAGGAGAAGCGTATCCTCGCACAGCACGTCGTCACCGCCGGTaccgtcgtcgccgtcgccgtcatTGAATCTCAGTTTGAATCCGAGGAACGTCCTGAAGACGTCGCAGGGCACCGGAAGCTCCTCCACCACTCCGGTTCTCAGCTCGCCCCTGAAACTCGCCTGCATGTACTGCACCCGGGACTCGTTCAGTTGCATGCAACAGCTGCAGATGCACGTGCACACGATGCATCAGGCGATTCTGAGCGGCGCGGAAGGTCCGACTCGGCCACCATCGCCGAGCAGAATATCGTCTAGCGAGCAGCAGGCGCCTGCTTGCAAGCCGCTGGATCGTCAGGACGTCACGAAGGAACCGCGACTGGATCGCAAGTATCCGACATCCGAGGATCGAGGCGACAGACCGGCTGCCGAGCGGGATCATTACGAGAACGGGTTCACCTGCAACCAATGCACCATGAAGTTTTCTACGTTGACCCTCCTTCGCGATCATTTGTTGTCGATACACCGAATCGACGGTTTCGGCGCGGCGATGATGATGTGTCCCTTGTGCAGTATACCGTGTTCATCGGCGGCTTCCTACGCCGAGCACTACGTCCTTCAGCATTGTGAGAATCGCCGACCGGCGCCGACGCACGTTCTAGATTACGGGGAAACGAAGCTGAACGGCGGCATTTACGATGGTACCGCGAGAGATCCCTCCCGGGTATCGAGAACCCGGGACGCGCCGGAAGCCGCCGATCTCACGAATAAGCACTCGACCAGATCTTCTTCAGATGCCACCGGCGGTTACACAGCTGATACACTGCTATGCGGTCAATGTGGTGCCGCGTTAAAAGACTTCGAATCTTTCCGCGAGCATGTGGCGCGACACTTGCAGGCCGATCATCGTAACCAAGAGATGTCCAGGCAACATTTATGTCCCAAATGCGATGCCATCTTCTCGGATCGCGAAGATATGTTGGCCCATCTGACAAAGCACTATCTAGGCCAGGTCAGCAAAGAGTACGCCTGCAGTGCCTGCAAAAAGCTTTATCCGCATCCAGATCAACTTCAGAGGCATCTTTTGGACGTGCACGCACATCATCTGTACCGTTGCGCTCTGTGCCGGGACACCTTCGACTCCAGAGTAGCGATACAGGTGCATTTTGCGGTGAAGCACAGCCAGGAATGTCGGATCTATCGGTGCAGCACGTGCGCTGTGTCCAACAACGAAAACTCACCGCCGGGAACAAATGCGGTGGCTTCCGGCGAAGGTAGGAGCTTCTTCAGGAGTGAGGCCGAAATGGCGGCGCACGTGCGTAGTGTGCACGCGCCTCCACCTGCAGCCTCTCTGATGAATAGTAGCCCGGTGGGTGCCGCGAGAAGCCCGGCCTCGACGCCCGGTGGTAGCGTCGCGGCGCGTTGTTTCTTTTGCGGGATCTGTTGCGGTTCAGATCTCGAACTCCAGCTTCATTTAGCCAGCCATTCGACTAATCTCTACAGATGTCCCATCTGCCGGGAAGGTTTCGCGGTGGAGTTTCTCTTGGACCGACACATCGCCCAAGCTCATCACACGACCCAGGATCATCAGGTACCATCCGTCAGAAATAACTCGAGAGAGAATGGGCGTGTTCATCGAACAGCCAGAAATCAGGAGGAAaCAAAATCTCTGAAAAGACGTTCACCAGCATCGAGTAACAATAATTCCTTAAATCAGCGCGACAATAACAAACGTGCAAATTATGGTACTTCCGGACAGCAGTGCGAGCTCTGCGAACGTGGCGAATTCGCAAATGAAGCCGAGCTACAGGCACATAAAAAATTGGCTCACCAAACGCCTCCTAAACTGTCCAGTAAGAGTCTATCCACTTTGAATACTCTGACGTGTGGTTATTGCGGCGAGGTTTGTCGTTCGCGAAACGAGCTGGAATCGCACACGAGGATCCAACACGCGTCCAACGAACCCGGTGGACGTCACAAGTGCAACATCTGCGATGAGGTATGCTTGTCGAGCACGACTTTGGCCGAGCACAAGCTCCAGAAGCACTGCAAGATACAACTGAGCGACACGTGCGTGGTATGTCGTGGTTGCTTGACCTCAGAGAGTCAATTCCTGGATCACGTGCAAAGGCATAGCTTGGAAAACGTAGACCCGCAACAACGACTGGATAATTCTTTACCTCATTTACCCGCTCCGTGCGTCGTTTGCCGGCAGACGCTAATCAGCGAACTAGAGTGTCGTTTGCATGCGCGGCATCATCTACGGACGTCTTCGGGATCGCGCAGCGCCATTTCTAGTCCGACCAGTCCCGGTGGTGGGAAAACTCAGAACCAGGGTTGTTGTCTCTGTTTGCGCGATTTTGCTGCCGATGATTTCGTCAGTCTGCCACCCAATCCTGCCAGTACGAGCGGACAACCGCTTAAGGTCTGCAAACTCTGCTATATGCGACACTCTCAGGGATTGCCTATCCTGAACTCAACGACTTATGAGCGGGCCAAGTACGATACGGCCTGGTTCGCAAGCAAGAATGATCAATGGGACAGTTCTAAGGACAAGTGGGATGACAGAGCACTCAACGTGGAGAATCGATCtagaaatgaagaaaacacGGATAAAAAACGCTGTGAGGAGTGCGGAGTGAAGTTCGAAGATCCCGAAGAGGCGGAGAAACATAGAATCACAGAACATGAAAAGATCAGCAATAGTGGTTCGAAAACCTCCTATACATGTATACAGTGCCAAgTATCATTTCCAACCGAAGCCAAAATTCAGCAACACGTGAGAAAGGACCATCTGGAAACGTCTAGAAGAGCTTCCCTGGAAGCCTTGCGGTGTCATTTGTGCTCATTTGAAGCTGCCAGTCCTATGCAACTGCAAATTCACTTAATAGAACATACTTTTGTTGGCTGCGCTGCGCTCAGCTGTTACCTTTGTCAGTCGCTCTTCACAACTCCTATTGGTCTTCAGAGTCACCTGCTACAGGAACACGGTCTGGGCGCGCGACCGTACGATTGCCCCAAGTGCACGCTCAAGTTCTTTTTCAATGCGGAACTAGACCATCATATATTGACTTTCCACCGTCCGAGGGACGAGATTCATCCCTCGTTGGCTGAGAACGGTCGCGAGATGAAGAATTGTGAGCCCGACGGCGGTGTAACTGTGAAAGAGGAAGTGATGCAAGGTGGcaaagaagaggaggaggaggaagaagtgaACGTGGACGATCAGATAGGACAGGAGGAACACGAAGCTAAACAAGAGGAGCAGAAGTTGAAGACGGAAGTAGATATCGAGACGACATCCAATAAAATGGAATCGTGA
Protein Sequence: MNNSRAKCRSKFAVCLRFGESGQLADRSLAQTSDHLKIHLKTHDTQRPYQCTACTRGYSTAAALTAHMQSHKKHQSSSSSQSAGLKLQDVDYGRRSVSSHSTSSPPVPSSPSPSLNLSLNPRNVLKTSQGTGSSSTTPVLSSPLKLACMYCTRDSFSCMQQLQMHVHTMHQAILSGAEGPTRPPSPSRISSSEQQAPACKPLDRQDVTKEPRLDRKYPTSEDRGDRPAAERDHYENGFTCNQCTMKFSTLTLLRDHLLSIHRIDGFGAAMMMCPLCSIPCSSAASYAEHYVLQHCENRRPAPTHVLDYGETKLNGGIYDGTARDPSRVSRTRDAPEAADLTNKHSTRSSSDATGGYTADTLLCGQCGAALKDFESFREHVARHLQADHRNQEMSRQHLCPKCDAIFSDREDMLAHLTKHYLGQVSKEYACSACKKLYPHPDQLQRHLLDVHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCSTCAVSNNENSPPGTNAVASGEGRSFFRSEAEMAAHVRSVHAPPPAASLMNSSPVGAARSPASTPGGSVAARCFFCGICCGSDLELQLHLASHSTNLYRCPICREGFAVEFLLDRHIAQAHHTTQDHQVPSVRNNSRENGRVHRTARNQEETKSLKRRSPASSNNNSLNQRDNNKRANYGTSGQQCELCERGEFANEAELQAHKKLAHQTPPKLSSKSLSTLNTLTCGYCGEVCRSRNELESHTRIQHASNEPGGRHKCNICDEVCLSSTTLAEHKLQKHCKIQLSDTCVVCRGCLTSESQFLDHVQRHSLENVDPQQRLDNSLPHLPAPCVVCRQTLISELECRLHARHHLRTSSGSRSAISSPTSPGGGKTQNQGCCLCLRDFAADDFVSLPPNPASTSGQPLKVCKLCYMRHSQGLPILNSTTYERAKYDTAWFASKNDQWDSSKDKWDDRALNVENRSRNEENTDKKRCEECGVKFEDPEEAEKHRITEHEKISNSGSKTSYTCIQCQVSFPTEAKIQQHVRKDHLETSRRASLEALRCHLCSFEAASPMQLQIHLIEHTFVGCAALSCYLCQSLFTTPIGLQSHLLQEHGLGARPYDCPKCTLKFFFNAELDHHILTFHRPRDEIHPSLAENGREMKNCEPDGGVTVKEEVMQGGKEEEEEEEVNVDDQIGQEEHEAKQEEQKLKTEVDIETTSNKMES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01406753;
90% Identity: iTF_00868309;
80% Identity: -